Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 447,812 T→C T79A (ACG→GCG)  cyoD ← cytochrome bo3 ubiquinol oxidase subunit 4

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913447,8120TC100.0% 498.2 / NA 138T79A (ACG→GCG) cyoDcytochrome bo3 ubiquinol oxidase subunit 4
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (84/54);  total (84/54)

Only 100 of 142 total aligned reads displayed.

TTACTTGCAGGTATTGCTTAAACATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGTCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGTCATCACCATCCAG  >  NC_000913/447678‑447948
                                                                                                                                      |                                                                                                                                        
ttACTTGCAGGTATTGCTTATACATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAACGATGATTAGCACGGCGAAGACAAACGCCGCCATGt                                                                                                                                     >  2:2070808/1‑140 (MQ=255)
ttACTTGCAGGTATTGCTTAAACATCATAACCGCCGCTCTTAGTGCGTCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGt                                                                                                                                     >  1:1285390/1‑140 (MQ=255)
ttACTTGCAGGTATTGCTTAAACATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGAGTAGTACAGTGAAGTCAAACGCCGCCATGt                                                                                                                                     >  1:1029995/1‑140 (MQ=255)
                tttAAATATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGa                                                                                                                     <  2:1329583/139‑1 (MQ=255)
                cTTAAACATCATAACCGGTGCTGTTAGTGCATCATCATGTTGTAGTTGTGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGa                                                                                                                     <  2:860391/140‑1 (MQ=255)
                  tAAACATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCGACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGAtt                                                                                                                   >  1:1652953/1‑140 (MQ=255)
                    aaCATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTg                                                                                                                 >  2:339958/1‑140 (MQ=255)
                    aaCATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTg                                                                                                                 >  1:145444/1‑140 (MQ=255)
                     aCATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAAAGCCGCCATCTTCCCGCCTTCATCTGATTTgg                                                                                                                >  2:1000542/1‑140 (MQ=255)
                     aCATAATAACCGCCGGTCTTAGGGCGTCAGCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCTTCTGATTTgg                                                                                                                <  1:967592/140‑1 (MQ=255)
                         catAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCAGGGTGAAGATAAATGCCTCCATGTTCCAGCCATCATCTGATTTGGTAtt                                                                                                            >  2:783375/1‑140 (MQ=255)
                         catAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTAtt                                                                                                            >  2:1903416/1‑140 (MQ=255)
                             aCCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCAtg                                                                                                        >  1:100863/1‑140 (MQ=255)
                               cgccgcTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCAtgtg                                                                                                      >  1:1697193/1‑140 (MQ=255)
                                gccgcTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCCCGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGc                                                                                                     >  1:2234954/1‑140 (MQ=255)
                                 ccgcTCTTAGTGCATTATCATGATGTAGTTGAGGTTCTACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCa                                                                                                    <  1:861933/140‑1 (MQ=255)
                                 ccgcTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCa                                                                                                    >  2:1591278/1‑140 (MQ=255)
                                 ccgcTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCa                                                                                                    <  2:1697193/140‑1 (MQ=255)
                                   gcTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAgg                                                                                                  >  1:2296781/1‑140 (MQ=255)
                                     tctTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGaa                                                                                                <  2:1652953/140‑1 (MQ=255)
                                      ctTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTAt                                                                                                             <  1:1252596/126‑1 (MQ=255)
                                      ctTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTAt                                                                                                             >  2:1252596/1‑126 (MQ=255)
                                       ttAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGc                                                                                              <  1:122913/140‑1 (MQ=255)
                                              atcatcatGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAg                                                                                       <  2:1718255/140‑1 (MQ=255)
                                               tcatcatGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGa                                                                                      >  1:1566666/1‑140 (MQ=255)
                                               tcatcatGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCATCAACAGTCTTGGTATTCATGAACAGGAAGAACACCAGa                                                                                      >  2:1211736/1‑140 (MQ=255)
                                                catcatGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGAt                                                                                     <  1:2293208/140‑1 (MQ=255)
                                                catcatGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGAt                                                                                     <  2:1943265/140‑1 (MQ=255)
                                                     tgttgtAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCAcc                                                                                >  2:557139/1‑140 (MQ=255)
                                                     tgttgtAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCAcc                                                                                >  1:342727/1‑140 (MQ=255)
                                                      gttgtAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCa                                                                               <  1:339958/140‑1 (MQ=255)
                                                      gttgtAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCa                                                                               <  2:2296781/140‑1 (MQ=255)
                                                       ttgtAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAg                                                                              >  1:460056/1‑140 (MQ=255)
                                                        tgtAGTTGAGGTTCCACATAATCCAGATGGAGTCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGa                                                                             <  2:2456735/140‑1 (MQ=255)
                                                          tAGTTGAGGTTCCACATAATCCAGATGGATCCTACAAACAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAAc                                                                           <  1:817429/140‑1 (MQ=255)
                                                          tAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGTTTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCa                                                                               <  2:2078343/136‑1 (MQ=255)
                                                          tAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAAc                                                                           >  1:2431985/1‑140 (MQ=255)
                                                          tAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAAc                                                                           >  2:2042885/1‑140 (MQ=255)
                                                          tAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAAc                                                                           >  2:35109/1‑140 (MQ=255)
                                                            gTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGAt                                                                                     >  1:1408624/1‑128 (MQ=255)
                                                            gTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGAt                                                                                     <  2:1408624/128‑1 (MQ=255)
                                                            gTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCt                                                                         >  1:81611/1‑140 (MQ=255)
                                                                gggTTCCACATAATCCATATGGCGCCTACAAGCAGGATACCGATGATTGGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTAc                                                                     <  2:861548/139‑1 (MQ=255)
                                                                aGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTAc                                                                     >  1:1825845/1‑140 (MQ=255)
                                                                aGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTAc                                                                     <  2:1674810/140‑1 (MQ=255)
                                                                  gTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGa                                                                             <  2:296320/130‑1 (MQ=255)
                                                                  gTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGa                                                                             >  1:296320/1‑130 (MQ=255)
                                                                  gTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATATGCAGGAAGCATACTAGATGCTCCAGAACCTGTACCa                                                                   >  1:1157774/1‑140 (MQ=255)
                                                                    tCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTTAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACt                                                                 >  1:2139936/1‑140 (MQ=255)
                                                                    tCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTg                                                                        <  2:1096079/133‑1 (MQ=255)
                                                                    tCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACt                                                                 >  2:1383997/1‑140 (MQ=255)
                                                                       acaTAATCCAGATGGAGCCTACAACCAGGATAGCGCTGAGTAGCACGGGGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGcc                                                              <  2:936305/140‑1 (MQ=255)
                                                                       acaTAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGcc                                                              <  1:1358809/140‑1 (MQ=255)
                                                                       acaTAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGcc                                                              <  1:35109/140‑1 (MQ=255)
                                                                       acaTAATCCAGATGGAGACTACCACCAGGATTGCGGTGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGcc                                                              <  2:1099428/140‑1 (MQ=255)
                                                                          tAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCAtt                                                           <  2:1227230/140‑1 (MQ=255)
                                                                            aTCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGc                                                         >  2:391861/1‑140 (MQ=255)
                                                                            aTCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGc                                                         >  2:1624661/1‑140 (MQ=255)
                                                                             tCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGcc                                                              <  1:1668306/134‑1 (MQ=255)
                                                                             tCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGcc                                                        >  2:1470499/1‑140 (MQ=255)
                                                                              ccAGATGGAGCCTACAACCAGGCTACCGAGGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCa                                                       <  1:1000542/140‑1 (MQ=255)
                                                                                 gATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACCCCATATGTCCCAGAACATGTAGAACTGCCAGTGCCAGGa                                                    >  2:1192316/1‑140 (MQ=255)
                                                                                 gATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGa                                                    >  2:1723729/1‑140 (MQ=255)
                                                                                  aTGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGAt                                                   >  1:2346665/1‑140 (MQ=255)
                                                                                   tGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGAtt                                                  <  1:391861/140‑1 (MQ=255)
                                                                                   tGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGAtt                                                  >  1:1568688/1‑140 (MQ=255)
                                                                                   tGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGAtt                                                  <  1:1739547/140‑1 (MQ=255)
                                                                                       gCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTc                                              >  1:1583993/1‑140 (MQ=255)
                                                                                       gCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTc                                              >  1:274357/1‑140 (MQ=255)
                                                                                        ccTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTcc                                             <  1:1383997/140‑1 (MQ=255)
                                                                                        ccTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTcc                                             >  2:313645/1‑140 (MQ=255)
                                                                                        ccTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTcc                                             >  2:21430/1‑140 (MQ=255)
                                                                                           aCAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAg                                          >  2:2371356/1‑140 (MQ=255)
                                                                                                       gCGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCgg                              >  1:1944994/1‑140 (MQ=255)
                                                                                                        cGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGga                             >  1:41303/1‑140 (MQ=255)
                                                                                                        cGATGATTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGga                             >  2:2408217/1‑140 (MQ=255)
                                                                                                        cGATGATTAGCACGGTGAAGACAAACGCCGCCATG‑TCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGgag                            >  1:2085328/1‑140 (MQ=255)
                                                                                                         gatgatTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGACAGGATAGTTCCCGGAATTACGGCCGgag                            >  1:874660/1‑140 (MQ=255)
                                                                                                          atgatTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGgaga                           <  1:313645/140‑1 (MQ=255)
                                                                                                           tgatTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGagag                          >  2:222539/1‑140 (MQ=255)
                                                                                                           tgatTAGCACGGTGAAGACAAACGCCGCCATG‑TCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAgg                         <  2:2085328/140‑1 (MQ=255)
                                                                                                            gatTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAgg                         <  2:342727/140‑1 (MQ=255)
                                                                                                             atTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCgg                              <  1:1877257/134‑1 (MQ=255)
                                                                                                             atTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCgg                              >  2:1877257/1‑134 (MQ=255)
                                                                                                             atTAGCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGc                        >  1:2430686/1‑140 (MQ=255)
                                                                                                                 gCACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCt                    <  2:2413642/140‑1 (MQ=255)
                                                                                                                  cACGGTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTc                   <  2:1285390/140‑1 (MQ=255)
                                                                                                                      gTGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGt               <  2:274357/140‑1 (MQ=255)
                                                                                                                      gTGAAGACAAACGCCCCCATGTTCCTGCCTTCATCTGTTTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGt               <  1:1211736/140‑1 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCTATTGCCAGGATTATTCCCAGAATTAAGGCCAGAGAGGCAGCTCCTGtc              >  2:875200/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGTCAGCCAGCTTCTGtc              >  2:2381696/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtc              >  2:1324159/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtc              >  2:1684047/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtc              >  2:582873/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtc              >  1:574629/1‑140 (MQ=255)
                                                                                                                       tGAAGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtc              >  2:129607/1‑140 (MQ=255)
                                                                                                                         aaGACAAACGCCGCCCTGTTCCTGCGTTCGTCTGATTGGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtcat            <  1:875200/140‑1 (MQ=255)
                                                                                                                         aaGACAAACGCCGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGtcat            >  2:1370324/1‑140 (MQ=255)
                                                                                                                                 cgccgcCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGAAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGTCGGAGAGGCAGCTCCTGTCATCACCATcc    >  1:2162106/1‑140 (MQ=255)
                                                                                                                                   ccGCCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGTCATCACCATCCAg  <  2:2294327/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                        
TTACTTGCAGGTATTGCTTAAACATCATAACCGCCGCTCTTAGTGCATCATCATGTTGTAGTTGAGGTTCCACATAATCCAGATGGAGCCTACAACCAGGATAGCGATGATTAGCACGGTGAAGACAAACGCCGTCATGTTCCAGCCTTCATCTGATTTGGTATTCATGTGCAGGAAGCACACCAGATGCACCAGAACCTGTACCACTGCCATTGCCAGGATTGTTCCCAGAATTACGGCCGGAGAGGCAGCTCCTGTCATCACCATCCAG  >  NC_000913/447678‑447948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑