| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,852,208 | C→T | A193T (GCC→ACC) | ilvB ← | acetohydroxy acid synthase I subunit IlvB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,852,208 | 0 | C | T | 97.2% | 375.7 / NA | 142 | A193T (GCC→ACC) | ilvB | acetohydroxy acid synthase I subunit IlvB |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (56/81); minor base G (4/0); total (60/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 152 total aligned reads displayed.
AGTTGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGCGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGG > NC_000913/3852072‑3852343 | aGTTGCGCTTTCTCCGCCAGTTCACGCACCCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCAGCGTCACTAATTCTTTCTTCGGTAAAGGCGGGggtgg > 1:788498/1‑140 (MQ=255) gTTGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGggtggcg > 1:540474/1‑140 (MQ=255) ttGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGggtggcgg < 1:1318224/140‑1 (MQ=255) ttGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGggtggcgg > 2:617149/1‑140 (MQ=255) ttGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGggtggcgg > 2:1446431/1‑140 (MQ=255) gcgcTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCt < 1:1603101/140‑1 (MQ=255) tctcCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCt > 2:1613399/1‑140 (MQ=255) ctcCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTg < 1:108371/140‑1 (MQ=255) ccGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGATAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGcc < 1:1759669/140‑1 (MQ=255) gTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCg < 2:235951/140‑1 (MQ=255) ttCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAGTGCTTTCTGCGCTATATGCGGGGGGAGCGGAATTTTCTGACATAGCgg > 2:1120829/1‑140 (MQ=255) ttCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCgg > 2:1483545/1‑140 (MQ=255) ttCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCgg > 2:452502/1‑140 (MQ=255) tCACGCA‑CCCGTGCGGGCGCATTGATCACCCCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCggg < 1:2020806/140‑1 (MQ=255) tCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCggg < 2:1693234/140‑1 (MQ=255) aCGCA‑CCCGTGCGGGCGTATTGCTCACACCGCCGCACAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCt < 2:902013/140‑1 (MQ=255) aCGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCt < 2:582783/140‑1 (MQ=255) ccGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGttt > 1:1634789/1‑140 (MQ=255) cGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTc > 1:2166240/1‑140 (MQ=255) gTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCa < 1:2185173/140‑1 (MQ=255) gTGCGGGCACATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCa < 2:217167/140‑1 (MQ=255) gcgcATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGttt < 2:1744456/132‑1 (MQ=255) gcATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCggg < 2:1296568/122‑1 (MQ=255) gcATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCggg > 1:1296568/1‑122 (MQ=255) cacaCCGCCGCCCAGATAAAGCCCCGGGCGTCTGGAAGCATTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCg < 2:770231/140‑1 (MQ=255) cacaCCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACt < 1:90305/136‑1 (MQ=255) cacaCCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACt > 2:90305/1‑136 (MQ=255) cacaCCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCg > 2:299142/1‑140 (MQ=255) cacaCCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCAGCCATAGTGGGCTGCGTTTCACTCTCAAAAACTGCCg > 1:782096/1‑140 (MQ=255) acCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCAATAGCGGGCTGGGTTTCAATCCCAAAAACTGCCGttt > 1:1112553/1‑140 (MQ=255) ccgccgCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACt < 1:2204372/132‑1 (MQ=255) ccgccgCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACt > 2:2204372/1‑132 (MQ=255) ccgccgCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTg > 1:2287185/1‑140 (MQ=255) cgccgcCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGc > 2:1618826/1‑140 (MQ=255) gccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca > 2:42385/1‑140 (MQ=255) gccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca < 1:452502/140‑1 (MQ=255) ccgccCAGATAAAGCACGGGGCCTTTGGCAGTGTTCATCTTCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:732225/140‑1 (MQ=255) ccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 1:1538039/140‑1 (MQ=255) ccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:117646/140‑1 (MQ=255) ccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:619938/140‑1 (MQ=255) ccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 1:299142/140‑1 (MQ=255) ccgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:2287185/140‑1 (MQ=255) ccgccCAGATAAAGCACAGGGCGTTTGGCAGGGGTAATCGTCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:1112553/140‑1 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcaca > 2:1482155/1‑140 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcaca > 1:1363546/1‑140 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcaca > 2:1924265/1‑140 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca > 2:935103/1‑138 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca > 2:1557894/1‑138 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca < 1:935103/138‑1 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca < 1:1557894/138‑1 (MQ=255) cgccCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGGGGCGGCTTTTTCTGCCATAGCGGGGTTAGTTTCAAGCTCATAAACTGCCTTTTGcaca > 2:1185960/1‑140 (MQ=255) cgccCAGATAAAGCACCCGGCGTTTGGCAGCTTTACTCATCGCCGCTGTGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcaca < 2:1030241/140‑1 (MQ=255) cccAGATAAAGCACCAGGCGTTCGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATc < 1:766654/140‑1 (MQ=255) ccAGATAAAGTACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATcc < 2:1543698/140‑1 (MQ=255) cAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCt < 1:162970/140‑1 (MQ=255) aGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCGGTGTTTCAATCACATAAACTGGCGTTTGCACATCCtt > 1:676508/1‑140 (MQ=255) aGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGGGGCGGCTTTTTCTGACATAGCGGGCTGTGGTTAAATCTCATAAACAACCGTTTGAACATCCtt > 2:1198408/1‑140 (MQ=255) tAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTTCGTCACGACTGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg < 2:788498/140‑1 (MQ=255) tAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg < 2:540474/140‑1 (MQ=255) tAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg < 1:1924265/140‑1 (MQ=255) tAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg < 2:1634789/140‑1 (MQ=255) gCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTGAATCTCAGAAAATGTCGTTTGAACATCCTTAGGAATg > 1:890268/1‑140 (MQ=255) gCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATg < 2:503745/140‑1 (MQ=255) gCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATg < 1:1483545/140‑1 (MQ=255) cACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg < 1:2118134/135‑1 (MQ=255) cACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAgg > 2:2118134/1‑135 (MQ=255) cACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGt < 2:1449699/140‑1 (MQ=255) ccGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGca < 2:303978/123‑1 (MQ=255) cGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTa > 1:170087/1‑140 (MQ=255) gggCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac < 2:258997/122‑1 (MQ=255) gggCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGcac > 1:258997/1‑122 (MQ=255) gggCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTAt > 2:2111412/1‑140 (MQ=255) gggCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTAt > 1:2304183/1‑140 (MQ=255) ggCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGGGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATc > 1:1386338/1‑140 (MQ=255) tttGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTTGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCcaca < 1:1792964/140‑1 (MQ=255) tttGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCcaca > 2:1908006/1‑140 (MQ=255) tttGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCcaca < 1:1689458/140‑1 (MQ=255) ttGGCAGCGTTAATCATCGCCGCTGTGTCTCGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCacac < 1:1053126/140‑1 (MQ=255) ttGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCacac < 1:1908006/140‑1 (MQ=255) ttGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCacac < 1:590224/140‑1 (MQ=255) tAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAATAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTggg > 2:2027550/1‑140 (MQ=255) atcatcGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCGCATCCTTAGGAATGTCTATCCACACCGGGCCTGggcg > 2:354358/1‑140 (MQ=255) cgccgcTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGcc > 1:397583/1‑138 (MQ=255) cgccgcTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTg > 2:55991/1‑140 (MQ=255) tGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTgcg < 2:2189704/140‑1 (MQ=255) tGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTgcg > 2:1683034/1‑140 (MQ=255) tCACGAATGCTTTCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAAt < 1:617149/140‑1 (MQ=255) aTGCTTTCTTCGCTACAGGCGGAGGCGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGaa < 1:1198408/140‑1 (MQ=255) tttCTTCGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCTTGATTGAGCAATGCGGAAGGCa > 1:880710/1‑140 (MQ=255) ttcttcGCTAAAGGCGGGGGTGCCGCCTTTTTCTGCCGTAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCAt < 1:1007959/140‑1 (MQ=255) tcttcGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCAt > 2:396734/1‑139 (MQ=255) tcttcGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCAt < 1:396734/139‑1 (MQ=255) ttcGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGc > 1:2235287/1‑140 (MQ=255) ttcGCTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCAGATTGCGCAATGCGGAAGGCATCGc > 1:749984/1‑140 (MQ=255) gCTAAAGGCGGGGGTTGCGGCTTTTTCTGCCATAGCGTGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCa < 1:720710/140‑1 (MQ=255) cTAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCa > 2:198845/1‑139 (MQ=255) tAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATg < 1:217983/140‑1 (MQ=255) tAAAGGCGGGGGTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATg > 2:84192/1‑140 (MQ=255) tAAAGGCGGGGGTGGAGGCTTTGTCTGCCTTAGCGGGGTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATg < 1:1197971/140‑1 (MQ=255) ggggTGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGACCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCgg < 2:2451108/140‑1 (MQ=255) | AGTTGCGCTTTCTCCGCCAGTTCACGCA‑CCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCACCGGGCGTTTGGCAGCGTTAATCATCGCCGCTGCGTCACGAATGCTTTCTTCGCTAAAGGCGGGGGCGGCGGCTTTTTCTGCCATAGCGGGCTGTGTTTCAATCTCAAAAACTGCCGTTTGCACATCCTTAGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGG > NC_000913/3852072‑3852343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |