| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,864,868 | T→C | Y469C (TAT→TGT) | yidE ← | putative transport protein YidE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,864,868 | 0 | T | C | 99.1% | 371.9 / NA | 108 | Y469C (TAT→TGT) | yidE | putative transport protein YidE |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (41/66); total (42/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
ATTAGCAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCATAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCATAAACC > NC_000913/3864732‑3865003 | attaGCAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAAc < 2:1882164/140‑1 (MQ=255) gCAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAAt > 1:1805157/1‑140 (MQ=255) cAAACGCCAGCGCCGGATGATCCGTCATGGACCCTCCCAACATCCCGCTCATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 2:637580/140‑1 (MQ=255) cAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 1:96740/140‑1 (MQ=255) cAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 1:68598/140‑1 (MQ=255) cAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 1:584805/140‑1 (MQ=255) cAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 1:410931/140‑1 (MQ=255) cAAACGCCAGCGCCGCAGGATCCGTCATGTAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATc < 1:761763/140‑1 (MQ=255) aaCGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCATGGCACCACAACCAATACa > 1:2011779/1‑140 (MQ=255) aaCGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCa > 2:1388114/1‑140 (MQ=255) aCGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAg > 2:351473/1‑140 (MQ=255) aCGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAg > 1:1968833/1‑140 (MQ=255) ccAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCtt > 2:2286393/1‑140 (MQ=255) cgcCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAGTCAGCGGAGCGGGGGTCATCAGGGCTCCACAACCAATCCCGCTTAGcc > 2:761763/1‑140 (MQ=255) cgcCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGcc > 2:1956058/1‑140 (MQ=255) cgcCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGcc < 1:1388114/140‑1 (MQ=255) cGGAGGATCGGTCATGGTACCTCCCAGCATCCCGCCCATTGTCAGGTACTTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCtt < 2:677331/140‑1 (MQ=255) cGGAGGATCGGTCATGGTACCTCCCAGCATCACGCCCATTGTCAGGTAGTTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCtt < 2:1079669/140‑1 (MQ=255) cGGAGGATCGGTCATGGGACCTTCCAGCATCACGCACATAGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCtt < 2:914143/140‑1 (MQ=255) cGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCtt < 1:88614/140‑1 (MQ=255) cGGAGGATAGGTCATGGTACCTTCCAGCATCCCGCCCATTGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAAACAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCtt < 2:1215377/140‑1 (MQ=255) gaggaTCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGTCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCg > 1:2268583/1‑140 (MQ=255) gaggaTCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCg > 1:1975749/1‑140 (MQ=255) gaggaTCGGTCATGGAAACTGCCAGCATCCCCCACCTGGACAGGTAATGCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCg < 2:740461/140‑1 (MQ=255) gaTCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCa < 2:1679437/140‑1 (MQ=255) tCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCAtt < 1:587877/140‑1 (MQ=255) ggTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGa < 2:415356/140‑1 (MQ=255) ggTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGa < 2:1983172/140‑1 (MQ=255) ggTCATGGAACCTGCCACCATCACGCACATGCTCACGTAATTCATTTTCGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGa < 2:665573/140‑1 (MQ=255) cATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCa < 2:2278534/140‑1 (MQ=255) aTGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAg < 2:1491041/140‑1 (MQ=255) aTGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGGGATCAGGGAGCCCCAAACCATCCAGCCTAGTCCTTCCCCCTTGACCAg > 2:1041851/1‑140 (MQ=255) tGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAgg < 2:1805157/140‑1 (MQ=255) tGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAgg < 1:375788/140‑1 (MQ=255) tGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTca > 1:1360506/1‑140 (MQ=255) tGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCATAGACCGTCGCCATTGACCAGGGTATTca > 1:928824/1‑140 (MQ=255) tGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGGGGTCCGGGCACCACAACCCATCCAGCCTAGCCCATCGCCACTGAACAGGGTATTcc > 1:967633/1‑139 (MQ=255) ccAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCCCCACAACCGATCCAGCGTAGCCCTTAGCCATTGACCAGGGGATTcaca > 2:1057198/1‑140 (MQ=255) ccAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTcaca < 2:1966966/140‑1 (MQ=255) ccAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTcaca < 2:1460696/140‑1 (MQ=255) ccAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTcaca > 1:2304971/1‑140 (MQ=255) cATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAAt < 1:1455079/140‑1 (MQ=255) cccGCACATGGTCAGTTAATTCTTTGTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATccc < 1:921716/140‑1 (MQ=255) acaTGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCccacca < 2:1509237/140‑1 (MQ=255) gTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCTGGGTATTCACAAAATCCCCACCAGATTTCAGAc > 2:2487378/1‑140 (MQ=255) aaTTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTAGTCAAAAGATCCCCACCAGATTTCAGACCa > 1:857181/1‑140 (MQ=255) aTTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCaa < 2:2011779/140‑1 (MQ=255) ttCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCATAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTCACAAAATCCCCACCAGATTTCAGACCAAc > 2:84447/1‑140 (MQ=255) ttCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCCGGGGATTAACATAATCCCCACTAGATTTCAGACCAAc > 1:1027541/1‑140 (MQ=255) ttCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAAc > 1:2095508/1‑140 (MQ=255) ttCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAAc > 2:389424/1‑140 (MQ=255) ttCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAAc > 1:1706318/1‑140 (MQ=255) ttGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCga > 1:2488462/1‑140 (MQ=255) ttGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATGGACCAGGGAATTGACATAATCCCCAGCAGAGTTCAGACCAACGACCga > 2:721860/1‑140 (MQ=255) ggCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCgaga < 2:2095508/140‑1 (MQ=255) gCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAAACAATCCAGCCTAGCCCTTCGCCATTTACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGagag > 1:1606673/1‑140 (MQ=255) cTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACAAGGGGATTAACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAgg > 2:916574/1‑140 (MQ=255) tAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGa > 2:1608986/1‑140 (MQ=255) cATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACGAGATTTGAGACCAACGACCGAGAGGAACa > 1:770334/1‑140 (MQ=255) cATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACa < 1:1949974/140‑1 (MQ=255) ccGCGCCAGAATGCCAATAGTATTCAGCGGACCGGCGGTTATCAGGGCTCCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCa < 2:770334/140‑1 (MQ=255) ccGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCa < 1:76633/140‑1 (MQ=255) ccGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCACCACCAGTTTTCAGGCCAACGTCCGAGAGGAACAGCa > 1:703319/1‑140 (MQ=255) cgcgCCAGAATGCCAACTGTAACCAGCGGAACGGCGGTGATCAGGGCAACACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCAc < 2:857181/140‑1 (MQ=255) gcgcCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGaa > 2:1313285/1‑133 (MQ=255) gcgcCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGaa < 1:1313285/133‑1 (MQ=255) aGAATGCCAACAGTAATCAGCGGAACGGCGGCGATCAGGGCACCACAACCAATTCAGCCTAACCCTTCGCCCCTAATCAGGGCATTTACCAAATCCCCACCAGAATTCTGACCCACGGCCGAGAGGAACAACACGATccc > 2:497913/1‑140 (MQ=255) cAGTAATCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGc < 1:1911919/140‑1 (MQ=255) aaTCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAgcg > 1:121303/1‑140 (MQ=255) aaTCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAgcg > 1:227039/1‑140 (MQ=255) aaTCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAgcg > 1:362814/1‑140 (MQ=255) aTCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAgcgc < 1:1852328/140‑1 (MQ=255) aTCAGCGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAgcgc < 1:365401/140‑1 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAggg > 1:1404511/1‑139 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt > 1:167559/1‑140 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt > 1:2185937/1‑140 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt > 1:2125205/1‑140 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt > 2:274440/1‑140 (MQ=255) cGGAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCCCCCGCAGCGCGAggg > 2:555623/1‑139 (MQ=255) ggAACGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGTCATTGACCAGGGGATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGtt > 2:1573846/1‑140 (MQ=255) aaCGGCGGTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGGATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGATCAGTACGATCCCAAGCTACCGCAGCGCGAGGTTgg > 2:707708/1‑140 (MQ=255) cggcggTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt < 2:1917212/135‑1 (MQ=255) cggcggTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGt > 1:1917212/1‑135 (MQ=255) cggcggTGATCAGGGCACCACAACCAATCCAGCTTAGCCCATCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGgcg < 2:1606673/140‑1 (MQ=255) gcggTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGgcgca < 1:330924/140‑2 (MQ=255) gcggTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCt < 2:2125205/140‑1 (MQ=255) gTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTgg < 1:1527206/140‑1 (MQ=255) gTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTgg < 2:362814/140‑1 (MQ=255) gTGATCAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTgg < 1:389424/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGTTTCGCCGTTCGCCAGTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 1:1134904/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 2:121303/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 2:2268583/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 2:2185937/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 1:2431344/140‑1 (MQ=255) cAGGGCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCa < 2:1975749/140‑1 (MQ=255) ggCACCACAACCAATGCAGCTTGGCGCTTCGCCATTGCCCAGGGTATTCACAAAATCCCTACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCATaa < 1:1041851/140‑1 (MQ=255) ggCACCACAACCAATCCAGCTTGGCGCTTCGCCATTGGCCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCATaa < 1:1179686/140‑1 (MQ=255) ggCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTgg < 2:292960/132‑1 (MQ=255) ggCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTgg > 1:292960/1‑132 (MQ=255) ggCACCACAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCATaa < 2:2488462/140‑1 (MQ=255) | ATTAGCAAACGCCAGCGCCGGAGGATCGGTCATGGAACCTGCCAGCATCCCGCACATGGTCAGGTAATTCATTTTGGCTAACATCCGCGCCAGAATGCCAACAGTAATCAGCGGAACGGCGGTGATCAGGGCACCATAACCAATCCAGCTTAGCCCTTCGCCATTGACCAGGGTATTCACAAAATCCCCACCAGATTTCAGACCAACGACCGAGAGGAACAGCACGATCCCCAGCTCCCGCAGCGCGAGGTTGGCGCTTGGCGGCATAAACC > NC_000913/3864732‑3865003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |