BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	460,324	A→G	A479A (GCA→GCG)	lon →	Lon protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	460,324	0	A	G	100.0%	357.6 / NA	101	A479A (GCA→GCG)	lon	Lon protease
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/46); total (55/46)

Only 100 of 102 total aligned reads displayed.

CGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTCGA  >  NC_000913/460189‑460458

  aTCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCgctg                                                                                                                                  >  2:2028849/1‑140 (MQ=255)

     cGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGctgctg                                                                                                                               <  2:1516583/140‑1 (MQ=255)

       gCCTCTGCACTGCTTTAAGTGCTGGGTCCAGAGCAGAGCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             <  1:1069739/140‑1 (MQ=255)

       gCCTCTGCACTGCTTGTAGTGCAGGATCCAGTGGAAAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             <  2:1077688/140‑1 (MQ=255)

       gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             >  1:1077688/1‑140 (MQ=255)

       gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             <  2:1939127/140‑1 (MQ=255)

       gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             <  1:2028849/140‑1 (MQ=255)

       gCCTCTGCACTGCTTCAAGTGCTGGCTCCAGAGCAGATCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGa                                                                                                                             <  1:811697/140‑1 (MQ=255)

         ctctGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATc                                                                                                                           <  2:1535835/140‑1 (MQ=255)

            tGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTa                                                                                                                        >  1:2295041/1‑140 (MQ=255)

             gCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCTACGTCGAACTCCATGAACATTCCGGCGCCg                                                                                                                                     >  1:1539447/1‑126 (MQ=255)

             gCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCg                                                                                                                                     <  2:1539447/126‑1 (MQ=255)

               aCTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATgg                                                                                                                     <  1:1805119/140‑1 (MQ=255)

                   cTTGAAGTGTAGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGt                                                                                                                 >  1:1606938/1‑140 (MQ=255)

                   cTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGTCGCTGCTGGATCGTATGGAAGt                                                                                                                 >  1:817850/1‑140 (MQ=255)

                      gAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAAAAATACGGCGCCGCTGCTGGATCGTATGGAAGTGAt                                                                                                              >  2:1060476/1‑140 (MQ=255)

                         gTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCg                                                                                                           <  2:1267261/140‑1 (MQ=255)

                           gCTGGATCCAGAGCAGAACGTATCGTTCAGCCACCGCTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGcc                                                                                                         <  2:817850/140‑1 (MQ=255)

                            cTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCct                                                                                                        <  1:1859548/140‑1 (MQ=255)

                            cTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCct                                                                                                        >  1:538024/1‑140 (MQ=255)

                            cTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTACATGAACATTCCGGCGCCGCTGCTGCATCGGATGGAAGTAATTCGCct                                                                                                        >  2:1217912/1‑140 (MQ=255)

                             tGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGGCGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCctc                                                                                                       <  2:1923180/140‑1 (MQ=255)

                             tGGATCCAGAGCAGAACGTAGCCTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCctc                                                                                                       <  2:870349/140‑1 (MQ=255)

                               gATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCtctc                                                                                                     <  1:1666211/140‑1 (MQ=255)

                                    agagCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGGATGGAAGTGATTCGCCTCTCCGGtt                                                                                                >  1:686531/1‑140 (MQ=255)

                                    agagCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCACTGCTGGATCGTATCGAAGTGCTTCGCCTCTCCGGtt                                                                                                >  1:1188373/1‑140 (MQ=255)

                                      agCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTtat                                                                                              >  2:2289958/1‑140 (MQ=255)

                                      agCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCCGCTGGATCGTACGGTAGTGATTCGCCTCTCCGGTtat                                                                                              >  1:844625/1‑140 (MQ=255)

                                       gCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTtata                                                                                             <  1:1924817/140‑1 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTGCCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         <  1:1096356/140‑1 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTGCGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         >  1:536507/1‑140 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         <  2:7570/140‑1 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         >  2:1246387/1‑140 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         >  2:2296885/1‑140 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         >  2:508695/1‑140 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         <  1:2410331/140‑1 (MQ=255)

                                           aaCGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         >  2:2064026/1‑140 (MQ=255)

                                           aaCGTAGCGTTCAGCGAACACTTCCTGGAAGGGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGa                                                                                         <  2:800362/140‑1 (MQ=255)

                                                 gCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGa                                                                                   >  1:404892/1‑140 (MQ=255)

                                                  cGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGaa                                                                                  <  2:404892/140‑1 (MQ=255)

                                                     tCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGaaaaa                                                                               >  1:1221540/1‑140 (MQ=255)

                                                         cGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCAGGTTATACCAAAGATGAAAAACTGa                                                                           >  1:855943/1‑140 (MQ=255)

                                                            ccACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACa                                                                        <  1:1751451/140‑1 (MQ=255)

                                                                tACCTGGAGGTGGATTCCGATCTCAGCGACATGATTTTTATCGCGACGACGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGc                                                                    <  2:1188373/140‑1 (MQ=255)

                                                                tACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGc                                                                    <  1:1217912/140‑1 (MQ=255)

                                                                       aaGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCAACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGt                                                             >  1:1749396/1‑140 (MQ=255)

                                                                          tGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATCCGGAAGATGAAAAACTGGGCATCGCCAAACGTCAc                                                          >  2:1172414/1‑140 (MQ=255)

                                                                          tGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCAc                                                          >  1:1988594/1‑140 (MQ=255)

                                                                          tGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCAc                                                          >  1:245902/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGAGGTGATGTTTGTCGCGACCTCGCACTCCATGGACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        <  2:799535/140‑1 (MQ=255)

                                                                            gATTACGATCTCAGCGAGGTGAAGTTTGTCGTGACGTCGGACTCCATGGACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        <  2:891372/140‑1 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATGCCGAAGATGAACAAATGAACACCGCCAAACGTCACct                                                        >  1:851616/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATCCCGAAGACGAAGAAGTGAACAACGCCAAACGTCACct                                                        >  1:956237/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAAc                                                                         <  1:1800785/123‑1 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAAc                                                                         >  2:1800785/1‑123 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:1245280/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:1293165/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:1398975/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:1603616/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:1743989/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  2:433546/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  1:368716/1‑140 (MQ=255)

                                                                            gATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACct                                                        >  2:1322546/1‑140 (MQ=255)

                                                                                aCGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACctgctg                                                    <  1:18092/140‑1 (MQ=255)

                                                                                aCGATCTCAGCGACGCGATGTTTGTCGCGACGTCGAATTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACctgctg                                                    <  1:999656/140‑1 (MQ=255)

                                                                                 cGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCtgctgc                                                   <  2:245902/140‑1 (MQ=255)

                                                                                 cGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCtgctgc                                                   >  1:2356148/1‑140 (MQ=255)

                                                                                     ctcAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGaa                                               <  2:1398975/140‑1 (MQ=255)

                                                                                     ctcAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGaa                                               <  2:560010/140‑1 (MQ=255)

                                                                                     ctcAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGaa                                               <  2:2295041/140‑1 (MQ=255)

                                                                                      tcAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAg                                              >  2:400335/1‑140 (MQ=255)

                                                                                      tcAGCGACGTGATGTTTGTCGCAACCTCGTACTCCATCAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAg                                              <  1:831202/140‑1 (MQ=255)

                                                                                       cAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGc                                             <  2:536507/140‑1 (MQ=255)

                                                                                       cAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGc                                             >  1:1800545/1‑140 (MQ=255)

                                                                                        aGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCa                                            >  2:175434/1‑140 (MQ=255)

                                                                                            aCGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGACGATGAAAAACTGGACATCGCCAAACGTCACGTGCTGCCGAAGCAGAtt                                        >  2:721509/1‑140 (MQ=255)

                                                                                            aCGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGAtt                                        <  2:1221540/140‑1 (MQ=255)

                                                                                             cGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTg                                       >  1:1948/1‑140 (MQ=255)

                                                                                             cGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTg                                       >  1:612544/1‑140 (MQ=255)

                                                                                              gTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGa                                      <  1:175434/140‑1 (MQ=255)

                                                                                                  tGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGt                                  >  2:2208086/1‑140 (MQ=255)

                                                                                                       gTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGc                             >  1:430248/1‑140 (MQ=255)

                                                                                                       gTCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGc                             >  2:1701712/1‑140 (MQ=255)

                                                                                                        tCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCa                            >  2:2098496/1‑140 (MQ=255)

                                                                                                        tCGCGACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCa                            <  1:1844225/140‑1 (MQ=255)

                                                                                                            gACGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGa                        >  2:384449/1‑140 (MQ=255)

                                                                                                             aCGTCGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCAACTGATGCCGAAGCAGATTCAACGTAATGCACTGaa                       >  2:1147635/1‑140 (MQ=255)

                                                                                                                 cGAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGaaaaaa                   <  2:1606938/140‑1 (MQ=255)

                                                                                                                  gAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAg                  <  2:1245280/140‑1 (MQ=255)

                                                                                                                  gAACTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAg                  <  2:368716/140‑1 (MQ=255)

                                                                                                                    aCTCCATGAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGt                <  2:538024/140‑1 (MQ=255)

                                                                                                                          tgtaCATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTg          >  2:2192151/4‑140 (MQ=255)

                                                                                                                           gAACATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGa         <  2:1293165/140‑1 (MQ=255)

                                                                                                                             aCATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGAcc       >  1:536559/1‑140 (MQ=255)

                                                                                                                              cATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGa         >  2:2421687/1‑137 (MQ=255)

                                                                                                                              cATTCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGa         <  1:2421687/137‑1 (MQ=255)

                                                                                                                                ttCCGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGAATGAACGTCATGAACAGAAAAAGGGTGAGCTGACCGTc    >  1:803740/1‑140 (MQ=255)

                                                                                                                                  ccGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTcga  >  1:325359/1‑140 (MQ=255)

                                                                                                                                  ccGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTcga  >  1:1674597/1‑140 (MQ=255)

                                                                                                                                  ccGGCGCCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTcga  <  1:2296885/140‑1 (MQ=255)

CGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTCGA  >  NC_000913/460189‑460458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`