| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,898,816 | A→C | V193G (GTC→GGC) | yieK ← | putative glucosamine‑6‑phosphate deaminase YieK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,898,816 | 0 | A | C | 99.2% | 416.8 / ‑5.0 | 121 | V193G (GTC→GGC) | yieK | putative glucosamine‑6‑phosphate deaminase YieK |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base C (67/52); minor base T (0/1); total (67/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACT > NC_000913/3898680‑3898951 | tGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCaa > 1:344459/1‑140 (MQ=255) aTTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCCGCAACACGGAAGCTGGAACATCTTCGGCAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATc > 2:1663104/1‑140 (MQ=255) tGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA‑TTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCaa > 2:2479570/1‑140 (MQ=255) gCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAGATTTTTCAGTGCGTGCGATTTACCCGCGCCGTTGCCAATGATCAGCaa > 2:1197673/1‑140 (MQ=255) gCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCaa > 2:1465628/1‑140 (MQ=255) cGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAg > 1:1785981/1‑140 (MQ=255) ggCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAATTTTCAGTCCCTACGCGTTACCCGCGCCGCGGCCAATTATCAGCAAGt > 2:795846/1‑140 (MQ=255) cGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTc > 2:29480/1‑140 (MQ=255) cGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGCAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTc > 2:1414144/1‑140 (MQ=255) gCTTTATCAGCGATTACTATCACCGAAGGATGCAGCTGCCACACGGAACCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTcgc < 2:694978/140‑1 (MQ=255) gCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTcgc < 2:409363/140‑1 (MQ=255) tttATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTcgccg < 2:19653/140‑1 (MQ=255) aTCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCa < 2:2434742/140‑1 (MQ=255) aTCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCa > 1:2183901/1‑140 (MQ=255) cGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCatgatg < 1:1465628/140‑1 (MQ=255) gATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGc > 1:1919679/1‑140 (MQ=255) gATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGc > 1:1234550/1‑140 (MQ=255) tACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTAACCGCGCCGCTGCCAATTATCAGCAAGTTTTTGGCCGCCATGATGCttt > 2:1108594/1‑140 (MQ=255) tCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGc < 2:433114/140‑1 (MQ=255) tCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGc > 1:870498/1‑140 (MQ=255) cAGCGAAGGATGCAGCTGCAACTCGGAAGTTGGAACACCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcc < 1:1197673/140‑1 (MQ=255) cAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcc > 1:524637/1‑140 (MQ=255) aGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGccc > 2:1895843/1‑140 (MQ=255) cGAAGGATGCGGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCa > 1:2237732/1‑140 (MQ=255) gAAGGATGCAGCTGCCACACGGTAGTTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt < 1:748421/140‑1 (MQ=255) gAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt < 2:1731568/140‑1 (MQ=255) ggATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGt > 1:196914/1‑140 (MQ=255) gATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTc < 2:2343224/140‑1 (MQ=255) gCAGCTGCAACACGGAAGCTGGTACATCTTCGGTAGCCGTACCTTGCAAAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg < 2:730544/140‑1 (MQ=255) gCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg < 2:1464722/140‑1 (MQ=255) gCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg < 2:1831328/140‑1 (MQ=255) cAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGt < 1:1895843/140‑1 (MQ=255) gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAg < 1:1924475/140‑1 (MQ=255) acGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAgg < 1:521857/140‑1 (MQ=255) aaGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACt < 1:138761/140‑1 (MQ=255) cTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATACTTATCGCCCCCATCGACACGTAGCTGTCAGGCACTAAc > 2:950496/1‑140 (MQ=255) cTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCAGCCATGATCCTTTTCGGCCCCATCGGCACGAAGCTGTCAGGCACTAAc > 2:696263/1‑140 (MQ=255) gAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGaa < 2:1676373/140‑1 (MQ=255) aCATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGaaaa > 1:2017712/1‑140 (MQ=255) cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg > 2:1713164/1‑140 (MQ=255) cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg > 2:1456274/1‑140 (MQ=255) gTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCgccgcc > 2:2377134/1‑140 (MQ=255) aaCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCCTCGTGACGTAGCTGTCAGGTACTAACTAAAAGTCGCCGCCCa > 1:1026761/1‑140 (MQ=255) cGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACt > 1:2280629/1‑140 (MQ=255) gACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTCGCTGTCAGGCACTAGCGAAAAGTCGCCGCCCAACTCg > 1:1130930/1‑140 (MQ=255) gACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGAGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCg < 2:870498/140‑1 (MQ=255) aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGc > 2:2033779/1‑140 (MQ=255) ccTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGcc < 1:2066575/140‑1 (MQ=255) ccTTGCAGAACATTTTTCAGTGCCTACGCCTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGcc < 1:696263/140‑1 (MQ=255) ccTTGCAGAACATTTTTCAGTGCCTACGCCTTACCCGAGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGcc < 1:950496/140‑1 (MQ=255) ttGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGGTGTAAGGCACTAACGAAAAGTGGCCGCCCAACTCGCCAt > 2:931628/1‑140 (MQ=255) ttGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCAt < 1:1456274/140‑1 (MQ=255) ttGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCAt < 1:1713164/140‑1 (MQ=255) tGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATg < 1:1630339/140‑1 (MQ=255) tGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATg < 1:29480/140‑1 (MQ=255) tGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATg < 1:2489448/140‑1 (MQ=255) gCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATgc > 2:2210710/1‑140 (MQ=255) gCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATgc > 2:2083553/1‑140 (MQ=255) gCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATgc > 2:2446085/1‑140 (MQ=255) aGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGTCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATgcgc < 2:1311232/140‑1 (MQ=255) gAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGcc < 1:2062293/140‑1 (MQ=255) aaaCATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGcc < 2:524637/139‑1 (MQ=255) aaCATTTTTCAGTGCCTTCGCTTTACCCGCGCCGCCGCCCATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca < 2:693269/140‑1 (MQ=255) aaCATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca < 2:1592930/140‑1 (MQ=255) aaCATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca < 2:1750994/140‑1 (MQ=255) aaCATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca < 1:581139/140‑1 (MQ=255) cATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCcaca > 2:1717717/1‑140 (MQ=255) ttCAGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATc < 1:430140/140‑1 (MQ=255) aGTGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAAc < 2:1673374/140‑1 (MQ=255) tGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCa > 2:2227135/1‑140 (MQ=255) tGCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCa > 1:60382/1‑140 (MQ=255) gcccgcccTTTTCCCGCGCCGCTGCCAATTATCCGCAAGTTTTTCGCCGCCATGGTGCTTTTCGGCCCCATCGTCACCTAGCTGTCAGGCCCTTACGAAAAGTCGGCGCCCAACTCGCCATGCGCCACAATATCAACCAt < 2:60382/140‑1 (MQ=255) gCCTGTGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGGCCAACTCGACATGGGCCACAATATCAACCAt > 2:635251/1‑140 (MQ=255) gCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAt < 2:2296575/140‑1 (MQ=255) gCCTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAt > 1:1689785/1‑140 (MQ=255) gCCTGCGCTTTACCCGCGCCGCAGCCAATTAACAGTAAGGTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAt < 2:1026761/140‑1 (MQ=255) gCCTGCGCTTTACCCGCCCCGCCGCCAATTACCAGAAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAt < 2:952623/140‑1 (MQ=255) ccTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtc > 2:2082627/1‑140 (MQ=255) ccTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtc < 2:1940479/140‑1 (MQ=255) cTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtct > 2:2437134/1‑140 (MQ=255) cTGCGCTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtct > 2:1923545/1‑140 (MQ=255) cTGCGCTTTACCCGCGCAGCTGACAATTATCCGTAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtct < 2:1130930/140‑1 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca < 1:1447767/123‑1 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCca > 2:1447767/1‑123 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtctct > 2:1616534/1‑140 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtctct > 1:2354118/1‑140 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtctct > 1:1668399/1‑140 (MQ=255) gcgcTTTACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTGTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtctct > 2:1416269/1‑140 (MQ=255) tttACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCt < 1:1717717/140‑1 (MQ=255) ttACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAATGTCCCCGCCCAACCACCCAGGCGCCTCAATATCAACCATCTCTCCCTg > 2:1083540/1‑140 (MQ=255) ttACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTg > 2:134519/1‑140 (MQ=255) ttACCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTg > 2:2168977/1‑140 (MQ=255) aCCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtc > 2:514799/1‑130 (MQ=255) aCCCGCGCCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCAtc < 1:514799/130‑1 (MQ=255) gcgcCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCgg > 2:630661/1‑140 (MQ=255) gcgcCGCTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCgg < 1:2227135/140‑1 (MQ=255) cgccgcTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCggg < 2:502118/140‑1 (MQ=255) cgccgcTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCggg < 1:1678602/140‑1 (MQ=255) ccgcTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGaa > 2:1503302/1‑140 (MQ=255) gcTGCCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACt < 1:1877196/140‑1 (MQ=255) | TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACT > NC_000913/3898680‑3898951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |