| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,953,356 | C→T | G291G (GGC→GGT) | ilvE → | branched‑chain‑amino‑acid aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,953,356 | 0 | C | T | 99.3% | 484.4 / NA | 150 | G291G (GGC→GGT) | ilvE | branched‑chain‑amino‑acid aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (65/84); total (65/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
CCCTGTACCTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGCCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTAC > NC_000913/3953220‑3953489 | gTACCTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCa < 2:2258645/140‑1 (MQ=255) cTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCCAACGCATGCAGTAAACCTTCTACGGTCTCTTCACTgg > 1:1051274/1‑140 (MQ=255) cTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCa < 2:1883757/136‑1 (MQ=255) cTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGGTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTgg > 1:1929895/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCGCGGTTACCAAACCCTTGTAGCCAGCGTTCTTGGGTCTCTTCACTGGCg > 2:1188378/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 1:1228834/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 2:1552111/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 1:1440488/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 1:1503800/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 2:1495456/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 1:1552724/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 1:86933/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACCGGCg > 1:1256749/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACACATTTAGCAAGCGTTCTTCGGTCTCTTCACTgtct > 2:1121439/1‑137 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGGTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 2:429047/1‑140 (MQ=255) ggCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGGTAACAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTgggg > 2:58439/1‑138 (MQ=255) ggCGGATGAAGTGTTCATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCACGGTTACCAAACACATTCAGCAAGCATTCTTCGGTCTCTTCACTGGCg > 2:965538/1‑140 (MQ=255) ggCGGATGAAGTGTTCATGTCCCGTGCGGTGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg < 1:1029454/140‑1 (MQ=255) ggCGGATAAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg < 1:1275166/140‑1 (MQ=255) gccGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGGTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCg > 2:81312/3‑140 (MQ=255) gCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCGGGTTACCAAACGCCATACGCAAGCCGTTTTCCGTCTCTTCACTGGCGa > 2:1171560/1‑140 (MQ=255) gCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCATCAAGCCCTCTTCGTTCTCTTCACTGGCGa > 1:943331/1‑140 (MQ=255) gCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGa > 2:1916190/1‑140 (MQ=255) gCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGGTGTGGCCCGGTTACCAAACGCATTCAGCAATCCGTCTTCGATCTCTTCACTGGCGa > 1:1163092/1‑140 (MQ=255) ggATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGaaa < 1:2315401/140‑1 (MQ=255) aTGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAAcc > 1:473495/1‑140 (MQ=255) aTGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAAcc > 2:355995/1‑140 (MQ=255) aTGAAGTGTTTATGTCCGGTACCGCTGCAGAAATCACACCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAAcc < 1:830802/140‑1 (MQ=255) tGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCg < 2:86933/140‑1 (MQ=255) aGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAg < 1:1399131/140‑1 (MQ=255) ttATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATaaa < 2:1523208/140‑1 (MQ=255) ttATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATaaa < 2:1228834/140‑1 (MQ=255) tATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATaaaa > 2:1982030/1‑139 (MQ=255) gTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATggg > 1:1886430/1‑140 (MQ=255) tCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATgggg < 1:406710/140‑1 (MQ=255) tCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATgggg < 2:215490/140‑1 (MQ=255) tCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATgggg < 1:2036001/140‑1 (MQ=255) tCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATgggg < 1:178525/140‑1 (MQ=255) tCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATgggg < 1:77492/140‑1 (MQ=255) tACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGt < 1:58439/140‑1 (MQ=255) tACGGCGGCAGAAATCACGCCACTGTGCAGCGTAGACTGTATTCAGGGTGGCGAAGGGCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGt < 1:1171560/140‑1 (MQ=255) cggcAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGAt > 1:65251/1‑140 (MQ=255) aTCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTaa < 1:1916190/140‑1 (MQ=255) gCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCaat < 1:2212496/140‑1 (MQ=255) ccAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCaata < 1:2082887/140‑1 (MQ=255) ccAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCaata < 2:1329765/140‑1 (MQ=255) tGCGCAGCGTAGACGCTATTCATGTAGGCCAAGGCCGCTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCaataaata < 1:677800/140‑1 (MQ=255) cGTAGACGGTATTCAGGTTGGCCAAGGCCGTGGGGTCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACaaaaaa < 2:1096244/140‑1 (MQ=255) tAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATg > 1:577572/1‑140 (MQ=255) tAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATg > 2:90319/1‑140 (MQ=255) gACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATggg < 1:350182/140‑1 (MQ=255) aCGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGa > 1:2438358/1‑140 (MQ=255) tATTCAGGGTGGCGAAGGTCGTTGTGGCCCGGTTACCAAACGCATTCCGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgc < 1:1691556/140‑1 (MQ=255) aTTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgca > 2:2127223/1‑140 (MQ=255) aTTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgca > 1:1403428/1‑140 (MQ=255) aTTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTAAGAGCAAGTTAATCAAAAAATGCAAAAAATGGGACGgca > 2:715693/1‑140 (MQ=255) aTTCAGGTTGGCGAAGGCCGTTGTGGCCCGGCTAGCAAACGCGTTGAACATTCCTTATTCGGTCTCTTCACCGGCGAAACCGAAGAGAAATGGGGCTGGGTAGATCCAGTTAATCAATAAATACAAAAGATTGGTAGgca > 2:1833593/1‑140 (MQ=255) aGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgcacgca < 1:2114403/140‑1 (MQ=255) gTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCAcc > 1:504310/1‑140 (MQ=255) ttGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGGTAATCAAGAAAAACTAAAAATAGGACGGCACGCACCg > 1:632625/1‑140 (MQ=255) ggCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTGATCAATAAATACAACAAATGGAACGGCACGCACCGTc > 1:972185/1‑140 (MQ=255) ggCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTc > 1:2020171/1‑140 (MQ=255) ggCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTc > 2:1514245/1‑140 (MQ=255) cGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgc < 2:504684/128‑1 (MQ=255) cGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGgc > 1:504684/1‑128 (MQ=255) cGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTccc > 1:338267/1‑140 (MQ=255) ggCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCAttt > 2:91806/1‑140 (MQ=255) ccGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTAc < 2:2438358/140‑1 (MQ=255) ccGTTGTGGCCCGGTTACCAAACGCATTCAGAAAGCCTTTTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTAc < 2:637950/140‑1 (MQ=255) ttGTGGCCCGGTTACGAAACGCATTGAGC‑GGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAACACAAAAAATGGGACGGCACGCACCGTCCCATTTACgaga < 1:881303/140‑1 (MQ=255) ttGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACgag > 1:2276875/1‑140 (MQ=255) tgtgGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACgaga < 2:2387775/140‑1 (MQ=255) tgGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGACGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGagaca < 2:1440488/140‑1 (MQ=255) cccGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGagacagac < 2:1403428/140‑1 (MQ=255) cccGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGagacagac < 2:1989668/140‑1 (MQ=255) cGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGacac < 1:2005143/140‑1 (MQ=255) aggTTACCAAACGCATTTAGCATGCCTTCTTCGGTCTCTCCACTGGCGCAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGacac < 2:720459/139‑1 (MQ=255) ggTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACt < 2:327146/140‑1 (MQ=255) gTTACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTg > 2:542908/1‑140 (MQ=255) tACCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTggg < 2:65251/140‑1 (MQ=255) tACCAAACACATTCAGTAAGCCCTCTTCGGTATCTTCACTGGCGAAACTGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTggg < 2:1204665/140‑1 (MQ=255) cagcAAACGCATTCATCAAGCCCTCCTCGCTCTCTTCTCTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTggg < 1:687361/137‑1 (MQ=255) aCCAAACGCATTCAGCATGCCTTCTTCGGTCTCTTGACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGa < 2:822698/140‑1 (MQ=255) aCCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGagacaga > 1:1547811/1‑132 (MQ=255) aCCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGa < 1:1833593/140‑1 (MQ=255) aCCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGa < 2:2069352/140‑1 (MQ=255) aCCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGa < 2:1246913/140‑1 (MQ=255) aCCAAACGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGa < 1:90319/140‑1 (MQ=255) aaaCGCATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGta < 1:2431828/140‑1 (MQ=255) aCGCATTCAGCAAGCCTTCTTCAGTCTCTTCTCTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGtaaa < 2:1018464/140‑1 (MQ=255) cATTCAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGtaaataa > 1:459115/1‑140 (MQ=255) cAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTa < 2:459115/140‑1 (MQ=255) cAGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTa < 2:1397454/140‑1 (MQ=255) aGCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCATCCGATTGACGAGACACACACGGGGAGTAAATAAAgctg > 2:687361/1‑137 (MQ=255) gCAAGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATg < 2:1938569/140‑1 (MQ=255) aGCCTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCt < 2:1819431/140‑1 (MQ=255) ccTTCTTCGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTaa < 2:1275042/140‑1 (MQ=255) cttcGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTa > 2:317658/1‑129 (MQ=255) cttcGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTAc > 1:253488/1‑140 (MQ=255) cttcGGTCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTAc > 1:1509134/1‑140 (MQ=255) | CCCTGTACCTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGCCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTAC > NC_000913/3953220‑3953489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |