BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,126,222	A→G	L197L (TTG→CTG)	priA ←	primosome factor N'

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,126,222	0	A	G	97.7%	287.7 / NA	85	L197L (TTG→CTG)	priA	primosome factor N'
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (17/66); minor base C (0/2); total (17/68)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

AGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGC  >  NC_000913/4126086‑4126358

agcACGTTTTCCAGTTCGCTGACATTACCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCg                                                                                                                                        <  1:672781/140‑1 (MQ=255)

agcACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCg                                                                                                                                        <  1:1225926/140‑1 (MQ=255)

 gcACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGACTGTTCGGTATTCAATCGCAGCCGc                                                                                                                                       >  1:1486152/1‑140 (MQ=255)

      ttttCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCAcc                                                                                                                                  >  1:1476727/1‑140 (MQ=255)

      acagccAGTACGCTGAGATAACCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCAcc                                                                                                                                  <  1:2200562/136‑1 (MQ=255)

          ccAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGaa                                                                                                                              <  1:1092578/140‑1 (MQ=255)

          ccAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGaa                                                                                                                              <  2:1856396/140‑1 (MQ=255)

          ccAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGaa                                                                                                                              <  2:1673181/140‑1 (MQ=255)

          ccAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGaa                                                                                                                              <  1:1455031/140‑1 (MQ=255)

           cAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGaaa                                                                                                                             <  2:129249/140‑1 (MQ=255)

            aGTACGCTGAGATAACCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAAc                                                                                                                            <  2:2388641/140‑1 (MQ=255)

               aCGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTTCCGCGCTATGAATTGCGCCAACGGCGGTTGCCTGGGCGGGATTCAATCGCTGCCGCGCCCCCGAAACGGc                                                                                                                         >  1:1661493/1‑140 (MQ=255)

                 gCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCCGTTTGGGTTTCAATCGACGCCGCCCACCAGAAACGGCaa                                                                                                                       >  2:963258/1‑139 (MQ=255)

                   tGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAg                                                                                                                     >  1:1958007/1‑140 (MQ=255)

                    gagaTAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgt                                                                                                                    <  1:320105/140‑1 (MQ=255)

                     agaTAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgtt                                                                                                                   >  1:475094/1‑140 (MQ=255)

                     agaTAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGACCCCCCCCCGAAACGGCCTAgtt                                                                                                                   >  2:1988500/1‑140 (MQ=255)

                     agaTAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGACTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgtt                                                                                                                   <  2:1486152/140‑1 (MQ=255)

                        tAAGCCTCAGTTTTCCCGGAGCCGGTAAGCCCCGCCAGCAGACAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgttcgt                                                                                                                <  1:1300037/140‑1 (MQ=255)

                        tAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGGAGCCGCCCACCAGCAACGGCATAggtcgt                                                                                                                >  1:1061788/1‑140 (MQ=255)

                        tAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgttcgt                                                                                                                >  1:2187500/1‑140 (MQ=255)

                         aacccTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAgttcgtt                                                                                                               <  2:1965818/137‑1 (MQ=255)

                           aCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCCGTTCGGTATTTAAACGCAGCCGCCCACCCGAAACGGCATAgttcgttcc                                                                                                             >  2:1827811/1‑139 (MQ=255)

                             cTCCGTTTTACCGGATCCGGTACCGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGcc                                                                                                           <  1:734731/140‑1 (MQ=255)

                             cTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGcc                                                                                                           <  1:1815836/140‑1 (MQ=255)

                             cTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGcc                                                                                                           <  2:1958007/140‑1 (MQ=255)

                             cTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGcc                                                                                                           <  1:1476860/140‑1 (MQ=255)

                               ccGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGGCTGTTCGGGATTTAATCGCAGCCGCCCACCCGAAACGGCATAGTTCGTTCGcccc                                                                                                         >  2:1815836/1‑138 (MQ=255)

                               ccGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGGCTGTTCAGGATTCAAGCGCACACCCTCCCCCGAAAAGCCATAGGTCGTTcccccg                                                                                                         >  2:1132108/1‑138 (MQ=255)

                               ccGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAg                                                                                                         <  1:1248581/140‑1 (MQ=255)

                               ccGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAg                                                                                                         <  2:241560/140‑1 (MQ=255)

                               ccGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAg                                                                                                         <  2:2425196/140‑1 (MQ=255)

                                cGTTTTACCGGACCCGGTAACGACCGCCAGCTGCCAGGCCGAAAAAGTTTCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGt                                                                                                        <  2:650790/140‑1 (MQ=255)

                                cGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGt                                                                                                        <  2:1476727/140‑1 (MQ=255)

                                 gTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTc                                                                                                       >  1:119520/1‑140 (MQ=255)

                                 gTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTc                                                                                                       >  1:316130/1‑140 (MQ=255)

                                  ttttACGGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  1:1619949/140‑1 (MQ=255)

                                  ttttACCGGAACCGGTACCGCCTGCCAGCAGCCAGACAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  2:1061788/140‑1 (MQ=255)

                                  ttttACCGGAACCGGTAACGCCCGCCAGCGGCCAGGCCGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  1:1085079/140‑1 (MQ=255)

                                  ttttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  1:1406646/140‑1 (MQ=255)

                                  ttttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  2:2139444/140‑1 (MQ=255)

                                  ttttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTACTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑g                                                                                                     <  2:1593199/140‑1 (MQ=255)

                                    ttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCt                                                                                                   <  1:1826514/140‑1 (MQ=255)

                                    ttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCt                                                                                                   <  2:316130/140‑1 (MQ=255)

                                    ttACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCt                                                                                                   <  2:1737869/140‑1 (MQ=255)

                                     tACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTa                                                                                                  <  2:475094/140‑1 (MQ=255)

                                     tACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTa                                                                                                  <  1:1558836/140‑1 (MQ=255)

                                       ccGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGGCTGTTTGGGATTTAATCGCAACCCCCCCCCAAAAACGGCATAGTTTGTTTGCCCGTC‑GCTtaa                                                                                                >  2:614629/1‑140 (MQ=255)

                                        cGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAAc                                                                                               <  1:1901667/140‑1 (MQ=255)

                                          gAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGGCTGTTCGGGATTCCATCCCCGCCGCTACCCGAAAAAGGCATAGTTCGTTCGCCCGTC‑GCTAAAccc                                                                                             >  2:843539/1‑138 (MQ=255)

                                          gAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAActc                                                                                             <  1:314194/140‑1 (MQ=255)

                                          gAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAActc                                                                                             <  2:82002/140‑1 (MQ=255)

                                            aCCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTTGGGATTCAATCGCCGCCGCTCCACAGGAACGGCATAGTTCGTTCACCAGTC‑GCTAAACTCTg                                                                                           >  2:722968/1‑140 (MQ=255)

                                              cGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGgt                                                                                         <  1:1988500/140‑1 (MQ=255)

                                               ggTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGGGGCCTGTTCGGGATTTAATCGCAGCGCCTCACCCAAAACGGCATAGTTCGTACGCCCGTC‑GCTAAACTCTGgtg                                                                                        >  2:1042020/1‑140 (MQ=255)

                                                gTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGGATTCAATCGCAGCCGCCCACCCGGAACGGCAAAGTTCGTTTCCCAATC‑GCTAAACTCTGgggt                                                                                       >  2:662917/1‑140 (MQ=255)

                                                    cgcccgccAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCa                                                                                   <  1:614629/140‑1 (MQ=255)

                                                    cgcccgccAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCa                                                                                   <  2:119520/140‑1 (MQ=255)

                                                    cgcccgccAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCa                                                                                   <  1:2078868/140‑1 (MQ=255)

                                                        cgccAGCAGCCAGGCCGAAAAAATATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTg                                                                               <  1:963258/140‑1 (MQ=255)

                                                        cgccAGCAGCCAGGCAGTAAAAATATCTGCCGCGCAATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTg                                                                               <  2:1026915/140‑1 (MQ=255)

                                                         gccAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGc                                                                              >  1:14839/1‑140 (MQ=255)

                                                             gcagcCAGGCAGAAAAAGTATCGGCCGCGTTATGAATCGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTaaa                                                                          <  1:907620/140‑1 (MQ=255)

                                                                  cAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCAACCGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATcaca                                                                     <  2:363404/140‑1 (MQ=255)

                                                                  cAGGCAGAAAAAGTATCTGCCGAGCCATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATcaca                                                                     <  1:717831/140‑1 (MQ=255)

                                                                       aGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTTACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGAc                                                                <  1:1954593/140‑1 (MQ=255)

                                                                       aGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGAc                                                                <  2:14839/140‑1 (MQ=255)

                                                                       aGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGAc                                                                <  2:2187500/140‑1 (MQ=255)

                                                                       aGAAAAAGTATCTGCCGAGCTAGGAATTGCGACAACGGCTGTGGCCTGATCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGAc                                                                <  2:1026818/140‑1 (MQ=255)

                                                                                  cTGCCGCGCTATGAATTGCGCCGACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGt                                                     <  1:1132108/140‑1 (MQ=255)

                                                                                    gCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCCTAGTTCGTTCGCCAGTC‑GCTAAAATCTGGTGGTTCACTTGCTAAATCACACAGACCTTTTTTTCGTAg                                                   >  2:546176/1‑140 (MQ=255)

                                                                                     ccGCGCTATGAATTGTGCCAACGGCAGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAgc                                                  <  1:1033511/140‑1 (MQ=255)

                                                                                     ccGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAgc                                                  <  2:2022131/140‑1 (MQ=255)

                                                                                       gcgcTATGAATTGCGCCAACGGCGGGGGCCTGCTCGGGTTTCAATCCCAGGCGCTCACCAAAAAAGGCCTAGTTTGTTCCCCAGACGGCTAAAC‑CTGGTGGTTCCCTTGGTAAATCACACAACCCTTTTTTGCGAAgcgc                                                >  2:914199/1‑140 (MQ=255)

                                                                                               aaTTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAAcg                                        <  1:1868421/140‑1 (MQ=255)

                                                                                               aaTTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAAcg                                        <  2:2076998/140‑1 (MQ=255)

                                                                                                 ttGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAAcgcg                                      <  1:546176/140‑1 (MQ=255)

                                                                                                   gcgcCAACGGCGGTTGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGc                                    <  2:1347735/140‑1 (MQ=255)

                                                                                                   gcgcCAACGGCGGTGTCCTGTTAGGTATTCAATCGCACCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGc                                    <  1:722968/140‑1 (MQ=255)

                                                                                                   gcgcCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGc                                    <  1:2421437/140‑1 (MQ=255)

                                                                                                   gcgcCAACGGCGGTGCCCTGTTCGGTATTGAATCGCACCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGc                                    <  1:877308/140‑1 (MQ=255)

                                                                                                   gcgaCAATGGCGGTGGCCTGTTCGATATTCAAAAGAGACCGCTCACTAGAAACGGCATAATACGTACGCCCGTC‑GCTAATCTCTGGTGTAACACTTGCTAAATCACCCAGACCTTTTTTGCGTAGCGCCTGCAACGAGGc                                    <  2:1661493/140‑1 (MQ=255)

                                                                                                    cgcCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCgg                                     <  1:223604/138‑1 (MQ=255)

                                                                                                    cgcCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCgg                                     >  2:223604/1‑138 (MQ=255)

                                                                                                    cgcCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGca                                   >  1:2292545/1‑140 (MQ=255)

                                                                                                     gcCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAATTCGTTCCCCAGTC‑GCTAAACTCTGGGGTTTCACTTGCTAAAACACACAAACCTTTTTTGCGTAGCGCCTGCCACGCGGcat                                  >  2:2238791/1‑140 (MQ=255)

                                                                                                       cAACGGCGGTGGCCTGTTCGGGATTCAATCGCAGCCGCTCCCCACAAAAGGGATAATTCGTTCGGCAGCC‑GCTAAACTCTGGGGTTTCACTTGCTAAATCACACAGACCCTTTTTGCTTAACGCCTGCAACGCGGcatca                                >  2:2421437/1‑140 (MQ=255)

                                                                                                         aCGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCaa                                          >  2:2406255/1‑128 (MQ=255)

                                                                                                         aCGGCGGTGGCCTGTTCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCaa                                          <  1:2406255/128‑1 (MQ=255)

                                                                                                                       ttCGGTATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTCCAAAGCGGCATCAGTAAATTCGAGCGTgg                >  1:780014/1‑140 (MQ=255)

                                                                                                                            tATTCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGAGCCAGCAGCGCGGCATAATTAAATTCGAGCGTGGCGAcc           >  2:875053/1‑140 (MQ=255)

                                                                                                                               tCAATCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTgg        <  1:2247204/140‑1 (MQ=255)

                                                                                                                                 aaTCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCTTAGCGCCTCCAATGCGACATCATTAAATTCGAGCGTGGCGACCTGGTc      >  2:898258/1‑140 (MQ=255)

                                                                                                                                 aaTCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCGACGCGGCATCATTAGATTCGACCGTGGCGACCTGGTc      >  1:865426/1‑140 (MQ=255)

                                                                                                                                 aaTCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTc      >  1:1622704/1‑140 (MQ=255)

                                                                                                                                 aaTCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTc      >  1:2103383/1‑140 (MQ=255)

                                                                                                                                 aaTCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTc      >  1:1737371/1‑140 (MQ=255)

                                                                                                                                   tCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTcgc    >  1:466303/1‑140 (MQ=255)

                                                                                                                                   tCGCAGCCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTcgc    >  2:1487794/1‑140 (MQ=255)

                                                                                                                                   tCGCAGCCGCTCACCAGAAACGACACAGTCCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTcgc    <  1:914199/140‑1 (MQ=255)

AGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTC‑GCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGC  >  NC_000913/4126086‑4126358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`