BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,181,903	T→C	I220T (ATC→ACC)	rpoB →	RNA polymerase subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,181,903	0	T	C	100.0%	505.5 / NA	141	I220T (ATC→ACC)	rpoB	RNA polymerase subunit beta
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/55); total (86/55)

Only 100 of 144 total aligned reads displayed.

GCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAA  >  NC_000913/4181766‑4182038

gcgTATCATCCCTTACCTTGGTCCCTGGCTGTACTCCGACTTCGATCCAAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGAccc                                                                                                                                       <  2:687553/140‑1 (MQ=255)

 cgTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCt                                                                                                                                      <  2:2088992/140‑1 (MQ=255)

  gTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTc                                                                                                                                     >  2:567849/1‑140 (MQ=255)

        tcCCTTACCGTGGTTGCTGGCTCGAATTCAAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTg                                                                                                                               <  1:660047/140‑1 (MQ=255)

        tcCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCCAAACTACACCACAAAGCAGACCCTCGAccct                                                                                                                               >  2:1175845/1‑138 (MQ=255)

         cccTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGTGCCCTGAACTAAACCACAGAGGAGACCCTCGACCTGt                                                                                                                              >  1:1024512/1‑140 (MQ=255)

            ttACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCt                                                                                                                           >  2:85892/1‑140 (MQ=255)

            ttACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCt                                                                                                                           >  1:286287/1‑140 (MQ=255)

              aCCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCAGAACTACACCACAGGGCAGACCCTCGACCTGTTcctg                                                                                                                         >  1:1113195/1‑137 (MQ=255)

               ccGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATTGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTg                                                                                                                        <  2:1369568/140‑1 (MQ=255)

               ccGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTg                                                                                                                        <  2:1336167/140‑1 (MQ=255)

                cGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGa                                                                                                                       <  2:2312395/140‑1 (MQ=255)

                 gTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaa                                                                                                                      <  2:286287/140‑1 (MQ=255)

                  tGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaa                                                                                                                     >  2:1268619/1‑140 (MQ=255)

                       ccTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGtt                                                                                                                <  1:214921/140‑1 (MQ=255)

                          ggctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTAt                                                                                                              <  2:1667955/139‑1 (MQ=255)

                          ggctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTAt                                                                                                              >  1:1667955/1‑139 (MQ=255)

                               gACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGTAGACCCTAGACCTGATCTTTGCAAAAGTTATCTTTGa                                                                                                        >  1:1000642/1‑140 (MQ=255)

                               gACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGa                                                                                                        >  2:110671/1‑140 (MQ=255)

                                aCTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGaa                                                                                                       <  2:44968/140‑1 (MQ=255)

                                 cTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGaaa                                                                                                      <  1:110671/140‑1 (MQ=255)

                                  ttCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAAt                                                                                                     <  1:2186202/140‑1 (MQ=255)

                                    cGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCCCAGAGCAGACCCCCGACCTGTTCTTGGAAAAAGTTATCTTTGAAATcc                                                                                                   >  2:1078661/1‑140 (MQ=255)

                                     gAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCg                                                                                                  <  1:45888/140‑1 (MQ=255)

                                     gAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCg                                                                                                  <  1:2181610/140‑1 (MQ=255)

                                       aTTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTg                                                                                                <  2:506579/140‑1 (MQ=255)

                                          cGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATa                                                                                             <  1:2192573/140‑1 (MQ=255)

                                            aTCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAAc                                                                                           >  2:1821548/1‑140 (MQ=255)

                                               cGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAg                                                                                        <  1:567849/140‑1 (MQ=255)

                                                 aaGGACAACCTGTTCGTGCGTATCGACCGTCTCCGCAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCt                                                                                      <  2:1000642/140‑1 (MQ=255)

                                                  aGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTg                                                                                     <  1:85892/140‑1 (MQ=255)

                                                            gTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                                           >  1:1651039/1‑140 (MQ=255)

                                                            gTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                                           >  1:346681/1‑140 (MQ=255)

                                                            gTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                                           >  2:65158/1‑140 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                                         >  2:1931907/1‑140 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                                         >  2:1276944/1‑140 (MQ=255)

                                                                       tCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGaa                                                                <  2:1618335/140‑1 (MQ=255)

                                                                       tCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGaa                                                                >  1:335399/1‑140 (MQ=255)

                                                                       tCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTAATCTTTGAGATCTGTGATAACAAGCTGCAGATGGAACTGGTGCCGGaa                                                                >  2:823519/1‑140 (MQ=255)

                                                                          aCCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTACAGATGGAACTGGTGCCGGAACGc                                                             <  2:590647/140‑1 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         >  2:1466421/1‑140 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         >  1:287822/1‑140 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         >  2:1768212/1‑140 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         >  2:2081030/1‑140 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         <  1:2081030/140‑1 (MQ=255)

                                                                              tCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGAGAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGc                                                         >  1:897035/1‑140 (MQ=255)

                                                                               cGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCg                                                        <  1:1821548/140‑1 (MQ=255)

                                                                                 ccGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgtg                                                      >  1:1310104/1‑140 (MQ=255)

                                                                                  cGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGAAATTGGTGCCGGAACGCCTGCgtgg                                                     >  1:1085177/1‑140 (MQ=255)

                                                                                     aaaCTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGa                                                  >  1:2340857/1‑140 (MQ=255)

                                                                                     aaaCTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGa                                                  <  2:620092/140‑1 (MQ=255)

                                                                                                  ccATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCtttt                                     <  1:65158/140‑1 (MQ=255)

                                                                                                   catcatTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTg                                    <  1:19499/140‑1 (MQ=255)

                                                                                                     tcatTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGAc                                  >  1:2348189/1‑140 (MQ=255)

                                                                                                     tcatTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGAGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGAc                                  >  1:1135556/1‑140 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACGACAGTGCAGACCCGCGATCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                          <  2:1024512/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                          <  1:2228262/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACAGGTGCCGGAACGCCTGTGTGGTGAATCCGCTTCTTTTGACATCGAAGc                          >  2:966035/1‑140 (MQ=255)

                                                                                                              gcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCt                         <  1:2135799/140‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGGCCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                        <  1:979734/140‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                          <  2:1530826/138‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                        <  2:82526/140‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTAGTGAAACCGCATCTTTTGACATCGAAGc                          >  1:1530826/1‑138 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGGGGTGAAACAGCATCTTTTGACATCGAAGCTa                        >  2:923931/1‑140 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGAAGACCCTCGACCGGTTATTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                        <  2:889251/140‑1 (MQ=255)

                                                                                                                gcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTaa                       >  1:2082228/1‑140 (MQ=255)

                                                                                                                gcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTaa                       <  1:2422682/140‑1 (MQ=255)

                                                                                                                gcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCATGCGTGGCGAACCCCCATCTTCTGACATCGAAGCTaa                       >  1:780548/1‑140 (MQ=255)

                                                                                                                gcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGGGCCGGAACGCCTTCGTTGTGAAACCACATCCTTTGACATCGAAGCTaa                       >  2:777275/1‑140 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTTGACATGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                   <  1:1081250/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                   <  1:1276944/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                   <  2:2264009/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                   <  2:2280933/140‑1 (MQ=255)

                                                                                                                      aaCTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTCCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTaa                 <  2:2208790/140‑1 (MQ=255)

                                                                                                                       aCTACACCTCAGAGCAGCCCCTTGACCTGTTATGTAAAATAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTaaa                <  2:1134494/140‑1 (MQ=255)

                                                                                                                          acacCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAgtg             <  2:317349/140‑1 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                        >  1:1701026/1‑127 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                        <  2:1701026/127‑1 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTa           >  1:2420849/1‑140 (MQ=255)

                                                                                                                              cacaGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACg         <  1:624826/140‑1 (MQ=255)

                                                                                                                              cacaGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACg         >  2:37569/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGTATCTTTTGACATCGGAGCTAACGGTAAAGTGTACGTa       >  1:959605/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:1707550/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:1570802/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:1367125/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  2:305914/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:2265836/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:2277953/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  2:1913554/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  2:1544878/1‑140 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCAGTGATAACAAGCTGCAGATGGAACTGGAGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa       >  1:481331/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa    >  1:1011712/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa    >  1:1981596/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa    >  1:226085/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATACGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa    >  2:105088/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACATGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa  >  2:1470766/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa  >  2:2089420/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa  >  1:2347108/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa  >  1:626941/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTCTTGACATGGAATCTCACGGTAAAGTGTACGTAGaaaa  >  1:1181092/1‑140 (MQ=255)

GCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAA  >  NC_000913/4181766‑4182038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`