BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,302,825	A→G	V85A (GTG→GCG)	mdtO ←	putative multidrug efflux pump subunit MdtO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,302,825	0	A	G	100.0%	406.7 / NA	115	V85A (GTG→GCG)	mdtO	putative multidrug efflux pump subunit MdtO
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (58/57); total (58/57)

Only 100 of 115 total aligned reads displayed.

AAAAGACCAGCCCCAAGCGATGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCACCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCACCAGCAG  >  NC_000913/4302691‑4302958

aaaaGACCAGCCCCAAGCGATGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTg                                                                                                                                  >  2:1546522/1‑140 (MQ=255)

    gACCAGCCCCAAGCGATTGGTGCGCATCAAACACACGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCaa                                                                                                                              <  2:863068/140‑1 (MQ=255)

     aCCAGCCCCAAGCGATGGGTGCCCACCAAAAACATGCCGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAGCAGGCTGCCGATCTCCAGCGCCGTGGCAAc                                                                                                                             <  1:984627/140‑1 (MQ=255)

       cAGCCCCAAGCGATGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGCTCACAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACca                                                                                                                           >  2:822021/1‑140 (MQ=255)

          ccccAAGCGATGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCacaa                                                                                                                        >  2:599603/1‑140 (MQ=255)

                    tGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATcgc                                                                                                              >  1:2369552/1‑140 (MQ=255)

                    tGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATcgc                                                                                                              <  2:2097699/140‑1 (MQ=255)

                    tGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGACGATCTCTAGCGCCATGGCAATCACAAACAAGATcgc                                                                                                              >  1:666473/1‑140 (MQ=255)

                        tGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACa                                                                                                          >  2:16944/1‑140 (MQ=255)

                          cgcATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACaaa                                                                                                        >  1:1516977/1‑140 (MQ=255)

                                     cATGCAGCCCATCAGGTTCGGTTCGGCGATGATGATTCGTATCAACGGGTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTaaa                                                                                             <  2:1079342/140‑1 (MQ=255)

                                       tGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAc                                                                                           >  2:1265209/1‑140 (MQ=255)

                                          aGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  2:1987817/140‑1 (MQ=255)

                                          aGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  1:382029/140‑1 (MQ=255)

                                          aGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  2:160274/140‑1 (MQ=255)

                                          aGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  2:2369552/140‑1 (MQ=255)

                                          aGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  1:1546522/140‑1 (MQ=255)

                                            cccATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGtt                                                                                      <  1:1371912/140‑1 (MQ=255)

                                            cccATCAGGATCGGTACGGCGACGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGtt                                                                                      <  1:958903/140‑1 (MQ=255)

                                               aTCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGa                                                                                   <  1:1954353/140‑1 (MQ=255)

                                                tCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGAc                                                                                  >  1:1758578/1‑140 (MQ=255)

                                                    gATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        >  1:1604320/1‑130 (MQ=255)

                                                    gATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAcgcg                                                                                        <  2:1604320/130‑1 (MQ=255)

                                                    gATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGaa                                                                              <  1:1265209/140‑1 (MQ=255)

                                                      tCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATa                                                                            >  1:1595672/1‑140 (MQ=255)

                                                      tCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATa                                                                            >  2:2025734/1‑140 (MQ=255)

                                                      tCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATa                                                                            >  1:291409/1‑140 (MQ=255)

                                                       cGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATAc                                                                           <  2:1758578/140‑1 (MQ=255)

                                                        ggTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATAcc                                                                          >  1:377110/1‑140 (MQ=255)

                                                            cGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTaa                                                                      <  2:1874627/140‑1 (MQ=255)

                                                              gCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTaaaa                                                                    >  2:1656312/1‑140 (MQ=255)

                                                                   gatCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCa                                                               <  1:1629455/140‑1 (MQ=255)

                                                                   gatCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCa                                                               <  1:544947/140‑1 (MQ=255)

                                                                    atCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCAc                                                              >  2:2100885/1‑140 (MQ=255)

                                                                        aTCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGcc                                                          <  2:2435481/140‑1 (MQ=255)

                                                                             aTCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACTCGTTCGAATGAATAGCGTAAACCAGCACTGCCAGCGa                                                     >  1:1196773/1‑140 (MQ=255)

                                                                             aTCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTGGGTGTAAATCGCATTCGACTGAATAGCGTAGAACAGCACTGCCAGCGa                                                     >  2:726828/1‑140 (MQ=255)

                                                                             aTCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTAGGTGTAAAACGCTTTCCACTGAATAACGTACAACAGCACTGCCAGCGa                                                     >  2:685608/1‑140 (MQ=255)

                                                                              tCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGAt                                                    <  1:599603/140‑1 (MQ=255)

                                                                              tCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGAt                                                    >  1:1597808/1‑140 (MQ=255)

                                                                                aaCGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATaa                                                  <  1:185106/140‑1 (MQ=255)

                                                                                aaCGGTTCGCCGTATGACCATTCGTAGATCACAAATAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATaa                                                  <  2:666473/140‑1 (MQ=255)

                                                                                 aCGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAAc                                                 <  1:1556082/140‑1 (MQ=255)

                                                                                 aCGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTGCGACTGAATACGGTTAAACAGGACTGCCAGCGATAAc                                                 >  1:652930/1‑140 (MQ=255)

                                                                                  cGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACg                                                <  1:2237814/140‑1 (MQ=255)

                                                                                   ggTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGc                                               <  2:1595672/140‑1 (MQ=255)

                                                                                     ttCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCca                                             <  2:1516977/140‑1 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAGGCGTTCGAATGAGTACCGTAAAACAGCACTGTCAGCGATAACGCcaca                                           >  2:1070972/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAATCATCACTGCAAGCGATAACGCcaca                                           >  1:1010739/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATaa                                                  >  2:1593101/1‑133 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           >  1:1840399/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           >  1:2439898/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           >  2:615361/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           <  1:1714098/140‑1 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           <  1:1534700/140‑1 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCcaca                                           >  2:2150490/1‑140 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCca                                             >  2:546961/1‑138 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCca                                             <  1:546961/138‑1 (MQ=255)

                                                                                       cGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAAAGCGTTCGACTGACTACAGTAAAACAACACTACCAGCGATAACGCcaca                                           >  2:936767/1‑140 (MQ=255)

                                                                                         ccGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACaaa                                         <  1:1496855/140‑1 (MQ=255)

                                                                                         ccGTATGACCATTTGCAGATCAAAAACAGTCTGCCGAACTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACaaa                                         <  1:822021/140‑1 (MQ=255)

                                                                                          cGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACaaaa                                        <  1:1470230/140‑1 (MQ=255)

                                                                                            tATGACCATTTGTAGATGAAAACCAGGCTGCAGATGTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:1011966/140‑1 (MQ=255)

                                                                                            tATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCCCTGCCAGCGATAACGCCACAAAAgg                                      >  1:1009412/1‑140 (MQ=255)

                                                                                            tATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  1:94090/140‑1 (MQ=255)

                                                                                            tATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  1:1877478/140‑1 (MQ=255)

                                                                                            tATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:1840399/140‑1 (MQ=255)

                                                                                            tATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGAAACCCCCACAAAAgg                                      >  2:1409578/1‑140 (MQ=255)

                                                                                                  cATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGAtctc                                <  1:358471/140‑1 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAATAGCACTGCCAGCGAAAACGCCACAAAAGGGATCTCaa                              >  1:1011966/1‑140 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      >  1:220314/1‑132 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:58899/132‑1 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      >  1:58899/1‑132 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:220314/132‑1 (MQ=255)

                                                                                                    tttGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCaa                              >  2:2028660/1‑140 (MQ=255)

                                                                                                      tGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:1603793/130‑1 (MQ=255)

                                                                                                      tGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  2:1405136/130‑1 (MQ=255)

                                                                                                      tGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      >  1:1603793/1‑130 (MQ=255)

                                                                                                      tGTAGATCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      >  1:1405136/1‑130 (MQ=255)

                                                                                                           aTCAAAAACAGGCTGCCGATCTCCAGCGCGGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCAt                       <  1:685608/140‑1 (MQ=255)

                                                                                                           aTCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      <  1:1348594/125‑1 (MQ=255)

                                                                                                           aTCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAgg                                      >  2:1348594/1‑125 (MQ=255)

                                                                                                           aTCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCAt                       >  1:2401874/1‑140 (MQ=255)

                                                                                                            tCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTTAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATc                      <  1:1748708/140‑1 (MQ=255)

                                                                                                            tCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTTAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATc                      >  2:1748708/1‑140 (MQ=255)

                                                                                                            tCAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGAAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATc                      >  2:266176/1‑140 (MQ=255)

                                                                                                             cAAAAACAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCg                     <  1:2100885/140‑1 (MQ=255)

                                                                                                               aaaaCAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAAGAGCACTGCAAGCCATAGCGCCACAACAGGGCTCTCAAAGGTCATCgag                   >  2:825829/1‑140 (MQ=255)

                                                                                                               aaaaCAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCgag                   >  2:341549/1‑140 (MQ=255)

                                                                                                               aaaaCAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCgag                   >  2:173299/1‑140 (MQ=255)

                                                                                                                aaaCAGGCTGCCGATGTCCAGCGCCCTGGCAACCACATACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCgaga                  <  1:936767/140‑1 (MQ=255)

                                                                                                                aaaCAGGCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCgaga                  <  1:2028660/140‑1 (MQ=255)

                                                                                                                     ggCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGa             >  1:2226314/1‑140 (MQ=255)

                                                                                                                     ggCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGa             >  1:2234919/1‑140 (MQ=255)

                                                                                                                     ggCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACAGCCAGCGATAACACCAAAAAAGGGATCTCAGAGGTCATCGAGATCAGa             >  2:767519/1‑140 (MQ=255)

                                                                                                                      gCTGCCGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCTACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGaa            >  2:471779/1‑140 (MQ=255)

                                                                                                                          ccGATCTCCAGCGCCGTGGCAACCACAAACAAGAGCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCAc        >  2:2471735/1‑140 (MQ=255)

                                                                                                                           cGATCTCCAGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCAcc       <  1:2471735/140‑1 (MQ=255)

                                                                                                                               ctcCGGCGCCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCACcagca   >  2:1781255/1‑140 (MQ=255)

                                                                                                                                tcCAGCGCCGTGGCAACCACAACCAAGATCGGGACAAATGTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCACcagcag  <  2:1117424/140‑1 (MQ=255)

AAAAGACCAGCCCCAAGCGATGGGTGCGCATCAAAAACATGCAGCCCATCAGGATCGGTCCGGCGATGATCAATCGGATCAACGGTTCGCCGTATGACCATTTGTAGATCAAAAACAGGCTGCCGATCTCCAGCACCGTGGCAACCACAAACAAGATCGCGACAAATTTGGTGTAAAACGCGTTCGACTGAATACCGTAAAACAGCACTGCCAGCGATAACGCCACAAAAGGGATCTCAAAGGTCATCGAGATCAGAATCACCAGCAG  >  NC_000913/4302691‑4302958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`