| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,441,848 | T→C | Q110R (CAG→CGG) | msrA ← | methionine sulfoxide reductase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,441,848 | 0 | T | C | 99.2% | 422.9 / NA | 119 | Q110R (CAG→CGG) | msrA | methionine sulfoxide reductase A |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (51/67); total (51/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
TTCCAGACTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACG > NC_000913/4441712‑4441982 | ttCCAGACTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCt < 1:146304/140‑1 (MQ=255)ttCCAGACTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCt < 1:2172610/140‑1 (MQ=255)ttCCAGACTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCt < 1:361845/140‑1 (MQ=255) ccAGACTGGCGCGAGCTCCGGCCTCCTGTTCGGGGTTCATCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCa < 2:952506/140‑1 (MQ=255) cTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCt < 2:93780/140‑1 (MQ=255) tGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCtg < 1:1924262/140‑1 (MQ=255) ggCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCtga < 2:2265604/140‑1 (MQ=255) gcgcGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGACCGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTCATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCtgat < 2:2241656/140‑1 (MQ=255) cgAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGAACGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGAc > 2:372169/1‑140 (MQ=255) cTGCGGCATCCTGTTTTGGGGTCAGGGGATAAATCGCAGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 1:962211/140‑1 (MQ=255) cTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGTGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 1:443811/140‑1 (MQ=255) cTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 2:1692138/140‑1 (MQ=255) cTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 2:1800805/140‑1 (MQ=255) cTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 1:1732960/140‑1 (MQ=255) cTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCACTCATAGCTGATGACGGaa < 2:2333397/140‑1 (MQ=255) cTGCGGCATCCTGTTCAGGGGTCAGCGGATACATCACTGCACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGaa < 2:1097187/140‑1 (MQ=255) gCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAgg < 2:2251683/140‑1 (MQ=255) cGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCtgat > 1:133839/1‑130 (MQ=255) cGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCtgat < 2:133839/130‑1 (MQ=255) gCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATc < 1:2284893/140‑1 (MQ=255) ccTGTTCTGGGGTCAGCGGATAGATCGCTGATCGACACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTaa < 2:881215/140‑1 (MQ=255) ccTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTaa < 2:493852/140‑1 (MQ=255) ccTGTTCTGGGGTCAGCCGATATATCGCTGAACGACACTACGTGCCGTCGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTaa < 2:751149/140‑1 (MQ=255) cTGTTCTGGGGTCAGCGTATAAATCGCTGAAGGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTaaa < 2:1026039/140‑1 (MQ=255) gTTCTGGGGTCAGCGGATAAATTGCTGAATGATACTGGGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACa < 1:927127/140‑1 (MQ=255) tCTGGGGTCAGCGGATAAATCGTTGAACGATTCTGGGTGTCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAAt < 2:879974/140‑1 (MQ=255) cTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCGACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATg > 1:1367631/1‑140 (MQ=255) tGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGc > 1:1421467/1‑140 (MQ=255) gggTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGt > 1:1315905/1‑140 (MQ=255) gggTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGt > 1:453517/1‑140 (MQ=255) gggTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCCCTCATAGCTGAGGAAGGAAGGATCGTAAACAATGCGt > 1:977510/1‑140 (MQ=255) gggTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTAGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGt > 2:78405/1‑140 (MQ=255) ggTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTa < 2:1325464/140‑1 (MQ=255) cAGCGGATAAATCGCTGAACGACACTGCGTGCCGTTGTCTTTGCCCTGTCGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCg < 2:876079/140‑1 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGATGGAAGGATCGTAAACAATGCGTACCGc > 2:2166969/1‑140 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACa < 2:2139795/129‑1 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACa > 1:2139795/1‑129 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGc > 2:2351955/1‑140 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGc > 2:2479748/1‑140 (MQ=255) aGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCAAAGCTGATCACGGAAGGATCGTGAACAATGCGTACCGc > 1:687317/1‑140 (MQ=255) gCGGATAAATCGCTGAAGGATACTGCGTGCCCTGGGCATGGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCt < 2:977510/140‑1 (MQ=255) gCGGATAAATCGCTGAACGATACTGTGTGACGTGGTCCTTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCAAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCt < 1:941185/140‑1 (MQ=255) gCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCt < 1:1530683/140‑1 (MQ=255) gCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCt < 2:2447772/140‑1 (MQ=255) aTAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCgg > 1:2285733/1‑140 (MQ=255) tAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCGACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGc < 2:1367631/140‑1 (MQ=255) tAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGc < 1:78405/140‑1 (MQ=255) aaaTCGCTGAACGATACTGCGTGCCGTGGTCATTGTCCTAACGCATTCACTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCa < 2:819424/140‑1 (MQ=255) aaaTCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCa < 1:2355853/140‑1 (MQ=255) aaaTCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTCACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCa < 2:940015/140‑1 (MQ=255) aaTCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCAt < 1:1444317/140‑1 (MQ=255) aTCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATg < 1:2351955/140‑1 (MQ=255) tCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGa < 2:1421467/140‑1 (MQ=255) gCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGAcc > 2:2183995/1‑140 (MQ=255) gCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGAcc > 2:118124/1‑140 (MQ=255) gCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGAcc < 1:2323090/140‑1 (MQ=255) gCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGAACGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGAcc < 1:372169/140‑1 (MQ=255) tACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCAcc > 1:2472112/1‑140 (MQ=255) cGTGCCGTGGTCATTGCGCTGACGCATTCCCGGTGGGGGATCGTGATTGTCCCAAAATCCCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGc < 2:1069348/140‑1 (MQ=255) cGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGc > 1:1512567/1‑140 (MQ=255) gTGCCGTGGTCATTGCCATGACTCATTCCCTGGGCTGGAACGTGATTCCCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTTGGCATGACCCGTATCACCGGAGca < 2:907879/140‑1 (MQ=255) tGCCGTGGTCATTGCGCTGACGCATTCCCGGGGCGGGTTCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGcac < 1:1073855/140‑1 (MQ=255) tGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGcac > 1:623572/1‑140 (MQ=255) tGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAAGGCGTACCCCTTGGGCATGACCGGTATCACCGGAGcac > 1:1199650/1‑140 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACTTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca < 1:81931/136‑1 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACt > 1:1922331/1‑140 (MQ=255) tGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc > 2:330105/1‑140 (MQ=255) cATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGa < 1:118124/140‑1 (MQ=255) aTTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGAt > 1:149942/1‑140 (MQ=255) cTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCg > 2:1646940/1‑140 (MQ=255) gACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGa > 1:1931153/1‑140 (MQ=255) gACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATCACCCGTACCACGGGAGCACACTTCCCGATAAGTCGGa > 1:834975/1‑140 (MQ=255) ttCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCGGTAACCCCTGAGCACAGTTCCCGATAAGTCCGATTTGGc > 2:1163847/1‑140 (MQ=255) ttCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGCATCACCGGAGCACAATTCCCGTTAAGTCGGATTTGGc > 1:917324/1‑140 (MQ=255) tGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 2:82493/1‑140 (MQ=255) ggCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACAGTTCACGATAAGTCCGATTTGGCGTATAgc > 1:815233/1‑140 (MQ=255) cGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAgccg < 1:2396420/140‑1 (MQ=255) cGGGATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAgccg < 2:623572/140‑1 (MQ=255) ggATCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAgccgcc > 1:1508467/1‑140 (MQ=255) aTCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTAACACCGGAGCACACTTCCCGATAAGTGGGATTTGGCGTATAGCCGCCgg > 2:1077731/1‑140 (MQ=255) aTCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGCACCCCAACCAATCCGTACCCCTCCGCCACCACCCGTACCACCGGACCACACTCCCCGATAAGCCGGACTTGCCCCATACCCCCCgg > 2:130088/1‑140 (MQ=255) tCGTGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGt < 1:1322814/140‑1 (MQ=255) tGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc > 1:1705989/1‑123 (MQ=255) tGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc < 2:1705989/123‑1 (MQ=255) tGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGtata < 2:453517/140‑1 (MQ=255) tGATTCTCCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGtata < 2:1315905/140‑1 (MQ=255) ctcCCAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGCTAAGTCGAATTGGGGGTATAGTCGCCGGTATAGCCTg > 1:650494/1‑140 (MQ=255) ccAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTgcgg < 1:1646940/140‑1 (MQ=255) cAAAATACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTgcggc > 2:2409240/1‑140 (MQ=255) aaaaTACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTgcggcg < 1:2010657/140‑1 (MQ=255) aaaaTACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTgcggcg < 2:170016/140‑1 (MQ=255) aaaTACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTCTATCCGCCGATATAGCCTGcggcgg > 1:1161233/1‑140 (MQ=255) aaaTACCTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGcggcgg > 1:115971/1‑140 (MQ=255) ccTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTg > 1:198072/1‑140 (MQ=255) cTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGt > 1:1942468/1‑140 (MQ=255) cTGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGt > 1:282878/1‑140 (MQ=255) tGTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTa > 1:1356045/1‑140 (MQ=255) gTAGCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATATGTCGGATTCGGCGTATAGCCGCCGGGATAGCCTGCGGCGGTGCTGTaa > 2:677916/1‑140 (MQ=255) gCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAAcc > 2:76176/1‑139 (MQ=255) gCAACCGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGAATAGCCGACGGAATAGCCTGCGGCGGTGCTGTAAACg > 1:847122/1‑140 (MQ=255) | TTCCAGACTGGCGCGAGCTGCGGCATCCTGTTCTGGGGTCAGCGGATAAATCGCTGAACGATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGTAGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACG > NC_000913/4441712‑4441982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |