| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,493,414 | A→G | G331G (GGT→GGC) | idnD ← | L‑idonate 5‑dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,493,414 | 0 | A | G | 99.5% | 666.9 / ‑5.0 | 187 | G331G (GGT→GGC) | idnD | L‑idonate 5‑dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (92/93); total (93/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
Only 100 of 189 total aligned reads displayed.
AAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGA > NC_000913/4493282‑4493550 | aTGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAgc > 1:1808590/1‑140 (MQ=255) aTGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTAGGTTTTATCACCGGCGAAACGTAgc > 1:1053067/1‑140 (MQ=255) tGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAgcg < 1:2380822/140‑1 (MQ=255) tGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAgcg > 1:2070050/1‑140 (MQ=255) tgCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTc > 1:407360/1‑140 (MQ=255) cTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCa < 2:1602757/140‑1 (MQ=255) aaacGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGt > 1:523171/4‑140 (MQ=255) aaCCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTa < 2:2288518/125‑1 (MQ=255) aCCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTc < 2:1761680/140‑1 (MQ=255) gTAATTAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTg > 1:528474/1‑140 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAgcgc > 1:1870467/1‑124 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTg > 1:1878653/1‑140 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTg > 2:1997496/1‑140 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTg > 1:1304670/1‑140 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTg < 2:618472/140‑1 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGCCGATACATAGCGCATCTTCCAGGTCAGTg > 1:994758/1‑140 (MQ=255) gTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTAACGCGGGCGAAACGTAGCAGCTCTTCCAGGTCAGTg > 2:1107670/1‑140 (MQ=255) cAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTc > 2:1860254/1‑131 (MQ=255) cAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAggg < 2:1354292/140‑1 (MQ=255) cAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAggg > 1:349891/1‑140 (MQ=255) cAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAggg > 1:1386264/1‑140 (MQ=255) cAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAggg < 2:1827802/140‑1 (MQ=255) tatTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATAtt < 1:1647368/140‑1 (MQ=255) ttttCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGc > 2:1788242/1‑140 (MQ=255) tttCCTGCCAGTGAACATAGATTGTGCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCa < 1:764439/140‑1 (MQ=255) tttCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCa < 1:1412168/140‑1 (MQ=255) tttCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACATAGCGCCACTTACAGGTCAGTGAAGGGATATTCAGCa > 1:849956/1‑140 (MQ=255) ttCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCAc < 2:1431341/140‑1 (MQ=255) ttCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCAc < 2:349891/140‑1 (MQ=255) ttCCTGCCAGTGAAAATAGATCCTTCATTGTATTATTTCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCAc < 1:1107670/140‑1 (MQ=255) ccTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACta < 2:523171/140‑2 (MQ=255) cTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCa > 2:455804/1‑140 (MQ=255) gCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGt > 2:1413612/1‑140 (MQ=255) ccAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTa > 1:2007837/1‑140 (MQ=255) ccAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTa > 1:2080153/1‑140 (MQ=255) cAGTGAAAATAGATCGTTCATTTTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTaa < 1:1099713/140‑1 (MQ=255) gTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAg < 1:153564/140‑1 (MQ=255) aaaaTAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCa < 2:2080153/140‑1 (MQ=255) aaaaTAGATCGTTCATTCTATTCTTCCTTTAATTATCTCCTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCa < 2:830318/140‑1 (MQ=255) aTCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGAtt > 1:2479557/1‑140 (MQ=255) tCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAg > 1:1976077/1‑124 (MQ=255) tCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAg < 2:1976077/124‑1 (MQ=255) tCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGAt > 2:1545949/1‑138 (MQ=255) tCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTg > 2:1952528/1‑140 (MQ=255) gTTCATTGTATTATTCCTTTATTTATCTCTTAGGAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGAGAACGGATATTCAGCACTCAGAAAAGGCAGTGGATTGAt > 2:967958/1‑140 (MQ=255) ttCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATa > 2:2151838/1‑140 (MQ=255) ttCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATa > 2:1264445/1‑140 (MQ=255) tCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGc > 2:2054162/1‑127 (MQ=255) tCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATaa > 2:488554/1‑140 (MQ=255) tGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGcc > 1:1851756/1‑140 (MQ=255) gTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCa < 1:230401/140‑1 (MQ=255) ttattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTc > 1:1771562/1‑140 (MQ=255) tattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 1:1952528/140‑1 (MQ=255) tattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 2:1731946/140‑1 (MQ=255) tattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 1:2053321/140‑1 (MQ=255) tattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 2:1878653/140‑1 (MQ=255) tattCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 2:1224812/140‑1 (MQ=255) ttCCTTTATTTATCTTTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg < 2:1445221/138‑1 (MQ=255) ttCCTTTATTTATCTTTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCg > 1:1445221/1‑138 (MQ=255) ttCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgcc > 2:1817242/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGTTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCAATTCgccagcca > 2:406216/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATGTTCAGCACTCAGAAAAGGCAGTGGATTGATGACGCCATTCgccagcca > 2:709002/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGGAGTAGAATGATAAGGCCATTCgccagcca > 1:707762/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 1:1262512/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 2:1405733/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 1:2142787/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 2:583664/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 1:2023160/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 2:1667210/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgccagcca > 1:1844246/1‑140 (MQ=255) ttatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACACAGGAAATGCAGTGGAATGATAACGCCATTCgccagcca > 2:1124642/1‑140 (MQ=255) tatttatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCAt < 1:156537/140‑1 (MQ=255) tatCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGaca > 2:412412/1‑140 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCAGTCAGTAAAAGCAATAGATTGATAACGCCATGAGCCAGCCGTGACACTg > 2:1192143/1‑140 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCTGCCATGACACTg < 1:493957/140‑1 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTg > 1:1920045/1‑140 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTg < 1:1817496/140‑1 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTg < 1:964898/140‑1 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTg < 1:1734337/140‑1 (MQ=255) ctctTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTg > 1:1676338/1‑140 (MQ=255) ttAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCGGTGGATTCATAACGCCATTCGCCAGCCATGACACTGCgg > 2:1034126/1‑140 (MQ=255) ttAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCgcc > 1:249178/1‑124 (MQ=255) ttAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGGGGATTGACAACGCCCTTCGCCAGCCATGACACTGCgg > 1:1205169/1‑140 (MQ=255) aGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTa > 1:1970329/1‑140 (MQ=255) aGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTa > 2:2203874/1‑140 (MQ=255) aGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCTGCTATGACAGTGCGGTATTAAATTc > 1:1141382/1‑140 (MQ=255) aGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTa < 2:279733/132‑1 (MQ=255) aGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTc > 2:431162/1‑140 (MQ=255) aGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTc > 1:2188469/1‑140 (MQ=255) aGCTGGACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGAAAACACCAATCGCCAGCAATGAAACTGCGGTATTAAATTc > 2:864747/1‑140 (MQ=255) ggACTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTg > 1:444935/1‑140 (MQ=255) aCTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGt < 2:2023160/140‑1 (MQ=255) cTTTTGCTGCCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGGCACTGCGGTATTAAATTCGCTGGTa < 2:444935/140‑1 (MQ=255) gcCTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGaa > 1:2227968/1‑140 (MQ=255) ccTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGaaa > 1:2346038/1‑140 (MQ=255) cTGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAag < 1:2450974/140‑1 (MQ=255) tGGGTTTTATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAaga < 2:1844246/140‑1 (MQ=255) tttATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCctc < 1:1220843/140‑1 (MQ=255) ttATCGCCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCctct > 2:1386761/1‑140 (MQ=255) aTCGCCGGCGAAACGTAGCGCCTCTTCCAGGGCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGa < 2:1053067/140‑1 (MQ=255) | AAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCCTCTTCCAGGTCAGTGAAGGGATATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGA > NC_000913/4493282‑4493550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |