| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,528,706 | A→G | V71A (GTG→GCG) | sgcQ ← | KpLE2 phage‑like element; putative nucleoside triphosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,528,706 | 0 | A | G | 98.7% | 523.2 / ‑3.0 | 151 | V71A (GTG→GCG) | sgcQ | KpLE2 phage‑like element; putative nucleoside triphosphatase |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (64/84); total (64/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
ACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCACCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTC > NC_000913/4528572‑4528842 | cTTAGCGCCGGTAGCCATCGCCCGGACGAATGAGGCGTCCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCg < 1:663056/140‑1 (MQ=255) cTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCg < 1:1909793/140‑1 (MQ=255) cTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCg < 2:1780474/140‑1 (MQ=255) cTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCg < 2:274116/140‑1 (MQ=255) cTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCg < 1:1296058/140‑1 (MQ=255) gcgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgag < 1:111217/140‑1 (MQ=255) gcgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgag > 1:1555219/1‑140 (MQ=255) cgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgaga < 2:188193/140‑1 (MQ=255) cgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgaga > 2:2165784/1‑140 (MQ=255) cgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgaga > 1:188193/1‑140 (MQ=255) cgcCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGACATTGCCGCAGCGGATTCCGGGCGCGCCTTCGTgaga > 1:926203/1‑140 (MQ=255) cgcCGGTAGCCATCGCCAGGTAGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgaga > 1:1409346/1‑140 (MQ=255) ggTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAgg < 2:449298/140‑1 (MQ=255) gTAGCCATCGCCAGGTTGAATGTGGCGACCGTATCTCACCGAACATTCTCGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg < 2:1219280/140‑1 (MQ=255) gTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCTAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg > 2:1470795/1‑140 (MQ=255) gTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg < 1:1241690/140‑1 (MQ=255) gTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg > 1:2468423/1‑140 (MQ=255) gTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg < 1:2216404/140‑1 (MQ=255) gTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGACTCGTGCCAGTGCGGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAggg > 2:857418/1‑140 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCCTTGCCGCAGTGGATTCGGGACGCGCGTTCGGGAGATAGGGAAGACTaa > 2:660063/1‑140 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCATTGGGTTCTGGACGCGCATTCGTGAGATAGGGAAGACTaa > 2:825330/1‑140 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTgag > 1:1575114/1‑126 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGa < 2:2298288/133‑1 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGa > 1:2298288/1‑133 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTaa > 1:1974572/1‑140 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTaa < 1:2232008/140‑1 (MQ=255) cGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTaa < 2:2468423/140‑1 (MQ=255) gCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTaaa < 2:166422/140‑1 (MQ=255) aGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTc < 1:164408/140‑1 (MQ=255) gTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGt > 2:2216872/1‑140 (MQ=255) cGAATGAGGCGACCGGATCCCACAGAACATTCACGTCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTg < 2:736564/140‑1 (MQ=255) aaTGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGTAGACTAAACTCGTTGga > 2:558404/1‑140 (MQ=255) aaTGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGga < 1:2351578/140‑1 (MQ=255) aaTGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGga > 2:616866/1‑140 (MQ=255) aTGAGGCGACCGGATCCCACAGAACATTCACCCCAAACGCGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGgag < 2:958249/140‑1 (MQ=255) aGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAAc < 2:2450792/140‑1 (MQ=255) gCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACTCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACAt > 2:587628/1‑140 (MQ=255) gACCGGATCCCACAGAACATTCTCGCCAAACTGGATGCGTATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGa < 2:888581/140‑1 (MQ=255) caGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccaccc < 1:1747933/140‑1 (MQ=255) gAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccacccca < 1:472857/140‑1 (MQ=255) gAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccacccca < 2:2414697/140‑1 (MQ=255) aaCATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGCCTAAACTGGTTGGAGAACATGACTGCATccaccccac > 1:814585/1‑140 (MQ=255) aaCATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccaccccac > 2:2195503/1‑140 (MQ=255) aCATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccaccccacc > 2:1379488/1‑140 (MQ=255) aCATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccaccccacc > 2:195532/1‑140 (MQ=255) cATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCccacca > 2:1478535/1‑140 (MQ=255) cATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCccacca > 2:2078016/1‑140 (MQ=255) tCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATccaccc > 2:1827171/1‑132 (MQ=255) aCGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑g > 2:210622/1‑140 (MQ=255) ccAAACGGTATGCGGATGTCGCTCATTAATTTCCCAATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 2:1124817/140‑1 (MQ=255) ccAAACGGGATGCGGTTATCGCTCATTAACTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 1:857418/140‑1 (MQ=255) ccAAACGGGATGCGGGTATCGCGCATTAAATGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCACCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 1:867165/140‑1 (MQ=255) ccAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 1:2195503/140‑1 (MQ=255) ccAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 1:374431/140‑1 (MQ=255) ccAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 2:317025/140‑1 (MQ=255) ccAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg > 1:1559955/1‑140 (MQ=255) ccAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAg < 2:1555219/140‑1 (MQ=255) cAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAgc < 1:102403/140‑1 (MQ=255) cAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAgc < 1:2155494/140‑1 (MQ=255) tGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGa < 2:1502418/140‑1 (MQ=255) tGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGa < 2:2278758/140‑1 (MQ=255) gCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGAt < 1:210622/140‑1 (MQ=255) cGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAAGTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATc < 2:1974572/140‑1 (MQ=255) cGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATc < 1:587628/140‑1 (MQ=255) atatCGCTCATTAATTGCCCGATGACTCGCGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTc < 1:825330/140‑1 (MQ=255) tCATTAATTGCCCGATGATTCGTGCTATTACCGCAGTTGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCt < 1:798951/140‑1 (MQ=255) cATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCtt < 2:385055/140‑1 (MQ=255) aTTAATTGGCCGATGACTCGTGACATTGCCAAATTAGTTCCCGGACGCTCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt < 2:1160869/140‑1 (MQ=255) aTTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt > 1:239016/1‑140 (MQ=255) aTTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt < 1:1470135/140‑1 (MQ=255) aTTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt < 1:195532/140‑1 (MQ=255) ttAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTg > 2:166639/1‑140 (MQ=255) aaTTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt > 1:538156/1‑137 (MQ=255) aaTTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCttt < 2:538156/137‑1 (MQ=255) ttGCCCGATGATTCGGGCCATTTCCGCAGGGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGa < 1:1125933/140‑1 (MQ=255) tGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCATCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGAt > 2:1708369/1‑140 (MQ=255) gCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCGTTTT‑GGACCGCCATCAAATCGCCCCAGGCTTTGTCGATa > 2:817307/1‑140 (MQ=255) gCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATa > 2:240069/1‑140 (MQ=255) cccGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCCCCCCACCAGTTT‑GGAGCGCCATCAGATCGTGCCAGGCTTTGTCGATaa > 2:798951/1‑140 (MQ=255) cccGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATaa > 2:1587854/1‑140 (MQ=255) cGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAAcc > 1:1896489/1‑140 (MQ=255) cGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAAcc > 1:62208/1‑140 (MQ=255) gatgatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAAccc < 1:2186653/140‑1 (MQ=255) atgatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGTCATCAGATCGGCCCATTCTTTGTCGATAACCCa > 2:1125933/1‑140 (MQ=255) atgatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCa > 1:2299899/1‑140 (MQ=255) atgatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCa > 1:603616/1‑140 (MQ=255) atgagTCGCGCCATTGCCGCAGTGGTTTCGGGACGCGCCTTCGTGAGGTAGGCTAGACTACACTCGTTGGAGAACATGACTGCATCCACCCAACCATTTTAGGAG‑GCCATCAGATCGACCCAGGCTTTGTCGATAACCCa > 2:936425/1‑140 (MQ=255) gatTCGTGCCATTGCCGCAGTGTTTTCCGGACGCGCCTTCGTGAGATACGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGt < 2:664594/140‑1 (MQ=255) gatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGa > 2:354586/1‑131 (MQ=255) gatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGa < 1:354586/131‑1 (MQ=255) gatTCGTGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGt < 2:1281155/140‑1 (MQ=255) gatTCGTGCCATTGCCGCAGTGCTTTCCGTACGCGCCATCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGt < 1:978121/140‑1 (MQ=255) agacagCCATTGCCGCAGTGGTGTCCGGACGTGCCCTCGTGAGATAGGAAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTc < 2:805713/135‑1 (MQ=255) tGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATGAGATCGTGCCAAGCTTTGTCGTTAACCCAGTTCATcc > 1:772020/1‑140 (MQ=255) tGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATcc > 1:112835/1‑140 (MQ=255) tGCCATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATcc > 1:597423/1‑140 (MQ=255) ccATTGCCGCAGTGGTTTCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATcccc > 1:1629888/1‑140 (MQ=255) cGCAGTGGTTTCCGGACGCGCCTTCGTGAGACAGGAAAGACTAAACTCTTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTgcg < 2:869303/140‑1 (MQ=255) tCCGGACGCGCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACt > 2:1401312/1‑140 (MQ=255) cgcgCCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCATCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTc < 1:1708369/140‑1 (MQ=255) | ACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGCCATTGCCGCAGTGGTTTCCGGACGCACCTTCGTGAGATAGGGAAGACTAAACTCGTTGGAGAACATGACTGCATCCACCCCACCATTTT‑GGAGCGCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTC > NC_000913/4528572‑4528842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |