| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 76,877 | A→G | R141R (CGT→CGC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 76,877 | 0 | A | G | 99.1% | 395.0 / NA | 112 | R141R (CGT→CGC) | sgrR | DNA‑binding transcriptional dual regulator SgrR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (44/66); minor base C (0/1); total (45/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTCGCTTTGTCGCCAACC > NC_000913/76741‑77012 | cTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGGACTGAAGCTTTGCCAGGCGATATGGGTTTCGGAGCgg > 1:639481/1‑140 (MQ=255) ggACGCAAAAAGAAACGCCAGTAAACCGGCGAAATTTTCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAgcggcg < 1:1065698/140‑1 (MQ=255) aCGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCa < 2:1688749/140‑1 (MQ=255) aCGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCa < 1:1294663/140‑1 (MQ=255) cGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCaa < 1:1754765/140‑1 (MQ=255) cGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGACGGGCGATATGGGTTTCGGAGCGGCGCaa > 1:1076416/1‑140 (MQ=255) gCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGTGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAAt > 2:1638279/1‑140 (MQ=255) cAAAAAGGAACCCCAGGGAAGGCGTTAAATTTGCTGGCAGGGGTGGGCGATGTCTTGCTCCAGTTCCCCATTTTCCTCAATTATGCGGGGTTGCGGACTGAAGATTTGCCGGGCGATATTGGTTTCGGAGCGGCGCAATg < 2:2090418/140‑1 (MQ=255) cAAAAAGAAACGCCAGTCAAGCGGTGAAATTCGCTCCCAGTGGTGGGCCATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATg < 2:789308/140‑1 (MQ=255) aaaaaGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgc > 2:2037758/1‑140 (MQ=255) aaaaGAAACGCCAGTGAGGCGGTGAAATTTGATGCCAGTCGTGGGCGACGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgcg < 2:770718/140‑1 (MQ=255) aaaaGAAACGCCAGTGACGCGGTGAAATTTGGTGCGAGTGGTGGGCGACGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgcg < 2:687816/140‑1 (MQ=255) aaaaGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgcg < 1:384851/140‑1 (MQ=255) aaaaGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgcg < 2:503414/140‑1 (MQ=255) aaaGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGCTTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATgcgc < 2:1434622/140‑1 (MQ=255) cAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGCTATGGGTGTCGTAGCGGCGCAATGCGCTGCCAGGTAg > 1:770718/1‑140 (MQ=255) cAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAg > 1:1900725/1‑140 (MQ=255) aGTGAAGCGGTGAAACTTGCTGACACTGGCGGGCGATCTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGc < 1:666284/140‑1 (MQ=255) tGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAgg < 2:1394169/134‑1 (MQ=255) gAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGa < 2:211810/140‑1 (MQ=255) aaGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGCGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGAt < 2:1486314/140‑1 (MQ=255) gCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTa > 2:2455725/1‑140 (MQ=255) gTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGc > 1:1192048/1‑140 (MQ=255) tGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGcc < 2:360238/123‑1 (MQ=255) tGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGcc > 1:360238/1‑123 (MQ=255) tGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCa < 1:560431/140‑1 (MQ=255) tGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCa < 1:1520026/140‑1 (MQ=255) gAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCaa < 1:2395896/140‑1 (MQ=255) gAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCaa < 2:1514581/140‑1 (MQ=255) gAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCaa < 2:272822/140‑1 (MQ=255) aaaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAAc > 2:138570/1‑140 (MQ=255) aaaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAAc > 2:556622/1‑140 (MQ=255) aaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACg < 2:2092362/140‑1 (MQ=255) aaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACg < 2:1361410/140‑1 (MQ=255) aaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACg < 1:1302386/140‑1 (MQ=255) aaTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACg < 1:2306910/140‑1 (MQ=255) aTTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACgg < 2:1557295/140‑1 (MQ=255) tttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGa < 1:496969/140‑1 (MQ=255) tttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGa < 2:939734/140‑1 (MQ=255) tttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGa < 2:57961/140‑1 (MQ=255) tttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGa < 2:1612414/140‑1 (MQ=255) tttGCTGCCAGCGGTGGGCGATATCAGCTCCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGa < 1:949654/140‑1 (MQ=255) ttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGAc < 2:2317703/140‑1 (MQ=255) ttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGAc < 1:1465939/140‑1 (MQ=255) tgctgcCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCaa > 2:6837/1‑134 (MQ=255) tgctgcCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCaa < 1:6837/134‑1 (MQ=255) gctgcCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGa < 1:138570/140‑1 (MQ=255) aGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGAtagtag > 1:89223/1‑140 (MQ=255) aGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGAtagtag > 1:141509/1‑140 (MQ=255) tggtggGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTagag < 2:1336233/140‑1 (MQ=255) tggtggGCGATGTCTGCTTCCAGTTCCCCATTTACCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTagag < 2:1076416/140‑1 (MQ=255) ggtggGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGc < 1:2402954/140‑1 (MQ=255) gtggGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCa < 1:1924782/122‑1 (MQ=255) gtggGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCa > 2:1924782/1‑122 (MQ=255) gtggGCGATGTCTGCCTCCAGTACCACATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGTGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCa < 1:805440/140‑1 (MQ=255) gCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGTGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCAcgcg < 2:2085045/140‑1 (MQ=255) gCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCAcgcg < 1:1829370/140‑1 (MQ=255) gCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCAcgcg > 2:561153/1‑140 (MQ=255) tGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTAGGCAACGGACGATAGTAGAGCACGCGCAgg > 1:703836/1‑140 (MQ=255) tGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCAcgc > 2:2379162/1‑135 (MQ=255) tGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCAcgc < 1:2379162/135‑1 (MQ=255) tGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAgg < 1:556622/140‑1 (MQ=255) cAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTgccgcc > 2:1445801/1‑140 (MQ=255) gTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGcccc < 1:2037758/140‑1 (MQ=255) cccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGc > 2:1587921/1‑140 (MQ=255) cATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCgg > 1:2013607/1‑140 (MQ=255) aTTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGa < 2:314504/140‑1 (MQ=255) aTTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGa < 2:2013607/140‑1 (MQ=255) aTTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGa < 2:1900725/140‑1 (MQ=255) tCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCt > 1:165007/1‑140 (MQ=255) ccTCATTTATGCGCGGTAGCGAGCTGAAGGTTTGCCGAGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTg < 1:1112184/140‑1 (MQ=255) tCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCg < 1:1587921/140‑1 (MQ=255) tATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCa > 1:1508263/1‑140 (MQ=255) cgcgTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATg < 2:2045525/140‑1 (MQ=255) cgcgTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATg < 2:477527/140‑1 (MQ=255) cgTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATgag > 1:1691712/1‑140 (MQ=255) gTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATgaga > 2:435306/1‑140 (MQ=255) ttAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGaa > 2:1743718/1‑140 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCTCGCGCAGGGTGTACCGACCCTGGCGCAAGCAGCGGCCCAGATGAGaaa > 2:853745/1‑140 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCa < 2:1534808/131‑1 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCa > 1:1534808/1‑131 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGaaa > 2:564545/1‑140 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGaaa > 1:377297/1‑140 (MQ=255) aaCTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGc < 2:1751434/140‑1 (MQ=255) cTGAAGATTTGCCGGTCGATATTGGTTTCAGAGCGGCCCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCAt < 1:853745/140‑1 (MQ=255) cTGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCAt < 1:564545/140‑1 (MQ=255) tGAAGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGGAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCAtt > 2:2294208/1‑140 (MQ=255) aaGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTg > 1:2247892/1‑140 (MQ=255) aaGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTg > 1:490139/1‑140 (MQ=255) aGATTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGc < 1:435306/140‑1 (MQ=255) aTTTGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCg < 1:1445801/140‑1 (MQ=255) ttGCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGca < 2:141509/140‑1 (MQ=255) gCCGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGcaca > 2:1467560/1‑140 (MQ=255) ccGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCTCCTGGCGGAAGCCGCGGCCCAGATGAGAAAACAGCATTTCCCGCACAg > 2:1181826/1‑140 (MQ=255) cGGGCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGt < 2:495775/140‑1 (MQ=255) gggCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTc > 1:1368106/1‑140 (MQ=255) gggCGATATGGGTTTCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCATGGCGGAAGCTGAGGCTCAGATGAGAAACCAGCATTTGCCGCACAGTc > 2:738916/1‑140 (MQ=255) tttCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTCGCTTTGTCGcca < 2:26014/140‑1 (MQ=255) tCGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTCGCTTTGTCGccaac > 2:1663266/1‑140 (MQ=255) cGGAGCGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTCGCTTTGTCGccaacc > 2:1236870/1‑140 (MQ=255) | CTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCGATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGGACGATAGTAGAGCACGCGCAGGATGTGCCGCCCCTGGCGGAAGCTGCGGCCCAGATGAGAAACCAGCATTTGCCGCACAGTCGCTTTGTCGCCAACC > NC_000913/76741‑77012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |