| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 527,577 | T→C | intergenic (+36/‑4) | rhsD → / → ybbC | protein RhsD/PF15631 family protein YbbC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 527,577 | 0 | T | C | 98.6% | 749.3 / ‑5.7 | 218 | intergenic (+36/‑4) | rhsD/ybbC | protein RhsD/PF15631 family protein YbbC |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (105/110); total (106/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
CTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGATTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGATAAATACT > NC_000913/527441‑527713 | tGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCaa < 1:2458188/140‑1 (MQ=255) tGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCaa > 2:1700052/1‑140 (MQ=255) aTGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTAGTAGTGGGGCCTATAAGGAGACTCAATg < 2:1763301/140‑1 (MQ=255) gACGATTTGAGGCGCTTAATAAGAATGGAAAATATATCTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGaaa < 1:902470/140‑1 (MQ=255) cGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAata < 2:1232242/140‑1 (MQ=255) aTTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAAtata > 1:1781085/1‑140 (MQ=255) aTTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAACTTTAGTGCCTTTATTAGTGGGGCCTGTAAGCAGACTCAATGAAAtata > 2:902470/1‑140 (MQ=255) ttGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGt < 2:1869050/140‑1 (MQ=255) gcgcTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAat < 2:1727917/140‑1 (MQ=255) cTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATAtt > 1:2268770/1‑140 (MQ=255) cTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATAtt > 1:1418588/1‑140 (MQ=255) ttAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCACATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAatat < 1:367662/140‑1 (MQ=255) ttAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATAttt > 1:1713743/1‑140 (MQ=255) ttAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATAttt > 1:1859812/1‑140 (MQ=255) taataaAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGa < 1:2606/140‑1 (MQ=255) aGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCttt > 2:421976/1‑140 (MQ=255) ggAGAATATATTTTTATAAGAACTAGTGTCCCGGGTTTGCGTTCAGTACG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTc < 2:764914/140‑1 (MQ=255) gaATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTc > 1:1552547/1‑137 (MQ=255) gaATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTc < 2:1552547/137‑1 (MQ=255) gaATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCAtt < 2:2005994/140‑1 (MQ=255) aaTATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCACTGAAATATAGTTGAATATGTTCGATGCTTTCAttt > 2:1066942/1‑140 (MQ=255) aaTATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCAttt > 2:532609/1‑140 (MQ=255) aaTATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACAGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCAttt > 2:2434674/1‑140 (MQ=255) tatTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTta < 1:1310869/140‑1 (MQ=255) tatTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTta < 2:1444781/140‑1 (MQ=255) ttttATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATAc > 1:2043841/1‑140 (MQ=255) ttttATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAAACTCAATGAAATCTAGTTCAATATTGTCGATACTTTCATGTTTTATAc > 2:1156900/1‑140 (MQ=255) ttATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTa < 2:574159/140‑1 (MQ=255) tATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTAt > 2:1533404/1‑140 (MQ=255) tATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTAt > 1:1467636/1‑140 (MQ=255) tATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTAt > 1:2109686/1‑140 (MQ=255) aTCAGAAATAGTGGCCCGGGTTTGAGTTCTGTATG‑‑AATCCTGGATCATGATGAGTTTTAGCGTTTTTATTAGTGGGGCCTATAAGGAGAATCAAGGAAATAGAGTTCAATATTTTCGATCGTTTCATTTTTTATACTAtg < 2:617596/140‑2 (MQ=255) tCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTAttt > 2:1802680/1‑140 (MQ=255) tCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTAttt > 1:1267431/1‑140 (MQ=255) aggAAATAGTGTCCCGGGATTGGGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTg < 1:1078500/138‑1 (MQ=255) gAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACAGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGcc < 1:2434674/140‑1 (MQ=255) aGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTaa < 1:43764/140‑1 (MQ=255) aGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTaa < 2:255860/140‑1 (MQ=255) tgtCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATg > 1:66004/1‑140 (MQ=255) tgtCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTCTCGATGCTTTCTTTTTTTATATTATTTGCCTGTAATg > 1:1197557/1‑140 (MQ=255) tCCCGGGATTGCGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTAGAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATgag > 2:2474657/1‑140 (MQ=255) cccGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATgaga > 1:1431345/1‑140 (MQ=255) ccGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTGGATGCTTACATTTTTTATACTACTTGCCTGTAATgagct > 2:1078500/1‑138 (MQ=255) ccGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGAc < 1:532609/140‑1 (MQ=255) ccGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGAc > 1:2150686/1‑140 (MQ=255) ccGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGAc > 2:1668608/1‑140 (MQ=255) gATTGAGTTCAGTATA‑‑CATACCATATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCt < 1:1066942/140‑1 (MQ=255) aGTTCAGTATG‑‑CATACCGTATCTTGTTTATTTTTAGTTCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTa < 1:1085315/140‑1 (MQ=255) aGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGtt > 2:1325408/1‑140 (MQ=255) aGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTAGACTCTTTGCCTGTAATGAGACAGCTGTTTACGGtt > 2:810826/1‑140 (MQ=255) g‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCtgat < 2:2017927/140‑1 (MQ=255) g‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCtgat > 2:158575/1‑140 (MQ=255) g‑‑CATACCGAATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCtgat > 2:1386851/1‑140 (MQ=255) aTACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTa < 1:1822909/128‑1 (MQ=255) aTACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTa > 2:1609277/1‑128 (MQ=255) aTACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCtgatga > 2:2377041/1‑140 (MQ=255) ttccGTATCATGATTCATTTTATTGCTTTGATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaa < 1:1027307/138‑1 (MQ=255) tACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaa < 2:2139850/140‑1 (MQ=255) tACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaa < 1:221698/140‑1 (MQ=255) tACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaa < 1:1246315/140‑1 (MQ=255) ccGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaaaa > 2:2090832/1‑140 (MQ=255) ccGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGaaaa > 1:1573344/1‑140 (MQ=255) ccGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATGTGCTTGTCATGAGACAGCTGTTTACGGTTCTGATGaaaa > 2:1027307/1‑140 (MQ=255) cGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTGCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAAc < 2:1620406/140‑1 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTGTACTATTTCCCTGTAAGGAGACAGCGGTTTGCGGTTCTGATGAAAACa > 2:708817/1‑140 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACa > 2:65194/1‑140 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACa > 2:1640001/1‑140 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACa < 1:1333672/140‑1 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACa > 2:1926192/1‑140 (MQ=255) gTATCATGATTAATTTTAGTGCTTTTATTAGCGGGGCCTATAAGGAGGCTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACa < 1:304308/140‑1 (MQ=255) aTCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCt > 1:591234/1‑128 (MQ=255) aTTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAAGGAGGCAGGTGTTTACGCTTCTGATGAAAACATTAttttt > 2:747161/1‑140 (MQ=255) aTTAATTTTAGTGCTTTCATTATTGGGGCCTCTAACGAGCCTCAATGAGATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTAttttt < 2:662307/140‑1 (MQ=255) ttAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTa > 1:2320889/1‑140 (MQ=255) ttAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTa > 2:1822576/1‑140 (MQ=255) ttAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTa > 1:1002572/1‑140 (MQ=255) ttAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTa > 2:2312340/1‑140 (MQ=255) tAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTAt < 2:1850490/140‑1 (MQ=255) aaTTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGATTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATg < 2:443461/140‑1 (MQ=255) aaTTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATg > 1:97478/1‑140 (MQ=255) aaTTTTAGGGCTTTTAATAGTGTGGCCTATCCGAAAACTAAATGAAATCTAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATg < 2:1209736/140‑1 (MQ=255) ttttAGTGCTTTTATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAg < 1:421976/140‑1 (MQ=255) ttAGTGCTTTTATTAGTGGGGCCTATAAGGACACTCAATCAAATATAGGTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGt < 2:867146/140‑1 (MQ=255) tttATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGaa < 2:2043841/140‑1 (MQ=255) tttATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGaa < 1:1926192/140‑1 (MQ=255) tttATTAGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGaa > 1:1990710/1‑140 (MQ=255) ttaGTGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAAt < 2:1418588/140‑1 (MQ=255) tGGGGCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACa > 1:476842/1‑140 (MQ=255) gacagCCTATAAGGAGATTCAAGGAAATATATTTCAATATTTTCGATGATTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACa < 2:822758/136‑1 (MQ=255) gggCCTATAAGGAGACTCAATGTAATATAGTTCAATAGTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 1:708817/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGCAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 1:814782/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTGGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 1:1689476/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 2:320762/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 1:2474657/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 2:1990710/140‑1 (MQ=255) gggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACAtt < 2:1270646/140‑1 (MQ=255) ggCCTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGaa < 1:2010427/129‑1 (MQ=255) cTATAAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGa < 1:1650534/140‑1 (MQ=255) ataAGGAGACTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGATa > 2:2184369/1‑140 (MQ=255) agaCTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTGATGAGGTGTGTAGAGAAATTAGATTTAGATAAATAct > 1:768692/1‑140 (MQ=255) | CTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATG‑‑CATACCGTATCATGATTAATTTTAGTGCTTTTATTAGTGGGGCCTATAAGGAGATTCAATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGATAAATACT > NC_000913/527441‑527713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |