BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,629,935	T→C	E196E (GAA→GAG)	ettA ←	energy‑dependent translational throttle protein EttA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,629,935	0	T	C	100.0%	378.3 / NA	108	E196E (GAA→GAG)	ettA	energy‑dependent translational throttle protein EttA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (68/40); total (68/40)

Only 100 of 112 total aligned reads displayed.

CTTCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGATTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCGGCAGACGTA  >  NC_000913/4629799‑4630071

cTTCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCg                                                                                                                                       >  1:2194857/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGGAGTGGTGAAGGAAGCGGTCCAACCAGGCCACGGACTCgg                                                                                                                                      >  2:863591/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCgg                                                                                                                                      >  1:2360654/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCgg                                                                                                                                      >  2:2358659/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCgg                                                                                                                                      >  2:2037535/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCgg                                                                                                                                      >  2:2291668/1‑140 (MQ=255)

 ttCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCgg                                                                                                                                      >  1:326201/1‑140 (MQ=255)

  tCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGc                                                                                                                                     <  1:2244072/140‑1 (MQ=255)

  tCCCACGGAATACCTCCACCGCAGTCAAGTTCGAGGACCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGc                                                                                                                                     <  1:663641/140‑1 (MQ=255)

   cccACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCa                                                                                                                                    >  1:134881/1‑140 (MQ=255)

   cccACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCa                                                                                                                                    <  2:2058197/140‑1 (MQ=255)

   cccACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCa                                                                                                                                    >  1:2158982/1‑140 (MQ=255)

   cccACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCa                                                                                                                                    >  1:2041727/1‑140 (MQ=255)

   cccACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCa                                                                                                                                    >  2:1334064/1‑140 (MQ=255)

       cGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATACa                                                                                                                                >  2:1493135/1‑140 (MQ=255)

          aaTACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAggt                                                                                                                             <  2:394219/140‑1 (MQ=255)

                 tCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGtggttggt                                                                                                                      >  2:2323888/1‑140 (MQ=255)

                  cACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTc                                                                                                                     >  1:1479952/1‑140 (MQ=255)

                    ccGCGGTCAAGTTCGAGGTTCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCgg                                                                                                                   >  2:1584166/1‑140 (MQ=255)

                    ccGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGCAGTAACGGTCGTGGGCAATCGCCACAACGGTGCCTTCGAAGTCGTGCAAGAAGCGTTGCAGGCAGGCCACGGACGCGGCTTCCAGGTGGTTGGTCgg                                                                                                                   >  2:1015854/1‑140 (MQ=255)

                    ccGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCTGCCAGGCAACGGACGCGGCATACAGGTGGTTGGTCgg                                                                                                                   >  1:714594/1‑140 (MQ=255)

                    ccGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCgg                                                                                                                   >  1:394046/1‑140 (MQ=255)

                    ccGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCgg                                                                                                                   >  2:143607/1‑140 (MQ=255)

                       cgGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCATGCCACGGACTCGTCATCTAGGTGGTTGGTCGGTtc                                                                                                                >  2:903489/1‑140 (MQ=255)

                        ggTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAACGTTCCAGCCAGGCCAAGGACTCGGGATCCAGGTGGTTGGTCGGTtcg                                                                                                               >  2:1033982/1‑140 (MQ=255)

                          tCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTtcgtc                                                                                                             <  2:1750423/140‑1 (MQ=255)

                              gTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGagc                                                                                                         <  2:473949/140‑1 (MQ=255)

                              gTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGagc                                                                                                         <  1:1880275/140‑1 (MQ=255)

                                   aGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGagcagcag                                                                                                    <  2:612345/140‑1 (MQ=255)

                                    ggATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGagcagcagc                                                                                                   <  1:2037535/140‑1 (MQ=255)

                                        ccAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTtcg                                                                                                               >  1:2017937/1‑124 (MQ=255)

                                        ccAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTtcg                                                                                                               <  2:2017937/124‑1 (MQ=255)

                                        ccAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGt                                                                                               <  2:1855687/140‑1 (MQ=255)

                                              tGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGtt                                                                                         <  1:2144309/140‑1 (MQ=255)

                                               gCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGttt                                                                                        >  1:1461397/1‑140 (MQ=255)

                                                cAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTTGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGtttt                                                                                       >  1:1301159/1‑140 (MQ=255)

                                                cAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGtttt                                                                                       >  2:1392793/1‑140 (MQ=255)

                                                cAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGtttt                                                                                       >  1:1749941/1‑140 (MQ=255)

                                                cAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGtttt                                                                                       >  1:508319/1‑140 (MQ=255)

                                                       aTCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTAGGTTCGTAGAGAAGAAGCATGTCTGGTTTTTCcagca                                                                                >  1:977272/1‑140 (MQ=255)

                                                            ggAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAgg                                                                           <  2:2273610/140‑1 (MQ=255)

                                                            ggAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAgg                                                                           <  1:1866549/140‑1 (MQ=255)

                                                            ggAAGTAACGGTCGTGGGTAATCGCCACAACAGTGACTTGGAAGTCGTTCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAgg                                                                           <  2:950039/140‑1 (MQ=39)

                                                             gAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAggc                                                                          >  1:47206/1‑140 (MQ=255)

                                                               aGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAggcgg                                                                        >  1:324484/1‑140 (MQ=255)

                                                               aGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAggcgg                                                                        <  2:306295/140‑1 (MQ=255)

                                                               aGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAggcgg                                                                        >  1:306295/1‑140 (MQ=255)

                                                               aGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGGGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAggcgg                                                                        >  1:1968435/1‑140 (MQ=255)

                                                                 tAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGca                                                                      <  2:2360654/140‑1 (MQ=255)

                                                                  aaCGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGcac                                                                     >  2:1647927/1‑140 (MQ=255)

                                                                  aaCGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTAGGTTCGTCGAGCGGCAACATGTCTGTTTTTCCCAGCAGCAGGCGGcac                                                                     >  2:768329/1‑140 (MQ=255)

                                                                      gTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGGAGCATGTGTGGATTGTCCAGCGGCAGGCGGCACAACg                                                                 >  1:663933/1‑140 (MQ=255)

                                                                      gTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACg                                                                 >  1:228441/1‑140 (MQ=255)

                                                                       tCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGc                                                                >  2:1609092/1‑140 (MQ=255)

                                                                        cGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCTTCGAGCAGGAGCATGTCTGGTTTTTGCAGCGGCAGGCGGTACAACGCt                                                               >  2:1124480/1‑140 (MQ=255)

                                                                        cGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCt                                                               >  2:2269123/1‑140 (MQ=255)

                                                                              tAATCGCCACAACGGTGCCTTCAAAGTCGTGCAGGTAGCCTTCCAGCCCGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGcga                                                         <  2:714594/140‑1 (MQ=255)

                                                                                aTCGCCACAACGGTGCCTTCGAGGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGcgacg                                                       <  1:907108/140‑1 (MQ=255)

                                                                                aTCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGcgacg                                                       <  2:2194857/140‑1 (MQ=255)

                                                                                 tCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGcgacga                                                      >  1:427238/1‑140 (MQ=255)

                                                                                 tCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGcgacga                                                      >  1:1411498/1‑140 (MQ=255)

                                                                                   gCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGacgacg                                                    <  2:1965938/140‑1 (MQ=255)

                                                                                   gCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGacgacg                                                    <  2:1461397/140‑1 (MQ=255)

                                                                                   gCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGacgacg                                                    <  1:2269123/140‑1 (MQ=255)

                                                                                     cacaACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGtt                                                  <  2:2433918/140‑1 (MQ=255)

                                                                                     cacaACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGtt                                                  >  1:2248964/1‑140 (MQ=255)

                                                                                     cacaACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGtt                                                  <  1:1334064/140‑1 (MQ=255)

                                                                                     cacaACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGtt                                                  >  1:1241339/1‑140 (MQ=255)

                                                                                      acaACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTATTCCAGCAGCAGGCGGTACAACGCTACGCGACGACGTTc                                                 >  2:953010/1‑140 (MQ=255)

                                                                                        aaCGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTcac                                               <  2:1923516/140‑1 (MQ=255)

                                                                                        aaCGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTACCAACAGAAGGCGGCAAAACGCTACGCGACGACGTTcac                                               >  2:842369/1‑140 (MQ=39)

                                                                                          cGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTcacca                                             <  1:2291668/140‑1 (MQ=255)

                                                                                            gTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCCGCAGGCGACACAACTCTACGCAACGACGTTCaccacc                                           >  1:1105504/1‑140 (MQ=39)

                                                                                             tGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCg                                          >  1:1827436/1‑140 (MQ=255)

                                                                                               ccTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        <  2:1842261/140‑1 (MQ=255)

                                                                                               ccTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        >  1:2448710/1‑140 (MQ=255)

                                                                                               ccTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        <  2:427238/140‑1 (MQ=255)

                                                                                               ccTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        >  1:475503/1‑140 (MQ=255)

                                                                                               ccTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        <  2:2448710/140‑1 (MQ=255)

                                                                                                cTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGgag                                       <  2:2158982/140‑1 (MQ=255)

                                                                                                    gAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGt                                   >  2:1390443/1‑140 (MQ=255)

                                                                                                         cGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        >  2:2490963/1‑130 (MQ=255)

                                                                                                         cGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGga                                        <  1:2490963/130‑1 (MQ=255)

                                                                                                         cGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCg                              >  1:1425387/1‑140 (MQ=255)

                                                                                                         cGTGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCg                              >  1:26732/1‑140 (MQ=255)

                                                                                                           tGCAGGAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGAt                            >  2:1797080/1‑140 (MQ=255)

                                                                                                                gAAGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTcg                       <  2:1367398/140‑1 (MQ=255)

                                                                                                                  aGCGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTcgcg                     >  1:332982/1‑140 (MQ=255)

                                                                                                                    cGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTc                   >  2:2395976/1‑140 (MQ=255)

                                                                                                                    cGTTCCAGCCAGGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTc                   >  1:2445546/1‑140 (MQ=255)

                                                                                                                         cagccagGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGt              <  2:332982/140‑1 (MQ=255)

                                                                                                                          agccagGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTc             >  2:1519074/1‑140 (MQ=255)

                                                                                                                             cagGCCACGGGCTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCgg          <  2:333644/140‑1 (MQ=255)

                                                                                                                             cagGCCACGGACTCGGCGTCCATGTGGTTGGCCGGCTCGGCGAGCAGCTGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCgg          <  2:1015122/140‑1 (MQ=255)

                                                                                                                             cagGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCgg          <  2:2115782/140‑1 (MQ=255)

                                                                                                                             cagGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCgg          <  2:425693/140‑1 (MQ=255)

                                                                                                                             agggCCACGGACTCGGCATCCACGTGGTTGGGCGGTTCGTCGAGCAGCTGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGTGATTTTCGCGTCCCAGTCCgg          <  2:1029335/138‑1 (MQ=255)

                                                                                                                              agGCCACGGACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCGGc         >  2:1293721/1‑140 (MQ=255)

                                                                                                                                     ggACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCGGCAGACGTa  <  2:1425387/140‑1 (MQ=255)

                                                                                                                                     ggACTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGAAGAAGTTAGCGATTTTGGCGTCCCAGTCCGGCAGACGTa  >  2:1019928/1‑140 (MQ=255)

CTTCCCACGGAATACCTTCACCGCGGTCAAGTTCGAGGATCCAGCCTGCAACGTTATCGAGGAAGTAACGGTCGTGGGTAATCGCCACAACGGTGCCTTCGAAGTCGTGCAGGAAGCGTTCCAGCCAGGCCACGGATTCGGCATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCATGTCTGGTTTTTCCAGCAGCAGGCGGCACAACGCTACGCGACGACGTTCACCACCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCGGCAGACGTA  >  NC_000913/4629799‑4630071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`