| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 596,751 | T→C | R384R (CGT→CGC) | cusC → | copper/silver export system outer membrane channel |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 596,751 | 0 | T | C | 99.2% | 437.3 / NA | 124 | R384R (CGT→CGC) | cusC | copper/silver export system outer membrane channel |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (62/61); minor base G (1/0); total (63/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GATCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGTCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGTTCTT > NC_000913/596616‑596884 | gaTCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCaaa > 1:307938/1‑140 (MQ=255) aTCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAg > 2:1659984/1‑140 (MQ=255) cATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGTAGTGGCAGATGCACTGGCGTTACGCCAAAGCCTGa > 2:1174808/1‑140 (MQ=255) cATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGa < 2:1245970/140‑1 (MQ=255) cATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGa < 1:1929797/140‑1 (MQ=255) cATTTTTAATGCCGGACGAAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGa < 2:1284917/140‑1 (MQ=255) tttttAATGCCGGACGTCACCATGCCAATCTAGTTTTCGCCGAAATTCTCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAAc < 2:1187732/140‑1 (MQ=255) ttAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGAt > 2:264252/1‑140 (MQ=255) aTGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCaa > 2:2112731/1‑140 (MQ=255) aTGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCaa > 2:249260/1‑140 (MQ=255) ggACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATACGCTGGCGTTAGGCTAAAGCCGGAACGATCAAATTAg > 1:676765/1‑140 (MQ=255) ggACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATACGCTGGCCTTAGGCCAAAGCCGGAACGATCAAATTAg > 1:889355/1‑140 (MQ=255) gACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGa > 1:1501735/1‑126 (MQ=255) gACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGa < 2:1501735/126‑1 (MQ=255) gACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAgc > 2:1882385/1‑140 (MQ=255) gACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAgc > 2:1697947/1‑140 (MQ=255) gACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAgc > 1:560001/1‑140 (MQ=255) gCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGcc < 1:559074/140‑1 (MQ=255) aaCCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCca > 1:383957/1‑140 (MQ=255) aaCCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCca < 2:602625/140‑1 (MQ=255) aaCCAGGCCAATCTGGACATCGACGAAATTCCCCACCAGTAGTCGGTGTTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCca < 2:676765/140‑1 (MQ=255) ccAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCcagc > 2:1534115/1‑140 (MQ=255) ggCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCagcagc > 1:1859010/1‑140 (MQ=255) gCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCg > 1:1685766/1‑140 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCg < 1:402726/136‑1 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCg > 2:402726/1‑136 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTAt > 2:1620882/1‑140 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTAt > 2:2155659/1‑140 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTAt > 1:1415561/1‑140 (MQ=255) aTCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTAGCATTACGGCAAAGCCTGAACGATCGAATTGGCGCCCAGCAGCGTTAt > 2:654544/1‑140 (MQ=255) tCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATc > 1:2341218/1‑140 (MQ=255) cTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCt > 2:2447056/1‑140 (MQ=255) cTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCt > 1:348344/1‑140 (MQ=255) gATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGc > 2:1991463/1‑140 (MQ=255) tCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCg < 1:1991463/140‑1 (MQ=255) tCGCCGAAATTCGCCAGCAGCAGTCGGTGGCGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCg < 2:348344/140‑1 (MQ=255) cGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCATAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAAAGATCAAATTAGTGCACAGCAGTGTTATCTGGCATCGc > 1:849301/1‑140 (MQ=255) cGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGc > 1:1041802/1‑140 (MQ=255) cGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGc > 1:335983/1‑140 (MQ=255) cGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGc > 1:1342819/1‑140 (MQ=255) ccGAAATTCGCCAGCAGCAGTCCGTGGTGAACTATCAACTGAAAATCCTTAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTg < 2:849301/140‑1 (MQ=255) aaaTTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGGCTGAACGATCAAATTACCGCCCAGCAGCGTTATCTGGCATCGCTGCaa > 2:1057621/1‑140 (MQ=255) aaaTTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCaa > 1:1941080/1‑140 (MQ=255) gCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCaaa < 2:1892240/135‑1 (MQ=255) cagcagTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCa < 2:1712098/140‑1 (MQ=255) gTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACggg > 1:7681/1‑140 (MQ=255) tCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGgc < 2:1342819/140‑1 (MQ=255) cGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGgcg < 1:1621661/140‑1 (MQ=255) cGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGgcg < 1:1620882/140‑1 (MQ=255) cGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGgcg < 1:2155659/140‑1 (MQ=255) gtggtgAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg < 2:307938/140‑1 (MQ=255) gtgAATTATGAACAGTAAATCCTGATCGCCTTTAAAGGAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGc < 1:1174808/140‑1 (MQ=255) gtgAATTATGAACAGGAAATCCAGAACGCTTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGc < 1:1077647/140‑1 (MQ=255) gtgAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGc < 1:249260/140‑1 (MQ=255) gtgAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGc < 1:2112731/140‑1 (MQ=255) gtgAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGc < 2:335983/140‑1 (MQ=255) gAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCAt < 2:1041802/140‑1 (MQ=255) gAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCAt < 1:264252/140‑1 (MQ=255) gAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCAt < 1:385066/140‑1 (MQ=255) aTTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATta > 2:2159034/1‑140 (MQ=255) tGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATc > 1:2133955/1‑140 (MQ=255) tGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTCATCTGGCACCGCAGCATATTACTTTACAACGGGCGCGGGCATTATATc > 2:1018006/1‑140 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg > 2:2086950/1‑127 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg < 2:2011867/127‑1 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg > 1:2011867/1‑127 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg < 1:2086950/127‑1 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCa > 2:291186/1‑131 (MQ=255) aaCAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCa < 1:291186/131‑1 (MQ=255) aGAAAATCCAGAACGTCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCAc < 1:1018006/140‑1 (MQ=255) aGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGgcg > 1:76585/1‑122 (MQ=255) aGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg > 2:38458/1‑124 (MQ=255) aGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGcgcg < 1:38458/124‑1 (MQ=255) aGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCAc < 1:2447056/140‑1 (MQ=255) aGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCAc < 2:1859010/140‑1 (MQ=255) aaaaTCCAGAACGCCTTTAAAGTAGTGGCAGTTGCCCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACgg < 2:889355/140‑1 (MQ=255) aaaaTCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCa < 2:1787398/126‑1 (MQ=255) aaaaTCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCa > 1:1787398/1‑126 (MQ=255) aaaaTCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGACGCGGGAATTATATCAGCACgg > 1:803610/1‑140 (MQ=255) aaTCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGgcg < 2:2341218/140‑1 (MQ=255) aTCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATGGCTGCAAATTACGTTGAAACGGGCGCGGGCATTATATCAGCACGtcgc > 2:972724/1‑140 (MQ=255) tCCAGAACGCCTTTACAGAAGTCGCTGATACGCTGGCCTTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCa < 1:654544/140‑1 (MQ=255) ccAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAg > 2:395875/1‑140 (MQ=255) cAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGt < 2:383957/140‑1 (MQ=255) gAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCTGGCATTatat < 2:2302435/124‑1 (MQ=255) gAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCTGGCATTatat > 1:2302435/1‑124 (MQ=255) aaCGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAg < 1:1659984/140‑1 (MQ=255) aaCGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAg < 1:1340829/140‑1 (MQ=255) tttAAAGAAGTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCt < 1:1534115/140‑1 (MQ=255) gTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTgg > 1:1346730/1‑133 (MQ=255) gTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCt > 2:1828603/1‑140 (MQ=255) gTGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCt > 2:2092450/1‑140 (MQ=255) tGGCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTg < 2:2133955/140‑1 (MQ=255) gCAGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGa > 2:272126/1‑140 (MQ=255) aGATGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATg > 2:1984540/1‑140 (MQ=255) tGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCg > 2:624456/1‑140 (MQ=255) tGCGCTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCg > 2:2022259/1‑140 (MQ=255) cgcTGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAg < 2:2058539/140‑1 (MQ=255) agacagCATTACGCCAAAGCCTGAACGATGAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAg < 1:1073433/135‑1 (MQ=255) tGGCATTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGt < 2:1415561/140‑1 (MQ=255) aTTACGCCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGTTCtt < 2:7681/140‑1 (MQ=255) | GATCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGTCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGTTCTT > NC_000913/596616‑596884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |