| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 657,119 | A→G | intergenic (+2/‑173) | pagP → / → cspE | Lipid IVA palmitoyltransferase/transcription antiterminator and regulator of RNA stability |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 657,119 | 0 | A | G | 98.4% | 661.5 / ‑3.1 | 191 | intergenic (+2/‑173) | pagP/cspE | Lipid IVA palmitoyltransferase/transcription antiterminator and regulator of RNA stability |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (107/80); total (109/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 194 total aligned reads displayed.
TTACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACAC > NC_000913/656985‑657254 | ttACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAAt < 1:360735/140‑1 (MQ=255) tACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATg > 1:285379/1‑140 (MQ=255) aCATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGa > 2:2403368/1‑140 (MQ=255) gagacagctcCCGGTTCTACTGTCATTGGTCTCCGTGAGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGaa < 1:846227/133‑1 (MQ=255) tCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGTAATGTGTAGTTTGCCTGGATGCGCTATCAGGTTTGAGGCAAATGactg > 2:747054/1‑137 (MQ=255) tCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGt > 2:2381911/1‑140 (MQ=255) ctctCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAAAGTGTACTTTGCCCGGACGCGCTTTCAGTTTTGAGGCAAATGAAGtttt > 2:821245/1‑140 (MQ=255) ctcCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAg > 2:547462/1‑140 (MQ=255) tcCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGt > 2:2421209/1‑140 (MQ=255) tcCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGt > 1:49253/1‑140 (MQ=255) tcCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGt > 2:2084524/1‑140 (MQ=255) ccGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCaaa < 2:2289963/126‑1 (MQ=255) ccGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCaaa > 1:2289963/1‑126 (MQ=255) cGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAAc < 1:1686912/140‑1 (MQ=255) gTTCTACTGCCATTGGCCTCCGTGGGATATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGCACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAActt > 2:294607/1‑140 (MQ=255) tCTACTGCCATTGGCTTCCGTGAGTAATGTCCCAGTGTCTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGAAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAActtct < 1:689719/140‑1 (MQ=255) cTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAActtctt > 2:1625022/1‑140 (MQ=255) cTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAActtctt > 1:376388/1‑140 (MQ=255) tACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAAct < 2:2223500/135‑1 (MQ=255) aTTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCa < 1:29644/140‑1 (MQ=255) aTTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCa > 1:2269751/1‑140 (MQ=255) gCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAg > 1:2192155/1‑140 (MQ=255) cGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAActtct > 2:1361753/1‑122 (MQ=255) cGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAg > 1:2209411/1‑135 (MQ=255) cGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGc > 1:414559/1‑136 (MQ=255) cGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGc < 2:414559/136‑1 (MQ=255) ttATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGt < 1:58987/140‑1 (MQ=255) tATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTa < 1:1625022/140‑1 (MQ=255) ggCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAGATGAAGTTGTAGCAACATCTTTAAATTCAATAGCTAAAATAAGTAACa > 2:714165/1‑140 (MQ=255) ggCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACa > 2:2324080/1‑140 (MQ=255) cAGTGACTTTTCAGATGACCTAC‑‑TCCGGGTACCTACAACAAT‑GCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGt < 1:1233364/129‑1 (MQ=255) aGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGTCAAATGAAGTTTTAGTTACTTCTTTAAAATCAAAAGCTTAAATAAGTAACATCaaa > 2:1053437/1‑140 (MQ=255) aGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCaaa > 1:2228084/1‑140 (MQ=255) aGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCaaa > 2:1732336/1‑140 (MQ=255) tGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCaaaaa > 2:1995764/1‑140 (MQ=255) tttCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAAcg > 2:1478284/1‑140 (MQ=255) tttCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAAcg < 1:1949885/140‑1 (MQ=255) tCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAAcgcg < 1:2324080/140‑1 (MQ=255) tCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAAcgcg < 2:1288538/140‑1 (MQ=255) ccTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTAt < 2:2258546/140‑1 (MQ=255) ccTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTAt < 1:2462288/140‑1 (MQ=255) cATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACt < 1:2421209/140‑1 (MQ=255) ccGGGTACCTACAACTATGGCAATGTGTATTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACttttt < 1:821245/140‑1 (MQ=255) cGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTa > 1:144259/1‑140 (MQ=255) cGGGTACCTACAACAATGGCAATGAGTACTTTGCCTGGATGTGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAATTAAGTAACATGAAAAATAACGCGACTTTTATCACTTTTTa > 2:590984/1‑140 (MQ=255) gggTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAg < 2:144259/140‑1 (MQ=255) gggTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAg < 2:1331543/140‑1 (MQ=255) gggTACCTACAACAACGGCAATATGCACTTTGCCTGGCTGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAg < 1:1175025/140‑1 (MQ=255) acagaCCTACAACAACGGCAATGTGTACTGTGCCTGGTTGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGGCTTTTATCACTTTTTAg < 1:969409/136‑1 (MQ=255) ggTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATATCTAAAATAAGTATCATGAAAAATAAAGCGAGATTTATCAATTTTTAGt > 2:1175025/1‑140 (MQ=255) ggTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGt > 2:1601507/1‑140 (MQ=255) aCCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTaaa > 2:2143584/1‑140 (MQ=255) ccTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAg > 2:1946189/1‑140 (MQ=255) ccTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAg < 1:1732336/140‑1 (MQ=255) tACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATGAAAAATAACGCTACCTTTATCACTTTTTAGTAAAGtt > 1:1090684/1‑140 (MQ=255) acaacaATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAAAAAGTAACAGCAAAAATAACGCGACTATTATCACTTTTTAGTAAAGTTa > 2:940269/1‑140 (MQ=255) aacaaTGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTaca < 1:1601507/140‑1 (MQ=255) aaTGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTg > 1:1859064/1‑140 (MQ=255) tGGCAGTGCGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGa > 1:2199835/1‑140 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTATAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGa > 1:260803/1‑140 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAg > 2:1717094/1‑130 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTaca < 1:1328216/135‑1 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGa > 2:2444827/1‑140 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGa > 2:539544/1‑140 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGa > 1:1801391/1‑140 (MQ=255) tGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTATTAGCAGTTTTTAATAAAGTTACACTGGa > 1:732967/1‑140 (MQ=255) ggCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAAGGCGACTTTTATTACGTTTTAGTAAAGTTACACTGGAc > 1:1129208/1‑140 (MQ=255) gCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACa < 1:1493867/140‑1 (MQ=255) aaTGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACaaa > 2:2360890/1‑140 (MQ=255) aaTGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACaaa < 1:2143584/140‑1 (MQ=255) aTGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACa > 1:1939093/1‑137 (MQ=255) aTGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACATTTATCACTTTTTAGTAAAGTTACACTGGACAAAg > 2:1411429/1‑140 (MQ=255) tgtgTACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGc < 1:2381924/140‑1 (MQ=255) gtgtACTTTGCCTGGATGCGCTTTCTGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCg < 1:1053437/140‑1 (MQ=255) gtgtACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCg < 2:977315/140‑1 (MQ=255) gtgtACTTTGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTATAATAAAGTCACACTGGACAAAGCg > 1:1180820/1‑140 (MQ=255) tttGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACcac < 2:2280951/140‑1 (MQ=255) tttGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACcac < 2:122791/140‑1 (MQ=255) tGCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACaa > 1:2075091/1‑140 (MQ=255) gCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACcac < 1:1400238/137‑1 (MQ=255) gCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACcac > 2:1400238/1‑137 (MQ=255) gCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAAt < 2:2192155/140‑1 (MQ=255) gCCTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACGTTTTAGTGAAGATATACTGGATAAAGCGTACCACAAt > 1:631706/1‑140 (MQ=255) ccTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCATTTTTTAGCAAAGTTACACTGGTCAAAGCGTACCACAAtt > 2:956960/1‑140 (MQ=255) ccTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAAtt > 2:1352258/1‑140 (MQ=255) ccTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAAtt > 1:1771296/1‑140 (MQ=255) ccTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGGAAAGTTACACTGGACAAAGCGTACCACAAt > 2:1090814/1‑139 (MQ=255) cTGGATGCGCTTTCAGTTTTGAGTCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACGTTTATCACGTTTGAGTTAAGTTACAGTGGAAAAAGCGTACCACAATTg > 2:858332/1‑140 (MQ=255) cTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGc < 1:2408302/128‑1 (MQ=255) cTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTg < 2:274159/140‑1 (MQ=255) cTGGATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTg < 1:1352258/140‑1 (MQ=255) ggATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGgt > 2:152565/1‑140 (MQ=255) ggATGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGgt < 2:1801391/140‑1 (MQ=255) tGCGCTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTa > 2:361061/1‑140 (MQ=255) cTTTCAGTTTTGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAATTACACTGGACTAAGCGTACCGCAATTGGTGTACTgg > 1:1037881/1‑140 (MQ=255) ttttGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGa < 1:2360890/140‑1 (MQ=255) ttttGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTGTTATCTCTTGTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGa < 2:368771/140‑1 (MQ=255) tGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTg > 1:1965226/1‑129 (MQ=255) tGAGGCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTg < 2:1965226/129‑1 (MQ=255) tGAGGCAAATGAAGTTTAAGTATCTTCTTTAAAATTAATCGCTAAAATTAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGacac < 2:1037881/140‑1 (MQ=255) | TTACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACAC > NC_000913/656985‑657254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |