| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 894,968 | A→G | intergenic (+72/‑23) | potF → / → potG | putrescine ABC transporter periplasmic binding protein/putrescine ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 894,968 | 0 | A | G | 99.0% | 348.0 / NA | 98 | intergenic (+72/‑23) | potF/potG | putrescine ABC transporter periplasmic binding protein/putrescine ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (56/41); minor base C (0/1); total (56/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGGATGATGT > NC_000913/894834‑895103 | cAGGATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCTCCGACAAGTCGCACCAATATGGTGCGCTTGCACGCATTc > 2:688455/1‑140 (MQ=255) ggATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCGGGCAATTCGCACCATTGTGGTGCGCTTGCACGCATTCaa > 2:1038092/1‑140 (MQ=255) cGACCGTGTGCGCCCCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCCCCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGagca < 1:2201623/140‑1 (MQ=255) cGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGagca < 1:2344007/140‑1 (MQ=255) aCCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCACTTACAGGCATTCCATGCCGGAGagcagc > 1:778832/1‑140 (MQ=255) gtgtGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGt > 1:516726/1‑140 (MQ=255) tgtgCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTAGGGTGCGCGTGCACGCAGTCAAAGCCGGAGAGCAGCCGTg > 2:659897/1‑140 (MQ=255) tgCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGaa > 1:2441805/1‑140 (MQ=255) gcgcACCCGCGGGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGaa < 1:1937176/139‑1 (MQ=255) gcgcACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGaa > 2:1937176/1‑139 (MQ=255) gcgcACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAAt > 2:441540/1‑140 (MQ=255) cgcACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCACACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATg > 1:1276086/1‑140 (MQ=255) aaaGGGAAGAGCGGAAATTACCGCGCAGTCGCAGATGCCCGAGGGGCGCACCACCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGc < 2:689466/140‑1 (MQ=255) aaGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCa > 1:333799/1‑140 (MQ=255) gAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCg < 1:441540/140‑1 (MQ=255) agagGGGAAAATAATCCGCAGTCGTAGAGGCCGGAGGGGCGCCCCACCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGaa < 2:189227/140‑1 (MQ=255) agagCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGaa > 2:616916/1‑140 (MQ=255) agagCGAAAAATAATCCGCAGTCGTAGATGCGGGGGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGaa < 2:1276086/140‑1 (MQ=255) agCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGaaaa > 2:1834096/1‑140 (MQ=255) cGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGc < 1:1237364/129‑1 (MQ=255) cGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGc > 2:1237364/1‑129 (MQ=255) cGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAAcc > 1:189227/1‑140 (MQ=255) gAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCg > 1:340378/1‑140 (MQ=255) aaaaTAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGt > 2:2477356/1‑140 (MQ=255) ataagCCGCAGCAGTAGGGGCCGGGGGGGCGCACCACACCCGCCGGCAATTCGCGCCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAg < 2:24692/140‑1 (MQ=255) aatCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATAACGCTATTCCTTGCGCGCAGGAGAAAACCCGTAAGgc > 1:653748/1‑140 (MQ=255) cAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAc > 2:266333/1‑140 (MQ=255) cAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAc > 2:2174920/1‑140 (MQ=255) cAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAc > 1:1603328/1‑140 (MQ=255) cAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAc > 2:2391336/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGTAGAGCAGCCGTGAATGACGCTAGCCCTCGCGCGCAGGCGAAAACCCGTAAGGCGCTGAcg > 1:1118197/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcg > 2:1282191/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcg > 1:2042511/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcg > 1:336195/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcg > 1:626484/1‑140 (MQ=255) aGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTAACCCTCGCCCGCTGGGGAAAACGCGTAAGGCGCTGAcg > 1:1048243/1‑140 (MQ=255) gTCGTAGATGCCGGAGGGGGGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgc < 1:1904859/140‑1 (MQ=255) tCGTAGATGCGGGAGGGGCGCACCCCCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgcc < 2:2312052/140‑1 (MQ=255) cGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgccg < 1:1307380/140‑1 (MQ=255) cGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgccg > 2:2476217/1‑140 (MQ=255) gaaGATGCCGGAGGGGCGCCCCACCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgccgc < 1:1850891/138‑1 (MQ=255) gTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgccgc < 2:336195/140‑1 (MQ=255) gTAGAGGCGGGGGGGGCGCCCCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAcgccgc < 2:1902245/140‑1 (MQ=255) tAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCGTCGGCCGAAGGCGAAAGCCCGTAAGGCGCTGACGCCGCt > 2:874011/1‑140 (MQ=255) gATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTAt > 1:2312052/1‑140 (MQ=255) tGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTa > 1:1560896/1‑140 (MQ=255) cgggAGGGGCGCACCACCCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGa < 2:2401394/138‑1 (MQ=255) cGGAGGGGCGCCCCAAACCCGCTGGTAATCCGCACCACTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGaa < 1:659897/140‑1 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATGCCTCGCCCCCAGGCGACAACCCGTAGGGCGGTGACGCCGCTATTAGaa > 2:777767/1‑140 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGaa > 1:1403766/1‑140 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGaa > 2:2245637/1‑140 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGaa > 1:90558/1‑140 (MQ=255) aGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATc > 2:1844094/1‑140 (MQ=255) gggCGCACCACCCCCGCCGGCAGTTCGCACCATTATGTTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCg < 1:874011/140‑1 (MQ=255) cgcACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAACGCGCTGACGCCGCTATTAGAAATCCGCaa > 1:1098197/1‑140 (MQ=255) cgcACCACACCCCCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGGGAATGACGCTATCCCTCGCCGGCAGGCGAAAACGCGTGAGGCGCTGACGCCGCTATTAGAAATCCGCaa > 2:669980/1‑140 (MQ=255) ctaccaccCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAAc < 2:60089/138‑1 (MQ=255) cgcccGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 2:1817570/138‑1 (MQ=255) cccccgcccgCAATTCCTACCAATATGGTGCCCGTGCACCCATTCAATGCCGTAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 2:1118197/138‑1 (MQ=255) cccccGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 1:1236554/138‑1 (MQ=255) cacCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 2:2053202/140‑1 (MQ=255) cacCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 2:90558/140‑1 (MQ=255) cacCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 2:1403766/140‑1 (MQ=255) cacCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 1:1636466/140‑1 (MQ=255) cacCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 1:2174920/140‑1 (MQ=255) cacCCGCCGGCAATTCGCACCACTATGGTTCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGAcc < 1:777767/140‑1 (MQ=255) acCCGCCGGCAATTCGTCCCATAATGGTGCGCTGGTACGTATTCAATGTCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCa < 2:1063483/140‑1 (MQ=255) acCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCa > 1:143373/1‑140 (MQ=255) ccgccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCg > 1:1952817/1‑127 (MQ=255) ccgccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCg < 2:1952817/127‑1 (MQ=255) ccgccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCaaa < 1:1282191/140‑1 (MQ=255) ccgccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCaaa > 1:1973925/1‑140 (MQ=255) ccgccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCaaa < 2:1560896/140‑1 (MQ=255) gccgGCAATTCGCACCATTATGGTGCGCTCGCACGCAATCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATc < 1:669980/140‑1 (MQ=255) ccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATcc > 2:586719/1‑140 (MQ=255) ccgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATcc > 1:1317178/1‑140 (MQ=255) cgGCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCt > 2:2473283/1‑140 (MQ=255) ggCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCTTAAGGCGCAGACACCGGTATTAGAACTCCGCAACCTGACCAAATCCTa > 2:818835/1‑140 (MQ=255) ggCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTa > 1:574856/1‑140 (MQ=255) ggCAATTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTa < 1:2245637/140‑1 (MQ=255) aaTTCGCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGa < 2:626484/140‑1 (MQ=255) gCACCATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTc < 2:516726/140‑1 (MQ=255) ccATTATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAAc < 2:333799/140‑1 (MQ=255) tATGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCGGCTATTAGGAATACGCGACCTGACCGAATCTTACGATGGTCAACATGc > 2:655740/1‑140 (MQ=255) tGGTGCGCTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCgg < 1:1844094/140‑1 (MQ=255) tGGTGCGCTTGCACGCAATCAAAGCCGGAGATCAGCCGTCAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCgg < 2:653748/140‑1 (MQ=255) gcgcTTGCACGCATTCACTGCCTGAGAGCAGTCGTGAATCACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGga < 2:661841/140‑1 (MQ=255) cgcTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCATCCTGACCAAATCCTTCGATGGGCAACATGCGGTGgat > 1:1129689/1‑140 (MQ=255) cgcTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgat > 2:2111667/1‑140 (MQ=255) cgcTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgat > 2:1937289/1‑140 (MQ=255) cgcTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgat > 2:1915895/1‑140 (MQ=255) cgcTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATACTACGATGGACAACATGCGGTGgat > 1:736193/1‑140 (MQ=255) cTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgatga > 1:2361273/1‑140 (MQ=255) cTTGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgatga > 2:2217319/1‑140 (MQ=255) ttGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATg > 1:1804788/1‑129 (MQ=255) ttGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATg < 2:1804788/129‑1 (MQ=255) ttGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGgatgat > 1:2099642/1‑140 (MQ=255) tGCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGGatgatg < 2:1603328/140‑1 (MQ=255) gCACGCATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGTCCAAATCGTACGATTGTCAACATGCGGTGGATGATGt > 1:762779/1‑140 (MQ=255) | CAGGATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGGATGATGT > NC_000913/894834‑895103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |