| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,057,881 | T→C | E25G (GAG→GGG) | torR ← | DNA‑binding transcriptional dual regulator TorR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,057,881 | 0 | T | C | 98.7% | 510.1 / ‑1.2 | 148 | coding (74/693 nt) | torR | DNA‑binding transcriptional dual regulator TorR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (69/77); minor base . (1/1); total (70/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.53e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
TCTCGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCTCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGTTCATCCTGA > NC_000913/1057746‑1058016 | tctcGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTg > 2:1366705/1‑140 (MQ=255)tctcGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTg > 1:1304269/1‑140 (MQ=255)tctcGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTACCGTAGCCCAGCACCGATCGCCGTATCGGAAACGGTATACCCCCCCTg > 2:835138/1‑140 (MQ=255) ctcGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGa > 1:1546975/1‑140 (MQ=255) tcGCAGGGCGCGGGTTAGCATCGGGCCATTTTCATCGGGTAAGTTGATGTCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAg < 2:881847/140‑1 (MQ=255) tcGCAGGGCGCGGGTTAACATCTGGCCATTTCCATGGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAg < 2:964125/140‑1 (MQ=255) aCATCAGGCCATTTTCATCGGGTAATTTGCTATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAAt < 1:1088945/140‑1 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCGCCCCTGAGCGAAGGAGGATTGTAATCGCGcc > 2:1031468/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCTCTGAGTGAAGTAGGATTGTAATCGCGcc > 1:2223155/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAAt > 1:1384824/1‑134 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATcgcg > 2:253625/1‑138 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATcgcg < 1:253625/138‑1 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 2:1897333/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 2:1764273/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 2:158395/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 1:1800628/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 1:76706/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc > 1:1920939/1‑140 (MQ=255) ggCCATTTTCATCGGGTAAGTTAATTTCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGcc < 1:963078/140‑1 (MQ=255) gCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCt < 2:1920939/140‑1 (MQ=255) ttttCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGt > 1:2044068/1‑140 (MQ=255) ttttCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGt > 2:1482785/1‑140 (MQ=255) tttCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCATCAGTGAAGTAGGATAGTAATCGCTCCTGGGTa > 2:1171458/1‑140 (MQ=255) ttCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTaa < 1:1967567/140‑1 (MQ=255) cGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGc < 1:1897333/140‑1 (MQ=255) aGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCt < 1:249367/140‑1 (MQ=255) aGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCt > 1:50119/1‑140 (MQ=255) aGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCt < 1:383037/140‑1 (MQ=255) ttGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTc < 1:1733330/140‑1 (MQ=255) gATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTcaa < 2:51435/140‑1 (MQ=255) gATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTcaa < 1:2149925/140‑1 (MQ=255) atCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTcaacaa < 1:1440848/140‑1 (MQ=255) atCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTcaacaa > 1:2047332/1‑140 (MQ=255) atCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTcaacaa > 1:607959/1‑140 (MQ=255) ccAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaata < 1:1813504/140‑1 (MQ=255) ccAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaata < 2:1969087/140‑1 (MQ=255) agcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataac < 2:1885553/140‑1 (MQ=255) agcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataac > 2:2313424/1‑140 (MQ=255) gcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataaca > 1:242356/1‑140 (MQ=255) gcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataaca > 2:1824693/1‑140 (MQ=255) gcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataaca > 2:2007490/1‑140 (MQ=255) gcagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataaca > 1:1309971/1‑140 (MQ=255) cagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaata < 1:1486256/136‑1 (MQ=255) cagAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaata > 2:1486256/1‑136 (MQ=255) agAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCaacaataacaat < 2:1304269/140‑1 (MQ=255) ttAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCt < 2:388805/122‑1 (MQ=255) ttAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAatgtga < 2:2174591/140‑1 (MQ=255) aTCTACCGACTGATTATGCATAATTACCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAatgtgatgtg < 1:1031468/140‑1 (MQ=255) tCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTgg < 1:2007490/140‑1 (MQ=255) tACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCa < 2:2113094/140‑1 (MQ=255) aCCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAatgtga > 1:1900608/1‑132 (MQ=255) aCCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCAt > 1:2210342/1‑140 (MQ=255) aCCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCAt > 2:193694/1‑140 (MQ=255) ccGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCAACTTAAACAATAACAATGTGATGTGGCATc > 1:1217961/1‑140 (MQ=255) gACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCag < 2:76706/140‑1 (MQ=255) gATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAggg < 2:1778606/140‑1 (MQ=255) aTTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt < 2:2483382/140‑1 (MQ=255) aTTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt < 2:2210342/140‑1 (MQ=255) aTTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt < 1:158395/140‑1 (MQ=255) cATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt > 1:1618146/1‑134 (MQ=255) cATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt < 2:1618146/134‑1 (MQ=255) tAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTACAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCa < 1:528652/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt < 2:566771/130‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGt > 1:566771/1‑130 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt > 1:612703/1‑140 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 1:1764273/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 2:242356/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 2:621061/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 1:2287974/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 1:2313424/140‑1 (MQ=255) aTTTCCCGTAGCCCAGCACCGCCCGTCGTCACGGAAAGGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 1:835138/140‑1 (MQ=255) aTTTCCCGAAGCCCAGTGCCGCTCGCCGTAACGAACACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCAtt < 2:1189514/140‑1 (MQ=255) tttCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtc > 1:510768/1‑140 (MQ=255) cccGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCaga < 2:2246224/122‑1 (MQ=255) cccGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTa > 2:2166752/1‑130 (MQ=255) cccGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTa < 1:2166752/130‑1 (MQ=255) aGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcata < 2:2525/140‑1 (MQ=255) cccAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc > 2:529182/1‑140 (MQ=255) cccAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc < 2:2047332/140‑1 (MQ=255) cccAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc < 1:529182/140‑1 (MQ=255) cccAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgtt < 2:2307610/134‑1 (MQ=255) cccAGCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAACGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc < 2:607959/140‑1 (MQ=255) cccAGCACCACTCGCCGTAACGGAAACGGTATTCCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatt < 2:76234/140‑2 (MQ=255) gCACCGCTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatctgtt < 2:1374653/140‑1 (MQ=255) cTCGCCGTAACGGAATCGGTATGCCCCCCCTGAGTGACGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATAtt < 1:803341/140‑1 (MQ=255) cTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCTGAGGGTTTTACGCAGTCTGTTGATATCTGTTCATAtt > 1:652394/1‑140 (MQ=255) cTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCCGAGGGTTGTACGCAGTCTGTTAATATCTGTTCATAtt > 1:725915/1‑140 (MQ=255) cTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttca < 2:1837472/126‑1 (MQ=255) cTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATAtt > 1:294918/1‑140 (MQ=255) cTCGCCGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATAtt > 2:1990696/1‑140 (MQ=255) cGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc < 1:542092/125‑1 (MQ=255) cGTAACGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATtctgttcatatc > 2:542092/1‑125 (MQ=255) tAACGGAAACGGTATACCC‑‑CCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTaa < 2:2039604/140‑1 (MQ=255) aaCGGAAACGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTa > 1:1010706/1‑140 (MQ=255) aaCGGTATACCCCCCCTGAGTGTAGTAGGCTTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGt < 1:743168/140‑1 (MQ=255) aaCGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGt < 2:294918/140‑1 (MQ=255) aaCGGTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGt < 2:1010706/140‑1 (MQ=255) ggTATACCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGTTCa > 1:199944/1‑140 (MQ=255) aCCCCCCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGTTCATCCTg < 2:1309971/140‑1 (MQ=255) ccccccCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGTTCATCCTGa > 1:2258798/1‑140 (MQ=255) | TCTCGCAGGGCGCGGGTTAACATCAGGCCATTTTCATCGGGTAAGTTGATATCCAGCAGAATTAAATCTACCGACTGATTCTGCATAATTTCCCGTAGCCCAGCACCGCTCGCCGTAACGGAAACGGTATACCCCTCCTGAGTGAAGTAGGATTGTAATCGCGCCTGGGTAACCGGCTCATCTTCAACAATAACAATGTGATGTGGCATCAGAGGGTTTTACTCATTCTGTTCATATCTGTTCATATTCTGCCGTAAGCCGTTCATCCTGA > NC_000913/1057746‑1058016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |