BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,107,290	A→G	L312L (CTA→CTG)	clsC →	cardiolipin synthase C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,107,290	0	A	G	99.3%	521.5 / NA	146	L312L (CTA→CTG)	clsC	cardiolipin synthase C
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (78/67); minor base C (0/1); total (78/68)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 146 total aligned reads displayed.

TACCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTAACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTACAC  >  NC_000913/1107154‑1107422

tACCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGAcc                                                                                                                                   <  2:539264/140‑1 (MQ=255)

 aCCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCa                                                                                                                                  <  1:29182/140‑1 (MQ=255)

       gcgcCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATtctc                                                                                                                            >  1:1836178/1‑140 (MQ=255)

       gcgcCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGAAAAGATTGCGATCCTGACCAATtctc                                                                                                                            >  2:457508/1‑140 (MQ=255)

        cgcCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTctct                                                                                                                           <  1:1936911/140‑1 (MQ=255)

               tCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCt                                                                                                                    <  1:89568/140‑1 (MQ=255)

               tCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCt                                                                                                                    <  2:2495459/140‑1 (MQ=255)

                      taTGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTGCCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATg                                                                                                             <  2:352785/139‑1 (MQ=255)

                          ggCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGc                                                                                                         >  1:1359203/1‑140 (MQ=255)

                          ggCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGc                                                                                                         >  1:1227967/1‑140 (MQ=255)

                          ggCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGc                                                                                                         >  2:1845237/1‑140 (MQ=255)

                            cTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTg                                                                                                       <  2:1457716/140‑1 (MQ=255)

                            cTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAAGTCCCTTGCCCCTAACGATGTTGCTg                                                                                                       >  1:949120/1‑140 (MQ=255)

                             tCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTgt                                                                                                      >  1:1860083/1‑140 (MQ=255)

                              cACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTgtc                                                                                                     >  1:1224194/1‑140 (MQ=255)

                               aCCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTgtcg                                                                                                    >  2:1598462/1‑140 (MQ=255)

                               aCCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGCAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTgtcg                                                                                                    >  2:13562/1‑140 (MQ=255)

                                 ccAGTGAACGCATCGCTATTATCTCCTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTgtcgtc                                                                                                  <  1:684660/140‑1 (MQ=255)

                                     tGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATg                                                                                              >  2:1879/1‑140 (MQ=255)

                                      gAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGc                                                                                             >  2:1882304/1‑140 (MQ=255)

                                         cGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCgg                                                                                          >  2:1304443/1‑140 (MQ=255)

                                         cGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATCCTCTTGCAGCTAACGATGTTGATGTCGTCCATGCCgg                                                                                          >  1:775344/1‑140 (MQ=255)

                                           cATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGAt                                                                                        >  2:90863/1‑140 (MQ=255)

                                           cATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATCCTCCTGCTGCTAACGAGGTTGCTGTCGTCCATGCCGGAt                                                                                        >  2:633919/1‑140 (MQ=255)

                                                    tatCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCt                                                                               <  2:1226643/140‑1 (MQ=255)

                                                        tctTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGgcg                                                                           >  2:353264/1‑140 (MQ=255)

                                                          ttCCTATTTTGTACCGAAACGCCCAGGTGTGTCGCCACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCa                                                                         <  2:874265/140‑1 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:1497638/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:2105974/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  1:1636694/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:2380774/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:2388586/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:2476647/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaa                                                                        >  1:1317338/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCAATGCCGGATACGCGCGCTGGCGCaa                                                                        >  2:248837/1‑140 (MQ=255)

                                                           tCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCAATCCCGGATTCGCGCGCTGGCGCaa                                                                        >  1:1122894/1‑140 (MQ=255)

                                                            ccTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCaaa                                                                       >  2:446874/1‑140 (MQ=255)

                                                                  ttGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTg                                                                 >  2:2143251/1‑140 (MQ=255)

                                                                  ttGTACCGACACGCGCAGGTGTCGCGCAACTTTTATGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTg                                                                 <  2:1122894/140‑1 (MQ=255)

                                                                   tGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGc                                                                >  2:78568/1‑140 (MQ=255)

                                                                    gTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCt                                                               >  2:1945184/1‑140 (MQ=255)

                                                                    gTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCt                                                               <  2:1671531/140‑1 (MQ=255)

                                                                    gTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCt                                                               <  1:345555/140‑1 (MQ=255)

                                                                    gTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCt                                                               <  1:2476647/140‑1 (MQ=255)

                                                                    gTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCt                                                               <  2:304186/140‑1 (MQ=255)

                                                                     tACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTc                                                              >  2:2159428/1‑140 (MQ=255)

                                                                      aCCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTcc                                                             >  1:2059746/1‑140 (MQ=255)

                                                                          acacGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTa                                                         >  2:1970718/1‑140 (MQ=255)

                                                                           cacGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTAt                                                        >  2:1552358/1‑140 (MQ=255)

                                                                            acGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATg                                                       <  1:1497638/140‑1 (MQ=255)

                                                                              gcgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGc                                                     <  1:1505091/140‑1 (MQ=255)

                                                                              gcgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGc                                                     <  2:1769585/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTATGGGTGGTGAGAAAACGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  1:890536/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  1:2388586/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  2:324922/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  2:1224194/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  1:2418662/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  1:353264/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  1:596729/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACGCTTACGGATGGTGAGAATAGGTGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  2:949120/140‑1 (MQ=255)

                                                                               cgcAGGTGTGGCGCAACCCTTACGGATGGTGAGAACAGGAGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCg                                                    <  2:775344/140‑1 (MQ=255)

                                                                                   ggTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGa                                                <  2:1636694/140‑1 (MQ=255)

                                                                                    gtgtGGCGCAACTCTTACGGATAGTGAGAGAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGaa                                               <  1:912428/140‑1 (MQ=255)

                                                                                     tgtgGCGCAACTCTTACTGATGCTGAGAAAAGGGGTAAAGATTGCGATACTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAAt                                              <  2:1124957/140‑1 (MQ=255)

                                                                                     tgtgGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAAt                                              <  2:10489/140‑1 (MQ=255)

                                                                                     tgtgGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAAt                                              <  1:1845237/140‑1 (MQ=255)

                                                                                     tgtgGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAAt                                              <  1:191325/140‑1 (MQ=255)

                                                                                        ggCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGTTGGCGCAAAAAATTGCTCCGCAATGGCGTGGAATtat                                           >  1:844884/1‑140 (MQ=255)

                                                                                        ggCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATtat                                           >  2:2342517/1‑140 (MQ=255)

                                                                                         gcgcAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGTCGCTAACGATGTTGCTGTCATCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATtata                                          >  2:327115/1‑140 (MQ=255)

                                                                                          cgcAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTatat                                         <  2:2412709/140‑1 (MQ=255)

                                                                                            cAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGa                                       >  1:1084846/1‑140 (MQ=255)

                                                                                              aCTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCAATCCTGACCAATTCTCTTGCTGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAAc                                     >  2:211941/1‑140 (MQ=255)

                                                                                                       gATGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGa                            <  1:2233101/140‑1 (MQ=255)

                                                                                                         tGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGAcg                          >  2:560041/1‑140 (MQ=255)

                                                                                                         tGGTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGAAAAAAATTGCTCTGCTGTGGCGTGGCATTAAATGAACTCAAGCCGAcg                          >  2:758935/1‑140 (MQ=255)

                                                                                                          ggTGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGAcgc                         <  1:2490479/140‑1 (MQ=255)

                                                                                                            tGAGAAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGt                       >  2:1767451/1‑140 (MQ=255)

                                                                                                             gagaAAAGGGGTAAAGATTGCAATCCTGACCAATTCTCTTGCTGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTg                      <  1:211941/140‑1 (MQ=255)

                                                                                                              agaAAAGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGTAGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAGATTGCTCCGCTAAGGCCTGGAATTAAATGAACTCAAGCCGACGCGTGa                     >  2:1041415/1‑140 (MQ=255)

                                                                                                              agaAAAGGGGTAAAGATCGTGATCCTGACCACTTCCCTTCCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGa                     <  2:668195/140‑1 (MQ=255)

                                                                                                               gaAAAGGGGTAAAGACTGCGATGCTCACCCATTCTCTGGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGaa                    <  1:768584/140‑1 (MQ=255)

                                                                                                                 aaaGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACa                  <  1:2020984/140‑1 (MQ=255)

                                                                                                                 aaaGGGGTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACa                  <  1:1720952/140‑1 (MQ=255)

                                                                                                                     gggTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGTGTGAAATTATATGAACACAAGACGACGCGTGAACAAagt              >  2:735994/1‑140 (MQ=255)

                                                                                                                      ggTAAAGATTGTGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATGTGAGCTGAAGCCGACGCGTGAACAAagta             >  1:668195/1‑140 (MQ=255)

                                                                                                                      ggTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagta             <  1:112099/140‑1 (MQ=255)

                                                                                                                      ggTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagta             >  2:2236654/1‑140 (MQ=255)

                                                                                                                       gTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagtag            <  2:1359203/140‑1 (MQ=255)

                                                                                                                       gTAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagtag            <  1:2236654/140‑1 (MQ=255)

                                                                                                                        tAAAGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagtagt           >  2:882841/1‑140 (MQ=255)

                                                                                                                         aaaGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAgtagta          <  1:78568/140‑1 (MQ=255)

                                                                                                                          aaGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTAc         <  1:457508/140‑1 (MQ=255)

                                                                                                                          aaGATTGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTAc         <  1:1888754/140‑1 (MQ=255)

                                                                                                                               tGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagt              <  2:505089/130‑1 (MQ=255)

                                                                                                                               tGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAagt              >  1:505089/1‑130 (MQ=255)

                                                                                                                               tGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAgtagta          >  1:212353/1‑134 (MQ=255)

                                                                                                                               tGCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTac    >  1:1889465/1‑140 (MQ=255)

                                                                                                                                gCGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGGCGTGTGAACTAAGTAGTACGTTaca   >  1:739011/1‑140 (MQ=255)

                                                                                                                                 cGATCCTGACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTacac  <  1:446874/140‑1 (MQ=255)

TACCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTAACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTACAC  >  NC_000913/1107154‑1107422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`