| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,215,964 | A→G | H59R (CAC→CGC) | ycgZ → | putative two‑component system connector protein YcgZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,215,964 | 0 | A | G | 99.5% | 656.0 / NA | 183 | H59R (CAC→CGC) | ycgZ | putative two‑component system connector protein YcgZ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (52/130); minor base C (0/1); total (52/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
ATCACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACACGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAA > NC_000913/1215828‑1216095 | aTCACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACgcgc > 2:2188521/1‑140 (MQ=255) cACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGa < 2:462921/140‑1 (MQ=255) aCTCGTTACTTTGCAAAAGCTACCTTGCATAGTTATCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGAc < 2:1083857/140‑1 (MQ=255) cTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACt < 2:2049494/140‑1 (MQ=255) tACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGa < 2:362122/133‑1 (MQ=255) tACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGa > 1:1424619/1‑140 (MQ=255) cTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAag > 2:2231673/1‑140 (MQ=255) tttGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAaga < 1:2400336/140‑1 (MQ=255) tGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAgg > 2:1676779/1‑140 (MQ=255) gCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGa < 1:280476/140‑1 (MQ=255) gCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGa > 2:1618095/1‑140 (MQ=255) gCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGa > 2:150089/1‑140 (MQ=255) aaaaGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAAc < 2:2379576/140‑1 (MQ=255) aaaaGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAAc < 2:1235332/140‑1 (MQ=255) aaaaGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAAc < 2:2165950/140‑1 (MQ=255) aaGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAGCTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAg < 2:172065/140‑1 (MQ=255) aaGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAg < 2:2312899/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTTCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 1:221735/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 2:1772887/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 2:2129281/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 1:264228/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 1:2291160/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 2:1535309/140‑1 (MQ=255) aGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCCGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 2:1647057/140‑1 (MQ=255) gCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTGGCCGACTGGAACGCGCGACTGAGGAAGAGGAACAGaa > 1:829924/1‑140 (MQ=255) cTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGaaa < 1:1676779/140‑1 (MQ=255) cTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGaaa < 1:1380958/140‑1 (MQ=255) aaCTTGCATACTCAGCAGGAAACTCTCGGTGAAATTGAGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACa < 1:1008394/140‑1 (MQ=255) aaCTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACa < 2:189676/140‑1 (MQ=255) aaCTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACa < 2:1515615/140‑1 (MQ=255) gCATACTCAGCAGGAAACTCTCTGGTAAATTGTGACTAAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATtata < 1:1127082/140‑1 (MQ=255) gCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATtata < 1:1877951/140‑1 (MQ=255) gCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATtata < 1:1798743/140‑1 (MQ=255) aTACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAAt > 2:2445932/1‑140 (MQ=255) tACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATg < 2:388141/140‑1 (MQ=255) tACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTAGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATg > 1:1548212/1‑140 (MQ=255) tACTCAGCAGGAAACTCCCGGGAAAATTGTATCCGCGATCTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATg < 2:1154380/140‑1 (MQ=255) tCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATtata < 1:1919377/134‑1 (MQ=255) agcagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAg < 1:1993053/122‑1 (MQ=255) agcagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGa < 1:457659/123‑1 (MQ=255) agcagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTa > 2:466029/1‑140 (MQ=255) agcagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTa > 1:1600985/1‑140 (MQ=255) gcagGAAACTCTCGGGCTAATTGTGACTGAGTTGTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTaa < 2:1073297/140‑1 (MQ=255) cagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAAt > 2:2456224/1‑140 (MQ=255) cagGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAAt > 2:935885/1‑140 (MQ=255) gAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTgg > 1:1370327/1‑140 (MQ=255) gAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTgg > 1:1998563/1‑140 (MQ=255) aaCTCTCGGGGAAATTGGGACTGAGATTTTGAAAGTTGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGt < 2:894222/140‑1 (MQ=255) aaCTCTCGGGGAAATCGTGACTCAGTTTTCGAAAGATCGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGt < 1:716315/140‑1 (MQ=255) aCTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGtt < 2:2110483/140‑1 (MQ=255) aCTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGtt < 2:1463460/140‑1 (MQ=255) aCTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTAGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGtt < 2:1548212/140‑1 (MQ=255) aCTCTCGGGGAAATTCTGACTGGGATTTTCAAAGATGCACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGtt < 1:785380/140‑1 (MQ=255) tctcGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGtt < 2:1368537/138‑1 (MQ=255) tctcGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCACGACTGGGAAAGAGGAGAAGAAACATTATAAAG‑‑CACTAAGTGGGTTGc > 2:1217750/1‑140 (MQ=255) cGGAGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCttt < 1:2321309/140‑1 (MQ=255) aaaTTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaa < 1:935885/140‑1 (MQ=255) aaaTTGTGACTGAGACTTTGAACGAAGGAAGTAATCTCAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaa < 1:1183605/140‑1 (MQ=255) aTTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaata > 1:2234044/1‑140 (MQ=255) aTTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaata < 2:1600985/140‑1 (MQ=255) gACTGAGATTTTGAAAGCTGGACGTAATCTGCGTCTAAATTCGCTTTGCGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCa < 2:829924/140‑1 (MQ=255) aCTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCttt < 2:628129/127‑1 (MQ=255) aCTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCaa > 2:2348891/1‑140 (MQ=255) aCTGAGATTTTGAAAGACGGACTTAATCTGAGTCGTAAGGCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCaa < 2:1016395/140‑1 (MQ=255) agaTTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaata < 2:2262137/130‑1 (MQ=255) agaTTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGaata > 1:2262137/1‑130 (MQ=255) aTTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCt < 1:2456224/140‑1 (MQ=255) aTGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTaa < 1:1609931/140‑1 (MQ=255) aTGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTaa < 2:305773/140‑1 (MQ=255) aTGGACGTAATCTGACTCGAAACTCGCTTAGTGCCAATCTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTaa < 1:1144396/140‑1 (MQ=255) cGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGt < 2:261654/140‑1 (MQ=255) cGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGt < 2:1998563/140‑1 (MQ=255) gAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGGCTGATTATTTAACAGGTTAGCTATg > 1:1014215/1‑140 (MQ=255) gAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTaa > 1:2431134/1‑127 (MQ=255) aGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGTACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGa > 1:1330178/1‑140 (MQ=255) gTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGaa > 2:297782/1‑140 (MQ=255) tCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAg < 2:111607/140‑1 (MQ=255) tCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAg < 2:1289916/140‑1 (MQ=255) cGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGt < 1:1343708/140‑1 (MQ=255) gAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTc < 1:2215139/140‑1 (MQ=255) aaGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATGCACACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTc < 1:1618095/140‑1 (MQ=255) cGCTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCTTCATAATTTAACAGGTTAGCTATGAAGTCGTTATg > 2:1169748/1‑140 (MQ=255) cTTTGTGCCAAACTTCTTTGCCGACTGGACCGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGaa < 1:889964/140‑1 (MQ=255) cTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGaa < 1:2181930/140‑1 (MQ=255) cTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGaa < 2:1404262/140‑1 (MQ=255) cTTTGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGaa < 1:326938/140‑1 (MQ=255) tttGTGCCAAACTTCATTGCCGACTAGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAg < 1:1050327/140‑1 (MQ=255) ttGTGCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGa < 1:30142/140‑1 (MQ=255) tgtgCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc < 2:2440860/140‑1 (MQ=255) tgtgCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc < 1:2078355/140‑1 (MQ=255) tgtgCCAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc < 1:1275197/140‑1 (MQ=255) tgtgCCAAACTTCTTCGCCGACCGGCACGCGCGACTGTGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc < 1:646721/140‑1 (MQ=255) ccAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCt > 1:1330762/1‑140 (MQ=255) cAAACTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTg < 1:2348891/140‑1 (MQ=255) aCTTCTTTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCATGATTATTGAACAGGTTAGCTATGAGGTCGATATGAAGACATCTGATa > 2:646721/1‑140 (MQ=255) tcttTGCCGACTGGACCGCGCGCCTCGGGCAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATg < 1:732534/140‑1 (MQ=255) tcttTGCCGACTGGAACCCGCGACTGGGGAACAGGAACACAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATg < 2:680218/140‑1 (MQ=255) cttTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc > 1:1939488/1‑128 (MQ=255) cttTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGAc < 2:1939488/128‑1 (MQ=255) cttTGCCGACTGGAACGCGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGa < 1:1507245/140‑1 (MQ=255) | ATCACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACACGCGACTGGGGAAGAGGAACAGAAACATTATAATG‑‑CACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAA > NC_000913/1215828‑1216095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |