BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,502,018	(A)_6→5	intergenic (+429/+85)	yjgZ → / ← insG	KpLE2 phage‑like element; uncharacterized protein YjgZ/KpLE2 phage‑like element; IS4 putative transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,502,013	0	A	.	100.0%	468.3 / NA	111	intergenic (+424/+90)	yjgZ/insG	KpLE2 phage‑like element; uncharacterized protein YjgZ/KpLE2 phage‑like element; IS4 putative transposase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (56/55); total (56/55)

Only 100 of 128 total aligned reads displayed.

CTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACAAAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAT  >  NC_000913/4501878‑4502142

cTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaa                                                                                                                               <  2:608724/140‑1 (MQ=255)

 ttACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGTGCATGACAATGTCAAACAGTCAAAGATCGTGGCGCTGACGGTCAGTCTTGGGGACaaaaag                                                                                                                              <  2:1486479/140‑2 (MQ=255)

 ttACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaag                                                                                                                              <  2:1198679/140‑2 (MQ=255)

  tACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagc                                                                                                                             <  1:800076/140‑3 (MQ=255)

  tACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagc                                                                                                                             >  1:738144/1‑138 (MQ=255)

  tACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGAACCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagc                                                                                                                             >  1:116650/1‑138 (MQ=255)

   aCCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagct                                                                                                                            <  2:1609694/140‑4 (MQ=255)

   aCCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagct                                                                                                                            >  1:1435735/1‑137 (MQ=255)

   aCCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagct                                                                                                                            <  2:574143/140‑4 (MQ=255)

   aCCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagct                                                                                                                            >  1:1324295/1‑137 (MQ=255)

    ccAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaagctc                                                                                                                           <  2:72112/140‑5 (MQ=255)

        ttAAGGGACATAGCCAGATACGCAACTGGCTGATGCAATCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTa                                                                                                                      >  2:1048071/1‑140 (MQ=255)

        ttAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTa                                                                                                                      <  2:19775/140‑1 (MQ=255)

         tAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaag                                                                                                                              <  2:825241/132‑2 (MQ=255)

         tAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACaaaaag                                                                                                                              >  1:825241/1‑131 (MQ=255)

         tAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTAt                                                                                                                     >  2:480296/1‑140 (MQ=255)

            gggACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATtct                                                                                                                  >  1:530846/1‑140 (MQ=255)

               aCATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGt                                                                                                               >  2:1368135/1‑140 (MQ=255)

                cATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGtt                                                                                                              >  1:628033/1‑140 (MQ=255)

                cATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGtt                                                                                                              <  1:480296/140‑1 (MQ=255)

                cATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGtt                                                                                                              >  2:82808/1‑140 (MQ=255)

                  tAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACTGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTgg                                                                                                            >  1:1329792/1‑140 (MQ=255)

                  tAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTgg                                                                                                            >  1:197549/1‑140 (MQ=255)

                   aGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGc                                                                                                           >  1:1542516/1‑140 (MQ=255)

                   aGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGc                                                                                                           >  1:350571/1‑140 (MQ=255)

                   aGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGc                                                                                                           <  2:350571/140‑1 (MQ=255)

                    gCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCa                                                                                                          >  1:124319/1‑140 (MQ=255)

                      cAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAAc                                                                                                        <  2:776489/140‑1 (MQ=255)

                        gATACGCAACTGGCTGATGCAATCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCa                                                                                                      <  1:1048071/140‑1 (MQ=255)

                        gATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTa                                                                                                                      >  2:124525/1‑124 (MQ=255)

                        gATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCa                                                                                                      <  2:1435735/140‑1 (MQ=255)

                        gATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCa                                                                                                      <  2:628033/140‑1 (MQ=255)

                           aCGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGAt                                                                                                   <  1:1639120/140‑1 (MQ=255)

                           aCGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGAt                                                                                                   >  1:1224116/1‑140 (MQ=255)

                            cGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATa                                                                                                  >  2:424282/1‑140 (MQ=255)

                              cAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAAt                                                                                                >  1:1426646/1‑140 (MQ=255)

                               aaCTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCa                                                                                                      >  1:1323578/1‑133 (MQ=255)

                                  tGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTaa                                                                                            <  1:82808/140‑1 (MQ=255)

                                   ggCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAAc                                                                                           >  2:1241206/1‑140 (MQ=255)

                                   ggCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAAc                                                                                           <  1:1127283/140‑1 (MQ=255)

                                    gCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACa                                                                                          >  2:1100610/1‑140 (MQ=255)

                                    gCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACa                                                                                          >  2:1306535/1‑140 (MQ=255)

                                    gCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCCCAGTATTCTCGTTGGCAACCAGATAATTTAACa                                                                                          >  2:1090449/1‑140 (MQ=255)

                                           cAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGa                                                                                                    <  1:1532915/123‑1 (MQ=255)

                                           cAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGa                                                                                                    >  2:1532915/1‑123 (MQ=255)

                                           cAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATg                                                                                   >  2:975886/1‑140 (MQ=255)

                                           cAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATg                                                                                   <  1:1241206/140‑1 (MQ=255)

                                            aaGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACTGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGc                                                                                  <  2:1329792/140‑1 (MQ=255)

                                                 gTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGaaa                                                                             <  2:155348/140‑1 (MQ=255)

                                                  tCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAAc                                                                            >  1:812797/1‑140 (MQ=255)

                                                      aTGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGaaa                                                                        <  2:258394/140‑1 (MQ=255)

                                                      aTGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGaaa                                                                        <  1:1242943/140‑1 (MQ=255)

                                                       tGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAAt                                                                       <  2:897106/140‑1 (MQ=255)

                                                       tGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAAt                                                                       <  2:1542516/140‑1 (MQ=255)

                                                        gTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATa                                                                      <  2:973848/140‑1 (MQ=255)

                                                               gATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCt                                                               <  2:1274138/140‑1 (MQ=255)

                                                               gATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCt                                                               <  1:1100610/140‑1 (MQ=255)

                                                               gATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCCCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCt                                                               <  1:1090449/140‑1 (MQ=255)

                                                                aTCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCtt                                                              >  1:1505739/1‑140 (MQ=255)

                                                                aTCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTCTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCtt                                                              >  1:352061/1‑140 (MQ=255)

                                                                  ccGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTgg                                                            <  1:1306535/140‑1 (MQ=255)

                                                                  ccGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGCGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTgg                                                            <  2:1324295/140‑1 (MQ=255)

                                                                     cTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGaa                                                                         >  1:1526072/1‑124 (MQ=255)

                                                                     cTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTc                                                         >  1:900252/1‑140 (MQ=255)

                                                                             cGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCt                                                               <  2:462033/126‑1 (MQ=255)

                                                                             cGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCt                                                               >  1:462033/1‑126 (MQ=255)

                                                                             cGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGc                                                 >  2:151452/1‑140 (MQ=255)

                                                                                gCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCcag                                              <  1:962833/140‑1 (MQ=255)

                                                                                 cATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCcagt                                             <  2:812797/140‑1 (MQ=255)

                                                                                  aTGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGTAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCcagtc                                            >  1:1487951/1‑140 (MQ=255)

                                                                                  aTGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCcagtc                                            >  1:749942/1‑140 (MQ=255)

                                                                                  aTGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCca                                               >  2:1644422/1‑137 (MQ=255)

                                                                                  aTGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCca                                               <  1:1644422/137‑1 (MQ=255)

                                                                                    gACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCcagtcag                                          <  2:807673/140‑1 (MQ=255)

                                                                                       aaTGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTa                                       <  2:197549/140‑1 (MQ=255)

                                                                                         tGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCca                                               >  2:117051/1‑130 (MQ=255)

                                                                                         tGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCca                                               <  1:117051/130‑1 (MQ=255)

                                                                                         tGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAg                                     >  1:1408145/1‑140 (MQ=255)

                                                                                          gTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGc                                    >  2:317239/1‑140 (MQ=255)

                                                                                          gTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGc                                    <  2:1408145/140‑1 (MQ=255)

                                                                                            cAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCaa                                  <  1:1400061/140‑1 (MQ=255)

                                                                                              aaCAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAact                                <  2:530846/140‑1 (MQ=255)

                                                                                              aaCAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAact                                >  2:590140/1‑140 (MQ=255)

                                                                                              aaCAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAact                                >  2:737725/1‑140 (MQ=255)

                                                                                                   tCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAactgactg                           >  2:269564/1‑140 (MQ=255)

                                                                                                    cAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTgg                          >  2:885535/1‑140 (MQ=255)

                                                                                                       aGATTGTGGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGctc                       <  1:269564/140‑1 (MQ=255)

                                                                                                           tgtgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCtttt                   >  1:819717/1‑140 (MQ=255)

                                                                                                           tgtgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCtttt                   >  2:595698/1‑140 (MQ=255)

                                                                                                             tgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCaa                                  >  2:984256/1‑123 (MQ=255)

                                                                                                             tgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCaa                                  <  1:984256/123‑1 (MQ=255)

                                                                                                             tgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTc                 >  1:669458/1‑140 (MQ=255)

                                                                                                             tgGCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTc                 >  1:205078/1‑140 (MQ=255)

                                                                                                              ggCGTTGACGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCg                <  1:1213658/140‑1 (MQ=255)

                                                                                                                     aCGGTCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCtgt         <  1:608553/140‑1 (MQ=255)

                                                                                                                         tCAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTgggg     >  2:1039591/1‑140 (MQ=255)

                                                                                                                          cAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGt    <  1:363057/140‑1 (MQ=255)

                                                                                                                          cAGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGt    <  1:1370770/140‑1 (MQ=255)

                                                                                                                           aGTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTa   <  2:1224116/140‑1 (MQ=255)

                                                                                                                            gTCTTGGGGAC‑AAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAt  >  1:654210/1‑140 (MQ=255)

CTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACAAAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAT  >  NC_000913/4501878‑4502142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`