Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,316,212 +C coding (1315/1488 nt) nusA ← transcription termination/antitermination protein NusA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,316,2081.C100.0% 338.3 / NA 93V440G (GTA→GGA) nusAtranscription termination/antitermination protein NusA
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (44/49);  total (44/49)

Only 100 of 104 total aligned reads displayed.

CGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑CCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCTCATCAAGGCCTT  >  NC_000913/3316070‑3316340
                                                                                                                                           |                                                                                                                                    
cGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑c                                                                                                                                     >  2:1126477/1‑140 (MQ=255)
cGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑c                                                                                                                                     <  2:1149550/140‑1 (MQ=255)
 gggCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATTACGATCTA‑cc                                                                                                                                    <  1:1140954/140‑1 (MQ=255)
    cAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAAGCACGATCTA‑ccccc                                                                                                                                 >  2:1022913/1‑139 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑ccccct                                                                                                                                >  2:134883/1‑138 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑ccccct                                                                                                                                >  1:1492748/1‑138 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑ccccct                                                                                                                                >  1:637016/1‑138 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑ccccct                                                                                                                                >  2:86813/1‑138 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑cccc                                                                                                                                  >  1:573690/1‑138 (MQ=255)
     aGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑cccc                                                                                                                                  <  2:573690/138‑1 (MQ=255)
        cATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑cccccttca                                                                                                                             <  2:1492748/140‑6 (MQ=255)
           aaTCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAgg                                                                                                                           <  1:1126477/140‑1 (MQ=255)
             tCAGTGCTCCGGCTTTTTCGTCGATCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGtt                                                                                                                         <  1:896875/140‑1 (MQ=255)
              cAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTc                                                                                                                        <  2:584702/140‑1 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  1:1217574/1‑140 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  1:1085324/1‑140 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  2:1548242/1‑140 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  2:621837/1‑140 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  2:1292282/1‑140 (MQ=255)
                 tGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagc                                                                                                                     >  2:558258/1‑140 (MQ=255)
                   cTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagca                                                                                                                    >  2:217495/1‑139 (MQ=255)
                   cTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTcagca                                                                                                                    <  1:217495/139‑1 (MQ=255)
                      cGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATc                                                                                                                >  2:891817/1‑140 (MQ=255)
                      cGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATc                                                                                                                >  2:287483/1‑140 (MQ=255)
                       ggCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCg                                                                                                               >  2:692218/1‑140 (MQ=255)
                        gCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGt                                                                                                              <  2:82706/140‑1 (MQ=255)
                           ttttCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAg                                                                                                           <  1:86813/140‑1 (MQ=255)
                           ttttCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAg                                                                                                           <  2:637016/140‑1 (MQ=255)
                           ttttCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAg                                                                                                           <  2:1085324/140‑1 (MQ=255)
                            tttCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGc                                                                                                          <  1:1202365/140‑1 (MQ=255)
                            tttCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGc                                                                                                          <  2:61629/140‑1 (MQ=255)
                               cgtcgGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCgg                                                                                                       <  2:638942/140‑1 (MQ=255)
                                  cgGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGttt                                                                                                    >  2:94169/1‑140 (MQ=255)
                                   ggTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTg                                                                                                   >  1:20540/1‑140 (MQ=255)
                                     tCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGtt                                                                                                 <  1:287483/140‑1 (MQ=255)
                                            ttCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCg                                                                                          >  1:1296423/1‑140 (MQ=255)
                                                 tatCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCt                                                                                     >  2:1245593/1‑140 (MQ=255)
                                                   tCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   <  1:548232/140‑1 (MQ=255)
                                                   tCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   <  1:1245593/140‑1 (MQ=255)
                                                   tCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   >  2:909757/1‑140 (MQ=255)
                                                   tCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   <  1:94169/140‑1 (MQ=255)
                                                      gCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTttctt                                                                                >  2:1537906/1‑140 (MQ=255)
                                                        cAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTcc                                                                              <  2:760799/140‑1 (MQ=255)
                                                           atcatcAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTgg                                                                           >  1:121050/1‑140 (MQ=255)
                                                           atcatcAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTgg                                                                           >  1:903757/1‑140 (MQ=255)
                                                             catcaATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  2:121050/140‑1 (MQ=255)
                                                             catcaATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  2:940007/140‑1 (MQ=255)
                                                             catcaATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  1:1022913/140‑1 (MQ=255)
                                                             catcaATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  1:891817/140‑1 (MQ=255)
                                                             catcaATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  1:621837/140‑1 (MQ=255)
                                                               tcaATGCCCTGTTCGGCGAGATCCTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   <  1:1379552/128‑1 (MQ=255)
                                                               tcaATGCCCTGTTCGGCGAGATCCTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCttt                                                                                   >  2:1379552/1‑128 (MQ=255)
                                                                  aTGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    <  1:908133/140‑1 (MQ=255)
                                                                  aTGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    <  1:1537906/140‑1 (MQ=255)
                                                                     cccTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    >  2:240073/1‑137 (MQ=255)
                                                                     cccTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCaa                                                                 >  2:674218/1‑140 (MQ=255)
                                                                     cccTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCaa                                                                 >  1:192780/1‑140 (MQ=255)
                                                                      ccTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         >  2:515104/1‑131 (MQ=255)
                                                                      ccTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGc                                                                         <  1:515104/131‑1 (MQ=255)
                                                                       cTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAAtg                                                               <  2:1217574/140‑1 (MQ=255)
                                                                        tGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTg                                                                            <  1:1499505/126‑1 (MQ=255)
                                                                        tGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTg                                                                            >  2:1499505/1‑126 (MQ=255)
                                                                        tGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAAtgg                                                              >  1:1012379/1‑140 (MQ=255)
                                                                        tGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAAtgg                                                              >  2:789096/1‑140 (MQ=255)
                                                                        tGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAAtgg                                                              >  2:1209931/1‑140 (MQ=255)
                                                                         gTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAAtggt                                                             <  2:1296423/140‑1 (MQ=255)
                                                                          ttCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    <  1:612246/132‑1 (MQ=255)
                                                                          ttCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    >  2:1391061/1‑132 (MQ=255)
                                                                          ttCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    >  2:612246/1‑132 (MQ=255)
                                                                          ttCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCtgtg                                                                    <  1:1391061/132‑1 (MQ=255)
                                                                            cGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGc                                                          <  1:558258/140‑1 (MQ=255)
                                                                              gCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCa                                                        <  1:134883/140‑1 (MQ=255)
                                                                               cGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAg                                                       >  1:1122404/1‑140 (MQ=255)
                                                                                 agaTCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTg                                                     <  1:692218/140‑1 (MQ=255)
                                                                                      ttCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCAttt                                                >  1:242073/1‑140 (MQ=255)
                                                                                           gCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGc                                           >  1:79367/1‑140 (MQ=255)
                                                                                            cGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCa                                          <  1:674218/140‑1 (MQ=255)
                                                                                            cGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCa                                          <  2:903757/140‑1 (MQ=255)
                                                                                            cGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCa                                          >  2:664562/1‑140 (MQ=255)
                                                                                              tACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGc                                                          >  2:783048/1‑122 (MQ=255)
                                                                                              tACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGc                                                          <  1:783048/122‑1 (MQ=255)
                                                                                              tACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACg                                        >  1:997823/1‑140 (MQ=255)
                                                                                              tACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACg                                        >  2:629668/1‑140 (MQ=255)
                                                                                              tACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACg                                        >  1:715444/1‑140 (MQ=255)
                                                                                                  aaCGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTcg                                    >  1:317136/1‑140 (MQ=255)
                                                                                                    cGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTcgcg                                  <  1:148174/140‑1 (MQ=255)
                                                                                                    cGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTcgcg                                  <  2:317136/140‑1 (MQ=255)
                                                                                                    cGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTcgcg                                  <  1:629668/140‑1 (MQ=255)
                                                                                                    cGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTcgcg                                  <  1:1292282/140‑1 (MQ=255)
                                                                                                     gCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCgcgc                                 <  1:1548242/140‑1 (MQ=255)
                                                                                                         cGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATTGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTg                             >  1:346082/1‑140 (MQ=255)
                                                                                                         cGGGCGGCCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTg                             <  2:715444/140‑1 (MQ=255)
                                                                                                               gcCAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCaa                       <  2:79367/140‑1 (MQ=255)
                                                                                                                 cAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAg                               >  1:509184/1‑130 (MQ=255)
                                                                                                                 cAGTTTGAATGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACg                     <  1:909757/140‑1 (MQ=255)
                                                                                                                          tGCCAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCtca            >  1:1115390/1‑140 (MQ=255)
                                                                                                                             cAAATCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCtcatca         >  1:1428761/1‑140 (MQ=255)
                                                                                                                              aaaTCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGACCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCTCATCaa        >  1:97097/1‑140 (MQ=255)
                                                                                                                                aTCACGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCTCATCAAgg      <  2:242073/140‑1 (MQ=255)
                                                                                                                                    cGATCTACCCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCTCATCAAGGCCtt  <  2:20540/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                    
CGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCGGCGAGATCTTCCAGCGTACAAACGCCACGGGCGGCCAGTTTGAATGCCAAATCACGATCTA‑CCCCTTCAAGGTTCAGCAGATCGTCAGCCGGTTTGTTATCACCGAGGCTTTCTTCCTGGGCCTGTGCAATGGTGGCCAGTGCATTTTTAGCACGCTCGCGCAGTGCTTCAACGGTCGGCTCATCAAGGCCTT  >  NC_000913/3316070‑3316340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑