| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,594,961 | (C)5→6 | pseudogene (3126/5422 nt) | yneO ← | AIDA‑I family autotransporter YneO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,594,956 | 1 | . | C | 97.4% | 269.3 / ‑0.7 | 78 | pseudogene (3131/5422 nt) | yneO | AIDA‑I family autotransporter YneO |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (38/38); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
ATCTGCCCGGTGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑CCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGCCATGTTCGGCT > NC_000913/1594818‑1595084 | aTCTGCCCGGTGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑c < 1:1238130/140‑1 (MQ=255) cTGCCCGGTGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑ccc > 1:33103/1‑140 (MQ=255) ccGGTGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑cccccct < 1:826070/140‑3 (MQ=255) tGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATa > 1:220419/1‑140 (MQ=255) gAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGAGGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCATGTGCACCATCCGCATCGGTACGTAATGTCCCCATCGGAACGTAGGTTGCCCCCCTGATAg < 2:1362773/140‑1 (MQ=255) tctcTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGtt < 1:1293760/140‑1 (MQ=255) tctACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCt < 1:186211/140‑1 (MQ=255) tctACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCt < 2:1223326/140‑1 (MQ=255) tACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGa < 1:1491728/140‑1 (MQ=255) ccGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTAGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGAcc > 2:1276438/1‑140 (MQ=255) tCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGtt > 2:1292369/1‑140 (MQ=255) cTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTg > 2:967454/1‑140 (MQ=255) tGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCt > 1:1433371/1‑131 (MQ=255) tGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCt < 2:1433371/131‑1 (MQ=255) tGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTgg > 1:156046/1‑140 (MQ=255) tGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTgg > 1:254925/1‑140 (MQ=255) tGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑‑‑CCCTGATAGTCGTTCTGACCGTTGGaaa > 1:124503/1‑140 (MQ=255) gCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGa < 2:69105/140‑1 (MQ=255) gCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGa > 2:1603559/1‑140 (MQ=255) gATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCg > 1:53487/1‑140 (MQ=255) aTCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGa > 1:80802/1‑140 (MQ=255) tCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGaa < 1:891380/140‑1 (MQ=255) ttAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCt > 1:60486/1‑140 (MQ=255) tAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTg < 1:917524/140‑1 (MQ=255) tAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTg > 2:795213/1‑140 (MQ=255) gATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCg < 2:60486/140‑1 (MQ=255) gATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCg < 2:220419/140‑1 (MQ=255) gATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCg < 1:814481/140‑1 (MQ=255) gATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCg < 1:1603559/140‑1 (MQ=255) aTCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGc < 1:955414/140‑1 (MQ=255) aTCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGc < 2:80802/140‑1 (MQ=255) aTCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGc < 2:1512186/140‑1 (MQ=255) tCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCa > 2:776827/1‑140 (MQ=255) tCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCa < 1:1462719/140‑1 (MQ=255) cgacgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCAc > 2:1422698/1‑140 (MQ=255) gacgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCAcc > 2:920102/1‑140 (MQ=255) acgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCg < 1:1355127/140‑1 (MQ=255) acgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCg > 1:447608/1‑140 (MQ=255) acgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCg < 2:572777/140‑1 (MQ=255) acgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCg < 1:157849/140‑1 (MQ=255) cgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGc < 1:592779/135‑1 (MQ=255) cgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGc > 2:592779/1‑135 (MQ=255) cgaTGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGt > 2:606988/1‑140 (MQ=255) tGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTatt > 1:1480752/1‑140 (MQ=255) tGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTatt > 2:550198/1‑140 (MQ=255) tGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTatt > 1:1482541/1‑140 (MQ=255) ggCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTattg < 1:606988/140‑1 (MQ=255) gCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTg < 2:611048/126‑1 (MQ=255) gCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTg > 1:611048/1‑126 (MQ=255) gCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTattga < 1:967454/140‑1 (MQ=255) gCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTattga < 1:1292369/140‑1 (MQ=255) gCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTattga < 2:1482541/140‑1 (MQ=255) gCCGCGTAGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTattga < 1:1276438/140‑1 (MQ=255) gTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑‑‑CCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGa < 2:124503/140‑1 (MQ=255) gCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGa < 2:33103/140‑1 (MQ=255) tGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATc < 2:116104/140‑1 (MQ=255) cAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTca > 1:477235/1‑140 (MQ=255) cAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTca > 1:399152/1‑140 (MQ=255) ttCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTcacca > 2:120475/1‑140 (MQ=255) gggTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGAt < 1:1449115/140‑1 (MQ=255) gCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGcc < 1:317436/140‑1 (MQ=255) gCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGcc < 1:920102/140‑1 (MQ=255) gTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACat > 1:1556715/1‑140 (MQ=255) gTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACat > 1:218932/1‑140 (MQ=255) cACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATc < 1:1422698/140‑1 (MQ=255) cACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATc > 2:338017/1‑140 (MQ=255) cACCATCCACATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATc > 1:1140120/1‑140 (MQ=255) aCCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGcc > 2:1175042/1‑131 (MQ=255) aCCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGcc < 1:1175042/131‑1 (MQ=255) tCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCg > 2:110835/1‑140 (MQ=255) tCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCg < 1:110835/140‑1 (MQ=255) gCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTg < 2:399152/140‑1 (MQ=255) ggTACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCa > 1:364090/1‑140 (MQ=255) tACGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATa > 1:435111/1‑140 (MQ=255) aCGTAATGTCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAg > 1:1207327/1‑140 (MQ=255) tCCCCATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGcc < 1:338017/140‑1 (MQ=255) ccccATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTTTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGAGTTTTGCCGACATAACGGCCGTTGCGCCATAGGCTACGCCa > 2:1472029/1‑140 (MQ=255) ccccATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGcta > 1:1274767/1‑138 (MQ=255) ccATCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGCCATg < 2:477235/140‑1 (MQ=255) tCTGAACGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGCCATGTTc > 2:807251/1‑140 (MQ=255) aaCGTAGGTTGCCCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGCCATGTTCGGCt > 2:671349/1‑140 (MQ=255) | ATCTGCCCGGTGAATGTCTCTACCGTCTGCGTCGATCCATTAAGATCGACGATGGCCGCGTTGCTGATGTTCAGTTCCCGGGTGTTGCCAAGTGCACCATCCGCATCGGTACGTAATGTCCCCATCTGAACGTAGGTTG‑CCCCCTGATAGTCGTTCTGACCGTTGGAAAGCGAAACCTGTCGCACCGTATTGATTGCCAGATCCCCTTCACCACCGATTTTTGCCGACATATCGGCCGTTGCGCCATAGGCTCCGCCATGTTCGGCT > NC_000913/1594818‑1595084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |