| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 646,760 | 0 | T | C | 24.0% | 149.6 / 26.1 | 76 | K250K (AAA→AAG) | citG | triphosphoribosyl‑dephospho‑CoA synthase |
| Reads supporting (aligned to +/- strand): ref base T (8/49); new base C (18/0); total (26/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCC > NC_000913/646623‑646898 | ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCttt < 1:783869/140‑1 (MQ=255) aaaTAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GTCCCCctttt > 2:691060/1‑140 (MQ=255) atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGACA‑GCCCCCCCTTTTCaat > 2:487964/1‑140 (MQ=255) gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTgc < 1:730820/140‑1 (MQ=255) gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCTATAAAGttttt > 2:1593411/1‑138 (MQ=255) gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAGT‑GGCCCCCTTTTTTAATAATGTTTgt > 2:860529/1‑139 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTTAATAATtttttcc > 1:664736/1‑137 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTTTTtcg > 1:1134038/1‑140 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAA‑GCCCCCCTTTTTCCATAATGtttttg > 1:1220800/1‑137 (MQ=255) gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTTTTtcgc > 2:1589942/1‑140 (MQ=255) tAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCC‑TTTTGCAATAATGTTTGCGCCTc < 1:1519477/140‑1 (MQ=255) gagacagaGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 1:135599/133‑1 (MQ=255) aaaaaCCAGGTAAGGAACAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 2:309699/140‑1 (MQ=255) aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTTTTTCGCCTcc > 1:1084847/1‑139 (MQ=255) gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GGCCCCCTTTTTTTATAAATTTTTTTCCCCGCGCTGTAg > 2:424054/1‑140 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 1:80565/140‑1 (MQ=255) aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGACT‑GCCCCCCTTCTTCAATAATATTTTCGCCCCGCCCCGTAGCCAccg > 2:1149382/1‑140 (MQ=255) cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGGCCCCCTTTTTTC‑ATAAAGTTTGTGCCTCGCCCTCTTGCCAgcgac > 2:1078279/1‑138 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GGCCCCCTTTTTTAATAAATTTTTCGCCTCCCGCGGTAGCCAccgccg > 2:4769/1‑138 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCCATAATATTTTCGCCCCGCGCCGTAGccctgtctc > 2:135599/1‑133 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAAATTTTTTGCCTCCCCCTGGTGCCAgcgccg > 2:1581085/1‑138 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGGTGGAT‑GCCCCCCTTTTTTAATAAAGTTTTTGCCTCGCGCTGTAGGCAgcgccg > 1:1222790/1‑138 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGTAT‑GCCCCCCTTTTTCAATAAAATTTTCGCCTCGCGCCGTAGGCAGCGCA‑‑gg > 1:202294/1‑140 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCCATAAATTTTTTGCCCCCCGCCGTAGCCCGCGCA‑‑gg > 2:921803/1‑140 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTTTTTCGCCCCCCGCCGTAGCCCGCGCC‑‑gg > 1:382783/1‑140 (MQ=255) agaGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑gg < 1:632269/138‑1 (MQ=255) tAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GCCCCCTTTTTTTGATAATGTTTTTGCCTCGCGCCGTGGGCAGCGCG‑‑GGc > 2:1042195/1‑140 (MQ=255) gggTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGcc < 1:1618263/139‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGcc < 2:699101/140‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGcc < 1:661916/140‑1 (MQ=255) gTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GGCCCCCTTTTTCAATAAATTTTTCGCCCCCCGCCGTAGGCCGCGCA‑‑GGcccc > 2:661916/1‑140 (MQ=255) tCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTTAATAATATTTTTGCCTCGCGCCGTAGCCCGCGCA‑‑GGccccc > 2:464570/1‑140 (MQ=255) cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAAATTTTTTGCCCCGCGCTGTAGCCCGCGCC‑‑GGcccccc > 2:637128/1‑140 (MQ=255) gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAT‑GCCCCCCTTTTTCAATAAAATTTTCGCCCCCCGCCGTTGCCAGCGCC‑‑GGcccccccc > 2:39145/1‑138 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCCCGCCGTAGCCAGCGCC‑‑GGccccccccc > 1:563164/1‑137 (MQ=255) cTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATATTTTCGCCCCCCCCTGTAGCCCGCGCG‑‑GGccccccccccc > 2:709570/1‑135 (MQ=255) tGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTTAATAAATTTTTCGCCCCCCCCCGTAGCCAGCGCC‑‑GGcccccccccccc > 2:808549/1‑134 (MQ=255) gccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGCAT‑GCCCCCCTTTTTTAATAAAATTTTTGCCCCCCGCCCGAGGCCGCGCG‑‑GGccccccccccccc > 2:632269/1‑133 (MQ=255) ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGGT‑GACCCCCTTTTTTTATAAAATTTACGCCTTGCGCTGTAGGCAACGCAGGGGCCCCCCTCTccc > 2:1618263/1‑139 (MQ=255) ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTGGAAT‑GCCCCCTTTTTGCCATAATTTTTTCGCCTCCCCGCGTAGCCCGCGCA‑‑GGCCCCCCTCcccccc > 2:850685/1‑140 (MQ=255) ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACcgcg < 1:916513/140‑1 (MQ=255) cTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACcgcgc < 1:1042195/140‑1 (MQ=255) ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGa < 1:457194/140‑1 (MQ=255) ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGa < 1:808549/140‑1 (MQ=255) gACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGAt < 1:424054/140‑1 (MQ=255) gagaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCaa < 1:1121964/140‑1 (MQ=255) cgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCg < 1:929225/140‑1 (MQ=255) aTACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAT‑GCCCCCCTTTTTTTATAATTTTTTTGCCCCGCGCTGTAGCCCGCGCC‑‑GGCCCCCCCCCCCCCCCCGCGGTGCCACGTTGGTATCGcc > 2:679007/1‑140 (MQ=255) tCCCTGTCGAACTGCGGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCGCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGAt < 2:1220800/140‑1 (MQ=255) tCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGAt < 1:1581085/140‑1 (MQ=255) cTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAT‑GCCCCCCTTTTGTAATAATATTTTCGCCCCCCGCTGTAGCCAGCGCA‑‑GGCCCCCCCCCCCCCCCCCCCATGCAACGTTGGTATTGCCGCTGTTCGc > 2:1529902/1‑140 (MQ=255) tGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc > 2:1118313/1‑140 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa < 1:931688/140‑1 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa < 1:464570/140‑1 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAAT‑GGCCCCCTTTTTCCATAAAGTTTTTGCCCCCCCCCGTAGCCACCGCC‑‑GGCCCCCCCCCCCCCCCCCCGGTGCCACGTTGGGATCGCCGGTGGTCGccc > 2:898660/1‑139 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCGCCCTGTAGCCAGCGCC‑‑GGCCCCCCCCCCCCCCCCCCGATGCAACGGTGGTATCGCCGGTGATCGccc > 2:729522/1‑139 (MQ=255) tCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCAt < 1:1459587/140‑1 (MQ=255) tCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCAt < 2:563164/140‑1 (MQ=255) aaCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAg < 1:265163/140‑1 (MQ=255) aaCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAg < 1:575274/140‑1 (MQ=255) aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 1:1078279/140‑1 (MQ=255) aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 2:1222790/140‑1 (MQ=255) aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 2:1577657/140‑1 (MQ=255) aCTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCCGCGCC‑‑GGGCCCCCCCCCCCCCCCGCCATGCAACGTTGGTATCGCCGGTGGTCGCCCTCCGt > 2:871589/1‑140 (MQ=255) tGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAT‑GCCCCCCTTTTTCAATAAAGTTTTTGCCCCCCGCCGTAGCCCGCGCC‑‑GGCCCCCCCCCCCCCCCCGCCGTGCAACGTTGGTATCGCCCCTGGTCGCCATCCGTAg > 2:265163/1‑140 (MQ=255) ccGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGa < 1:1430461/140‑1 (MQ=255) ggAGATAATCGAGATCGGCGGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATGTTTTTGCCCCCCGCCGTAGCCCGCGCC‑‑GGCCCCCCCCCCCCCCCCCCCCTGCAACGTTGGGGTCGCCGTTGATCGCCACCAGTAGGAGc > 2:300884/1‑140 (MQ=255) gagaTAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 1:1589942/140‑1 (MQ=255) aaTCGAGATCGGCGGGGGGTTGAAT‑GCCCCCCTTTTTCAATAAAATTTTCGCCCCCCGCTGTAGCCAGCGCA‑‑GGCCCCCCCCCCCCCCCCGCGGCGCGACGTTGGGATCGCCGTTGGTTGCCCTCAGTAGGAGGAAggga > 2:701496/1‑138 (MQ=255) aTCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 2:1584789/140‑1 (MQ=255) aTCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 1:1458137/140‑1 (MQ=255) aTCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 2:869023/140‑1 (MQ=255) gaTCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc < 1:1561611/140‑1 (MQ=255) gaTCGGCGGGGGGTCGGAT‑GGCCCCCTTTTTTAATAAAGTTTTTGCCCCCCGCCGTAGCCAGCGCA‑‑GGCCCCCCCCCCCCCCCCCCCAGGCAACCTTGGTATTGCCGTTTATCGCCCTCACTAGGAGGAAAGGATCTAGc > 2:1247709/1‑140 (MQ=255) ggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt < 1:921803/140‑1 (MQ=255) ttCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa < 1:1118313/140‑1 (MQ=255) tCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAg < 2:382783/140‑1 (MQ=255) aaT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc < 1:844667/135‑1 (MQ=255) aaT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc > 2:844667/1‑135 (MQ=255) aaT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGAt < 1:300884/140‑1 (MQ=255) aaT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGAt > 2:1593522/1‑140 (MQ=255) t‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCt < 2:1134038/140‑1 (MQ=255) gCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc > 1:228425/1‑126 (MQ=255) gCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc < 2:228425/126‑1 (MQ=255) gCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTa < 2:202294/140‑1 (MQ=255) cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCt > 1:1304427/1‑138 (MQ=255) cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCt < 2:1304427/138‑1 (MQ=255) cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTaa > 2:1559705/1‑140 (MQ=255) ccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa < 2:373850/131‑1 (MQ=255) ccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa > 1:373850/1‑131 (MQ=255) ccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAc > 1:1099439/1‑140 (MQ=255) cccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcc < 2:936092/140‑1 (MQ=255) cccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcc < 1:725015/140‑1 (MQ=255) ccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAccc < 1:647927/140‑1 (MQ=255) cTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcccc < 1:1247709/140‑1 (MQ=255) cTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcccc < 1:285178/140‑1 (MQ=255) cTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcccc < 1:679007/140‑1 (MQ=255) cTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCAAGTTCAGGATCTAAcccc < 2:1213029/140‑1 (MQ=255) | TTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCA‑‑GGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCC > NC_000913/646623‑646898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |