Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,764,942 T→C D71G (GAC→GGC)  abpA ← CP4‑57 prophage; anti‑bacteriophage protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,764,9420TC100.0% 561.7 / NA 159D71G (GAC→GGC) abpACP4‑57 prophage; anti‑bacteriophage protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (87/72);  total (87/72)

Only 100 of 160 total aligned reads displayed.

TTTTGTTGACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGTCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTCGGGTG  >  NC_000913/2764805‑2765076
                                                                                                                                         |                                                                                                                                      
ttttGTTGACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGccc                                                                                                                                      >  1:141272/1‑140 (MQ=255)
  ttgttgACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGa                                                                                                                                    >  2:694408/1‑140 (MQ=255)
  ttgttgACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGa                                                                                                                                    >  1:38662/1‑140 (MQ=255)
  ttgttgACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGa                                                                                                                                    >  1:1091746/1‑140 (MQ=255)
  ttgttgACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGa                                                                                                                                    >  1:299603/1‑140 (MQ=255)
            tttCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCaa                                                                                                                          <  2:65630/140‑1 (MQ=255)
             ttCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAAc                                                                                                                         >  1:120315/1‑140 (MQ=255)
              tCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACg                                                                                                                        <  2:1091746/140‑1 (MQ=255)
               ccTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGaa                                                                                                                                   <  2:1465431/128‑1 (MQ=255)
               ccTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGaa                                                                                                                                   >  1:1465431/1‑128 (MQ=255)
               ccTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACgt                                                                                                                       >  2:765876/1‑140 (MQ=255)
                      gACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGc                                                                                                                <  2:141272/140‑1 (MQ=255)
                       aCGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCa                                                                                                                           <  1:1468279/128‑1 (MQ=255)
                       aCGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCa                                                                                                                           >  2:1468279/1‑128 (MQ=255)
                          aTGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGt                                                                                                            >  1:95290/1‑140 (MQ=255)
                             gAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCgg                                                                                                             <  2:805185/136‑1 (MQ=255)
                               gTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCttt                                                                                                       >  2:123916/1‑140 (MQ=255)
                                    tACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTAcc                                                                                                  >  2:1499008/1‑140 (MQ=255)
                                     aCGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCt                                                                                                 >  1:1384520/1‑140 (MQ=255)
                                     aCGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCt                                                                                                 >  2:844724/1‑140 (MQ=255)
                                      cGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTg                                                                                                >  1:738527/1‑140 (MQ=255)
                                       gTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCttt                                                                                                       <  2:1467059/132‑1 (MQ=255)
                                       gTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCttt                                                                                                       >  1:1467059/1‑132 (MQ=255)
                                       gTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGa                                                                                               >  1:791647/1‑140 (MQ=255)
                                        tCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGATTTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGaa                                                                                              >  1:1353016/1‑140 (MQ=255)
                                          cAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACg                                                                                            >  1:1388553/1‑140 (MQ=255)
                                          cAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACg                                                                                            >  1:4807/1‑140 (MQ=255)
                                           aaGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGa                                                                                           <  2:394569/140‑1 (MQ=255)
                                            aGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGaa                                                                                          <  1:765876/140‑1 (MQ=255)
                                            aGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGaa                                                                                          >  1:1492773/1‑140 (MQ=255)
                                            aGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGaa                                                                                          >  1:448910/1‑140 (MQ=255)
                                             gggACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAg                                                                                         <  2:222141/140‑1 (MQ=255)
                                                 cAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGa                                                                                     >  1:793266/1‑140 (MQ=255)
                                                  aGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGAt                                                                                    <  1:694408/140‑1 (MQ=255)
                                                  aGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGAt                                                                                    >  2:692008/1‑140 (MQ=255)
                                                  aGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGAt                                                                                    <  1:426705/140‑1 (MQ=255)
                                                   ggTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATg                                                                                   >  2:571015/1‑140 (MQ=255)
                                                   ggTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATg                                                                                   >  2:1066156/1‑140 (MQ=255)
                                                    gTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGt                                                                                  >  1:89329/1‑140 (MQ=255)
                                                      cAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  1:1378139/140‑1 (MQ=255)
                                                      cAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  1:1246857/140‑1 (MQ=255)
                                                      cAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  1:123916/140‑1 (MQ=255)
                                                         aCTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCa                                                                             >  2:1201308/1‑140 (MQ=255)
                                                           tCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATc                                                                           <  2:793182/140‑1 (MQ=255)
                                                              cacTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCTCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCg                                                                                      <  2:249193/126‑1 (MQ=255)
                                                              cacTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGt                                                                                        <  1:288607/124‑1 (MQ=255)
                                                              cacTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGt                                                                                        >  2:288607/1‑124 (MQ=255)
                                                              cacTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCg                                                                                      >  1:249193/1‑126 (MQ=255)
                                                              cacTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGa                                                                        <  2:1384520/140‑1 (MQ=255)
                                                                  gCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACa                                                                    <  1:660180/140‑1 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  1:1004270/127‑1 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                >  2:1004270/1‑127 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  1:1060450/127‑1 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATc                                                                           >  2:649078/1‑132 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATc                                                                           <  1:649078/132‑1 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATa                                                                      <  2:150195/137‑1 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATa                                                                      >  1:150195/1‑137 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACaa                                                                   >  2:1637185/1‑140 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACaa                                                                   >  2:76572/1‑140 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACaa                                                                   >  2:355089/1‑140 (MQ=255)
                                                                   cATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTACCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                >  2:1060450/1‑127 (MQ=255)
                                                                     ttGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATg                                                                 <  1:385082/140‑1 (MQ=255)
                                                                        aTTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                >  1:1663731/1‑122 (MQ=255)
                                                                        aTTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTAt                                                                                <  2:1663731/122‑1 (MQ=255)
                                                                        aTTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCg                                                              >  1:796558/1‑140 (MQ=255)
                                                                           tgtgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGata                                                           <  1:76572/140‑1 (MQ=255)
                                                                             tgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGatatt                                                         >  2:247592/1‑139 (MQ=255)
                                                                             tgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATc                                                         >  2:1381202/1‑140 (MQ=255)
                                                                             tgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATc                                                         >  1:570977/1‑140 (MQ=255)
                                                                             tgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATc                                                         >  2:71508/1‑140 (MQ=255)
                                                                             tgCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATc                                                         <  1:1637185/140‑1 (MQ=255)
                                                                                       aaCTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGAcc                                               <  1:227616/140‑1 (MQ=255)
                                                                                         cTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGGAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTc                                             <  2:371651/140‑1 (MQ=255)
                                                                                         cTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTc                                             <  2:40316/140‑1 (MQ=255)
                                                                                         cTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTc                                             <  1:355089/140‑1 (MQ=255)
                                                                                         cTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTc                                             <  2:89329/140‑1 (MQ=255)
                                                                                          tGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCg                                            <  2:4807/140‑1 (MQ=255)
                                                                                            cAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCtg                                                    <  1:1181111/130‑1 (MQ=255)
                                                                                            cAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCtg                                                    >  2:1181111/1‑130 (MQ=255)
                                                                                            cAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGc                                           <  2:966044/139‑1 (MQ=255)
                                                                                              ggggATCATCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAgc                                        >  2:1335641/1‑140 (MQ=255)
                                                                                               gggATCGTCTTTTTATAAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAgcg                                       <  2:1492773/140‑1 (MQ=255)
                                                                                                 gATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGca                                     >  2:898261/1‑140 (MQ=255)
                                                                                                    cGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGAATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCacac                                  <  1:571015/140‑1 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAgcgc                                      <  1:1041305/134‑1 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAgcgc                                      >  2:1041305/1‑134 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTg                                >  1:1481907/1‑140 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTg                                >  1:1638115/1‑140 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTg                                >  2:1198298/1‑140 (MQ=255)
                                                                                                      tCTTTTTATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAACTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGAcc                                               <  1:968754/125‑1 (MQ=255)
                                                                                                           ttATCAGCACCTTTTGATTTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATTCAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGAt                           <  2:1481907/140‑1 (MQ=255)
                                                                                                           ttATCAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGAt                           <  2:1638115/140‑1 (MQ=255)
                                                                                                               cAGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTc                       <  1:118365/140‑1 (MQ=255)
                                                                                                                aGCACCTTTTGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCt                      <  1:1066156/140‑1 (MQ=255)
                                                                                                                        ttGAATTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGG‑GCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGaa             >  1:730266/1‑140 (MQ=255)
                                                                                                                            aTTCTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCa          <  2:195787/140‑1 (MQ=255)
                                                                                                                               cTGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTc       >  2:1170135/1‑140 (MQ=255)
                                                                                                                                tGAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTCg      <  1:1572235/140‑1 (MQ=255)
                                                                                                                                 gAACGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTCgg     <  2:570977/140‑1 (MQ=255)
                                                                                                                                  aaCGATGCCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTCggg    >  2:1341521/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
TTTTGTTGACCTTTTCCTCTGTGACGATGGAGTACCTACGTCCAAGGGACAGGTCAGACTCACACTGCATTGATTTGTGCAAAATTGAACTGCAGGGGATCGTCTTTTTATCAGCACCTTTTGAATTCTGAACGATGTCCGAAATGTTCCAACGTGTTTTGCCGGTGCTTTTTACCTGAACGAAGTCGATGTATCCATCAGATACAATGTCGATATCGTCTGTGACCTCGCAGCGCACACTGCGGATAGTCTTGTCACGAAGCATTCGGGTG  >  NC_000913/2764805‑2765076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑