BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,529,359	A→G	K4K (AAA→AAG)	hslR →	heat shock protein Hsp15

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,529,359	0	A	G	100.0%	366.6 / NA	103	K4K (AAA→AAG)	hslR	heat shock protein Hsp15
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/48); total (55/48)

Only 100 of 104 total aligned reads displayed.

GGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTC  >  NC_000913/3529224‑3529494

ggTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCctg                                                                                                                                     <  1:1104762/140‑1 (MQ=255)

    ttCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGt                                                                                                                                 <  2:617850/140‑1 (MQ=255)

     tCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGtt                                                                                                                                <  1:459091/140‑1 (MQ=255)

       gTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGa                                                                                                                              >  2:1610515/1‑140 (MQ=255)

       gTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGa                                                                                                                              >  1:1580450/1‑140 (MQ=255)

         tACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAgg                                                                                                                            <  2:543550/140‑1 (MQ=255)

         tACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAgg                                                                                                                            <  1:1345494/140‑1 (MQ=255)

           cTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGtt                                                                                                                          >  1:497119/1‑140 (MQ=255)

           cTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGtt                                                                                                                          >  1:389347/1‑140 (MQ=255)

           cTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCC‑‑GAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCg                                                                                                                        >  1:1165623/1‑140 (MQ=255)

            tGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTc                                                                                                                         >  1:1236703/1‑140 (MQ=255)

            tGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCC‑‑GAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGa                                                                                                                       <  2:1165623/140‑1 (MQ=255)

              ccTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCctg                                                                                                                                     <  1:994826/126‑1 (MQ=255)

              ccTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGa                                                                                                                       >  2:530193/1‑140 (MQ=255)

              ccTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGa                                                                                                                       <  2:520285/140‑1 (MQ=255)

               cTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGAc                                                                                                                      <  1:591749/140‑1 (MQ=255)

               cTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGAc                                                                                                                      <  2:1236703/140‑1 (MQ=255)

                tCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACt                                                                                                                     >  2:1192534/1‑140 (MQ=255)

                      tGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGATGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATaa                                                                                                               >  2:1571863/1‑140 (MQ=255)

                      tGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATaa                                                                                                               >  2:688977/1‑140 (MQ=255)

                       gACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATaaa                                                                                                              <  2:795740/140‑1 (MQ=255)

                           aaTCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGc                                                                                                          <  2:389347/140‑1 (MQ=255)

                           aaTCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGc                                                                                                          <  2:497119/140‑1 (MQ=255)

                            aTCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCt                                                                                                         <  1:1192534/140‑1 (MQ=255)

                             tCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTa                                                                                                        >  2:969106/1‑140 (MQ=255)

                              ccTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATaaa                                                                                                              >  2:831620/1‑133 (MQ=255)

                              ccTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATaaa                                                                                                              <  1:831620/133‑1 (MQ=255)

                                    tCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTg                                                                                                 <  2:716254/140‑1 (MQ=255)

                                      cGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGcc                                                                                               >  2:732604/1‑140 (MQ=255)

                                       gggATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGccg                                                                                              >  2:484033/1‑139 (MQ=255)

                                       gggATCGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGccc                                                                                              >  1:139411/1‑140 (MQ=255)

                                        ggATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCg                                                                                             >  2:547944/1‑140 (MQ=255)

                                            tGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGtttt                                                                                         >  1:713531/1‑140 (MQ=255)

                                              ccGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTta                                                                                       >  2:13190/1‑140 (MQ=255)

                                                      cAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAAccc                                                                               <  2:139411/140‑1 (MQ=255)

                                                        gTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAAccc                                                                               <  2:696896/138‑1 (MQ=255)

                                                        gTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAAccc                                                                               >  1:696896/1‑138 (MQ=255)

                                                        gTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgc                                                                             >  1:1618534/1‑140 (MQ=255)

                                                        gTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgc                                                                             <  2:548657/140‑1 (MQ=255)

                                                           tCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgcgcg                                                                          >  1:167762/1‑140 (MQ=255)

                                                           tCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgcgcg                                                                          <  1:547944/140‑1 (MQ=255)

                                                           tCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgcgcg                                                                          >  2:178928/1‑140 (MQ=255)

                                                           tCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCcgcgcg                                                                          <  1:13190/140‑1 (MQ=255)

                                                             aaCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCt                                                                        <  1:530193/140‑1 (MQ=255)

                                                             aaCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCt                                                                        <  2:167762/140‑1 (MQ=255)

                                                             aaCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCACTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCt                                                                        >  1:1371912/1‑140 (MQ=255)

                                                              aCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATaa                                                                                    >  2:1065586/1‑127 (MQ=255)

                                                              aCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATaa                                                                                    <  1:1065586/127‑1 (MQ=255)

                                                              aCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTg                                                                       <  1:1610515/140‑1 (MQ=255)

                                                               cGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTgg                                                                      <  1:969106/140‑1 (MQ=255)

                                                                gCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGc                                                                     >  2:10948/1‑140 (MQ=255)

                                                                   aTCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGATGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCg                                                                  <  1:1571863/140‑1 (MQ=255)

                                                                   aTCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCGGTTTTTATAAAACCCGCGCGCTGGCCCg                                                                  <  1:484033/140‑1 (MQ=255)

                                                                   aTCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCg                                                                  >  2:1163653/1‑140 (MQ=255)

                                                                         cACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAAt                                                            >  2:461923/1‑140 (MQ=255)

                                                                          aCTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATg                                                           >  1:1252543/1‑140 (MQ=255)

                                                                              aaTGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTgg                                                                      >  2:1193055/1‑125 (MQ=255)

                                                                              aaTGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTgg                                                                      <  1:1193055/125‑1 (MQ=255)

                                                                               aTGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGa                                                      <  2:1311904/140‑1 (MQ=255)

                                                                                 gACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAg                                                    >  2:1338096/1‑140 (MQ=255)

                                                                                  aCTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAgg                                                   >  1:733595/1‑140 (MQ=255)

                                                                                  aCTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAgg                                                   >  2:63170/1‑140 (MQ=255)

                                                                                   cTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGAtt                                                        >  2:830316/1‑134 (MQ=255)

                                                                                   cTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGAtt                                                        <  1:830316/134‑1 (MQ=255)

                                                                                   cTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGc                                                  >  2:420734/1‑140 (MQ=255)

                                                                                   cTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGc                                                  >  1:1027547/1‑140 (MQ=255)

                                                                                    tACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCg                                                 <  1:628497/140‑1 (MQ=255)

                                                                                       cgccgcCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTa                                              <  2:733595/140‑1 (MQ=255)

                                                                                       cgccgcCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTa                                              <  2:1252543/140‑1 (MQ=255)

                                                                                        gccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCg                                                 >  1:1325948/1‑136 (MQ=255)

                                                                                        gccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCg                                                 <  2:1325948/136‑1 (MQ=255)

                                                                                        gccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTaa                                             >  1:1662638/1‑140 (MQ=255)

                                                                                         ccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAg                                            <  1:63170/140‑1 (MQ=255)

                                                                                         ccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAg                                            <  2:713531/140‑1 (MQ=255)

                                                                                         ccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAg                                            <  1:10948/140‑1 (MQ=255)

                                                                                          cgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAgg                                           <  1:1213915/140‑1 (MQ=255)

                                                                                          cgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTCGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAgg                                           <  2:1027547/140‑1 (MQ=255)

                                                                                            ccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTg                                         <  2:1662638/140‑1 (MQ=255)

                                                                                            ccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTg                                         >  2:1498402/1‑140 (MQ=255)

                                                                                            ccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTg                                         >  1:674591/1‑140 (MQ=255)

                                                                                            ccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGAT‑AATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGc                                        >  1:1576315/1‑140 (MQ=255)

                                                                                              tGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCa                                       <  1:179620/140‑1 (MQ=255)

                                                                                              tGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCa                                       <  1:178928/140‑1 (MQ=255)

                                                                                              tGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCa                                       <  1:1414667/140‑1 (MQ=255)

                                                                                                     cTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAAc                                >  1:1189545/1‑140 (MQ=255)

                                                                                                        gCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACggg                             <  1:461923/140‑1 (MQ=255)

                                                                                                        gCTAATGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACggg                             <  2:1189545/140‑1 (MQ=255)

                                                                                                        gCTAAAGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCa                                       <  2:987053/130‑1 (MQ=255)

                                                                                                        gCTAAAGTGAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCa                                       >  1:987053/1‑130 (MQ=255)

                                                                                                             tgtgAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcg                        >  2:1138479/1‑140 (MQ=255)

                                                                                                               tgAAGGAGACGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcgca                      <  2:1618534/140‑1 (MQ=255)

                                                                                                                      gaCGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGcc               >  2:258032/1‑140 (MQ=255)

                                                                                                                       aCGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCATGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCg              >  2:1601635/1‑140 (MQ=255)

                                                                                                                        cGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGa             >  2:695197/1‑140 (MQ=255)

                                                                                                                        cGCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGa             >  2:1624085/1‑140 (MQ=255)

                                                                                                                         gCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAg            >  2:1361377/1‑140 (MQ=255)

                                                                                                                         gCCATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAg            >  1:554078/1‑140 (MQ=255)

                                                                                                                           cATGAAAGAGAAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCa          >  2:858860/1‑140 (MQ=255)

                                                                                                                                   agaAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAtcgtc  >  1:1299569/1‑140 (MQ=255)

                                                                                                                                   agaAGCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAtcgtc  <  1:258032/140‑1 (MQ=255)

GGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTC  >  NC_000913/3529224‑3529494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`