BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,825,131	A→G	Y206C (TAT→TGT)	trmH →	tRNA (Gm18) 2'‑O‑methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,825,131	0	A	G	100.0%	437.7 / NA	123	Y206C (TAT→TGT)	trmH	tRNA (Gm18) 2'‑O‑methyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (58/65); total (58/65)

Only 100 of 125 total aligned reads displayed.

GCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTATCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCGCAG  >  NC_000913/3824995‑3825267

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  2:1093302/1‑140 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  2:1226807/1‑140 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  1:182278/1‑140 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  1:1258043/1‑140 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  2:644798/1‑140 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       <  2:1434048/140‑1 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       <  1:644798/140‑1 (MQ=255)

gCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcc                                                                                                                                       >  2:548961/1‑140 (MQ=255)

 cccAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTccc                                                                                                                                      <  1:1226807/140‑1 (MQ=255)

  ccAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTcccc                                                                                                                                     >  1:934170/1‑140 (MQ=255)

     gCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACg                                                                                                                                  <  1:289199/140‑1 (MQ=255)

      cGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGt                                                                                                                                 >  1:929948/1‑140 (MQ=255)

           gCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCaa                                                                                                                              <  2:1559491/138‑1 (MQ=255)

           gCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCaa                                                                                                                              >  1:1559491/1‑138 (MQ=255)

           gCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATc                                                                                                                            >  2:35678/1‑140 (MQ=255)

           gCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATc                                                                                                                            >  2:167355/1‑140 (MQ=255)

           gCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATc                                                                                                                            >  1:1662917/1‑140 (MQ=255)

                 aaaTGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAg                                                                                                                      >  1:697076/1‑140 (MQ=255)

                       aGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCgaga                                                                                                                >  1:1255627/1‑140 (MQ=255)

                         gCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATc                                                                                                              >  2:202420/1‑140 (MQ=255)

                             gTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAg                                                                                                          <  2:713227/140‑1 (MQ=255)

                              tACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCaa                                                                                                                       >  2:97643/1‑126 (MQ=255)

                              tACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGc                                                                                                         >  1:1597936/1‑140 (MQ=255)

                                   gCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATg                                                                                                    >  1:1267664/1‑140 (MQ=255)

                                   gCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATg                                                                                                    >  2:737587/1‑140 (MQ=255)

                                   gCGTAAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATg                                                                                                    >  2:218643/1‑140 (MQ=255)

                                    cGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGc                                                                                                   >  1:1276025/1‑140 (MQ=255)

                                    cGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGc                                                                                                   >  1:812939/1‑140 (MQ=255)

                                     gTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGcc                                                                                                  <  2:934170/140‑1 (MQ=255)

                                      tGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCg                                                                                                 >  2:582205/1‑140 (MQ=255)

                                      tGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCg                                                                                                 >  2:838142/1‑140 (MQ=255)

                                      tGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCg                                                                                                 >  1:1429357/1‑140 (MQ=255)

                                       gAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGa                                                                                                <  2:929948/140‑1 (MQ=255)

                                       gAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGa                                                                                                <  1:582205/140‑1 (MQ=255)

                                        aaaaCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  2:72210/140‑1 (MQ=255)

                                        aaaaCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  1:548961/140‑1 (MQ=255)

                                        aaaaCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  1:838142/140‑1 (MQ=255)

                                        aaaaCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  1:737587/140‑1 (MQ=255)

                                          aaCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtg                                                                                             <  2:427280/140‑1 (MQ=255)

                                           aCAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtgg                                                                                            >  2:247153/1‑140 (MQ=255)

                                            cAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtggt                                                                                           <  2:1633882/140‑1 (MQ=255)

                                             aGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtggtg                                                                                          <  1:1093302/140‑1 (MQ=255)

                                             aGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtggtg                                                                                          <  1:168872/140‑1 (MQ=255)

                                             aGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACtggtg                                                                                          <  1:76775/140‑1 (MQ=255)

                                               cATGTTGCCGGAGGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  1:565270/133‑1 (MQ=255)

                                               cATGTTGCCGGAGGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               >  2:565270/1‑133 (MQ=255)

                                               cATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               <  2:1432100/133‑1 (MQ=255)

                                               cATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGAc                                                                                               >  1:1432100/1‑133 (MQ=255)

                                               cATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTggg                                                                                        <  1:94195/140‑1 (MQ=255)

                                                aTGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGc                                                                                       <  2:812939/140‑1 (MQ=255)

                                                 tGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGct                                                                                      <  1:202420/140‑1 (MQ=255)

                                                  gTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGcta                                                                                     <  1:1508228/140‑1 (MQ=255)

                                                    tGCCGGAAGCAGAGCAATAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGctact                                                                                   <  1:1047245/140‑1 (MQ=255)

                                                     gCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGctacta                                                                                  >  1:515006/1‑140 (MQ=255)

                                                         gAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCa                                                                              <  2:166856/140‑1 (MQ=255)

                                                          aaGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAg                                                                             <  2:270593/140‑1 (MQ=255)

                                                             cAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTggg                                                                                        >  1:596821/1‑126 (MQ=255)

                                                             cAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTggg                                                                                        <  2:596821/126‑1 (MQ=255)

                                                                agCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCa                                                                       >  1:1480713/1‑140 (MQ=255)

                                                                agCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCa                                                                       >  2:915274/1‑140 (MQ=255)

                                                                agCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCa                                                                       <  1:1316203/140‑1 (MQ=255)

                                                                    acaacGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGt                                                                   <  1:247153/140‑1 (MQ=255)

                                                                    acaacGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGt                                                                   <  2:1258043/140‑1 (MQ=255)

                                                                     caacGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTa                                                                  >  2:674415/1‑140 (MQ=255)

                                                                         gCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGt                                                                   <  2:1260391/135‑1 (MQ=255)

                                                                          ccTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCa                                                                              <  2:887205/123‑1 (MQ=255)

                                                                          ccTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCa                                                                              >  1:1022476/1‑123 (MQ=255)

                                                                          ccTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCa                                                                              <  2:1022476/123‑1 (MQ=255)

                                                                             gttgttTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCAt                                                          >  1:1611557/1‑140 (MQ=255)

                                                                                   tGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTaa                                                                 <  2:505768/127‑1 (MQ=255)

                                                                                   tGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTaa                                                                 >  1:505768/1‑127 (MQ=255)

                                                                                      aGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGGAGGCTGCAGGGTAAGTGCCATGAAAGGTCg                                                 <  2:1511562/140‑1 (MQ=255)

                                                                                       ggcggcTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGc                                                <  2:1611557/140‑1 (MQ=255)

                                                                                        gcggcTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGcc                                               >  1:486979/1‑140 (MQ=255)

                                                                                           gcTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGt                                            >  1:868954/1‑140 (MQ=255)

                                                                                           gcTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGt                                            >  2:469362/1‑140 (MQ=255)

                                                                                           gcTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGt                                            >  1:985333/1‑140 (MQ=255)

                                                                                                 cGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATg                                      <  2:985333/140‑1 (MQ=255)

                                                                                                 cGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATg                                      <  1:35678/140‑1 (MQ=255)

                                                                                                    tGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTg                                   <  2:690932/140‑1 (MQ=255)

                                                                                                      cTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCt                                              <  1:1562715/127‑1 (MQ=255)

                                                                                                         gCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCa                              >  1:1074257/1‑140 (MQ=255)

                                                                                                         gCGAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCa                              >  1:273479/1‑140 (MQ=255)

                                                                                                           gAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACt                            <  2:1342156/140‑1 (MQ=255)

                                                                                                           gAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACt                            <  1:49388/140‑1 (MQ=255)

                                                                                                           gAAAGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACt                            <  1:674415/140‑1 (MQ=255)

                                                                                                             aaGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCa                          <  2:1511136/140‑1 (MQ=255)

                                                                                                              aGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACt                            >  2:116433/1‑137 (MQ=255)

                                                                                                              aGTCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACt                            <  1:116433/137‑1 (MQ=255)

                                                                                                                tCGCAAAACGCAAAGGCCTGCCTTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGtt                       >  2:151993/1‑140 (MQ=255)

                                                                                                                                  tgcctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGgcg     >  1:1607379/1‑140 (MQ=255)

                                                                                                                                  tgcctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGgcg     >  1:1427899/1‑140 (MQ=255)

                                                                                                                                  tgcctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGgcg     <  1:218643/140‑1 (MQ=255)

                                                                                                                                  tgcctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGgcg     <  2:1267664/140‑1 (MQ=255)

                                                                                                                                    cctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgca   <  1:915274/140‑1 (MQ=255)

                                                                                                                                     ctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgcag  <  1:151993/140‑1 (MQ=255)

                                                                                                                                     ctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgcag  <  2:1323177/140‑1 (MQ=255)

                                                                                                                                     ctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgcag  <  1:127104/140‑1 (MQ=255)

                                                                                                                                     ctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgcag  <  2:537478/140‑1 (MQ=255)

                                                                                                                                     ctTGTCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCgcag  <  2:486979/140‑1 (MQ=255)

GCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTATCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAAGTGCCATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCGCAG  >  NC_000913/3824995‑3825267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`