BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,923,642	A→G	G13G (GGT→GGC)	rsmG ←	16S rRNA m(7)G527 methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,923,642	0	A	G	100.0%	475.1 / NA	131	G13G (GGT→GGC)	rsmG	16S rRNA m(7)G527 methyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (60/71); total (60/71)

Only 100 of 132 total aligned reads displayed.

AATGCTATCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTT  >  NC_000913/3923507‑3923773

aaTGCTATCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTg                                                                                                                                 <  2:372324/140‑1 (MQ=255)

  tGCTATCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCg                                                                                                                               <  2:339076/140‑1 (MQ=255)

  tGCTATCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCg                                                                                                                               <  2:1638428/140‑1 (MQ=255)

       tCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCttt                                                                                                                          <  1:1225591/140‑1 (MQ=255)

         gagaATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTca                                                                                                                        <  1:971331/140‑1 (MQ=255)

         gagaATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCACCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTca                                                                                                                        <  2:1464490/140‑1 (MQ=255)

          agaATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTcag                                                                                                                       >  2:360078/1‑140 (MQ=255)

            aaTATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTg                                                                                                                                 >  2:939186/1‑128 (MQ=255)

            aaTATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCt                                                                                                                            <  2:1125326/133‑1 (MQ=255)

            aaTATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCt                                                                                                                            >  1:1125326/1‑133 (MQ=255)

              tatGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGt                                                                                                                   >  2:1215908/1‑140 (MQ=255)

              tatGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGt                                                                                                                   <  2:1156065/140‑1 (MQ=255)

               atGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTa                                                                                                                  <  2:478512/140‑1 (MQ=255)

               atGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTa                                                                                                                  <  1:96484/140‑1 (MQ=255)

                tGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTaa                                                                                                                 <  2:1323732/140‑1 (MQ=255)

                 ggCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAg                                                                                                                >  2:1352751/1‑140 (MQ=255)

                   cGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGga                                                                                                              >  1:914410/1‑140 (MQ=255)

                     tACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGgaga                                                                                                            <  1:1611895/140‑1 (MQ=255)

                     tACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGgaga                                                                                                            <  1:479258/140‑1 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGagag                                                                                                           >  1:132497/1‑140 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGagag                                                                                                           >  1:802440/1‑140 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGagag                                                                                                           >  1:385710/1‑140 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGagag                                                                                                           >  2:669084/1‑140 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGACCGGTAAGCGAAATGCCTGCGTCttt                                                                                                                          >  1:1189563/1‑125 (MQ=255)

                      aCCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGACCGGTAAGCGAAATGCCTGCGTCttt                                                                                                                          <  2:1189563/125‑1 (MQ=255)

                        cAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGtt                                                                                                         >  1:1305075/1‑140 (MQ=255)

                         aGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGt                                                                                                          >  2:1314412/1‑138 (MQ=255)

                          gCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTttg                                                                                                       >  1:329197/1‑140 (MQ=255)

                            aTCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTttgtt                                                                                                     <  1:1215908/140‑1 (MQ=255)

                             tctcATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTttgttg                                                                                                    >  2:811474/1‑140 (MQ=255)

                               tcATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAg                                                                                                  <  2:553115/140‑1 (MQ=255)

                               tcATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAg                                                                                                  <  2:501937/140‑1 (MQ=255)

                               tcATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAg                                                                                                  <  1:1127207/140‑1 (MQ=255)

                               tcATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAg                                                                                                  <  2:914410/140‑1 (MQ=255)

                                  ttAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCAc                                                                                               <  2:1047581/140‑1 (MQ=255)

                                   tAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACg                                                                                              <  1:1275391/140‑1 (MQ=255)

                                   tAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACg                                                                                              <  2:1659091/140‑1 (MQ=255)

                                   tAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACg                                                                                              <  1:1352751/140‑1 (MQ=255)

                                    aGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACgg                                                                                             >  2:334870/1‑140 (MQ=255)

                                     ggATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGt                                                                                            >  1:1025947/1‑140 (MQ=255)

                                      gATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTg                                                                                           >  2:1578442/1‑140 (MQ=255)

                                        tCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGAt                                                                                         <  1:195586/140‑1 (MQ=255)

                                         cgcgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGAtt                                                                                        >  1:925056/1‑140 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAGGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTAc                                                                                      >  1:1312880/1‑140 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTttgtt                                                                                                     <  2:845249/125‑1 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTg                                                                                           >  2:1460727/1‑135 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTg                                                                                           <  1:1460727/135‑1 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTAc                                                                                      >  2:1299055/1‑140 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTAc                                                                                      <  2:1305075/140‑1 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTAc                                                                                      >  1:506476/1‑140 (MQ=255)

                                           cgGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTAc                                                                                      >  2:283391/1‑140 (MQ=255)

                                               ccGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCa                                                                                                <  1:70426/126‑1 (MQ=255)

                                               ccGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCa                                                                                                >  2:70426/1‑126 (MQ=255)

                                               ccGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGt                                                                                  <  1:579221/140‑1 (MQ=255)

                                                cGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCa                                                                                                <  2:774990/125‑1 (MQ=255)

                                                cGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCa                                                                                                >  1:774990/1‑125 (MQ=255)

                                                 gAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTc                                                                                >  1:383774/1‑140 (MQ=255)

                                                  aaGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCt                                                                               <  1:1054648/140‑1 (MQ=255)

                                                      cAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGAt                                                                           <  2:802440/140‑1 (MQ=255)

                                                      cAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGAt                                                                           <  1:1224836/140‑1 (MQ=255)

                                                      cAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGAt                                                                           <  2:132497/140‑1 (MQ=255)

                                                       aGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATg                                                                          <  1:1578442/140‑1 (MQ=255)

                                                        ggTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGc                                                                         <  1:1299055/140‑1 (MQ=255)

                                                        ggTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGc                                                                         >  1:1193084/1‑140 (MQ=255)

                                                        ggTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGc                                                                         >  2:1507558/1‑140 (MQ=255)

                                                         gTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCg                                                                        <  1:348231/140‑1 (MQ=255)

                                                         gTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCg                                                                        <  1:1507558/140‑1 (MQ=255)

                                                          ttGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGt                                                                       <  2:1025947/140‑1 (MQ=255)

                                                           tGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGtt                                                                      <  2:1490086/140‑1 (MQ=255)

                                                             tACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGc                                                                    >  1:1531467/1‑140 (MQ=255)

                                                             tACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGc                                                                    >  1:27313/1‑140 (MQ=255)

                                                             tACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGc                                                                    >  2:1436455/1‑140 (MQ=255)

                                                              aCGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGt                                                                       >  1:741076/1‑136 (MQ=255)

                                                              aCGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGcc                                                                   <  2:1260939/140‑1 (MQ=255)

                                                              aCGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGcc                                                                   <  2:27313/140‑1 (MQ=255)

                                                              aCGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGcc                                                                   <  2:565172/140‑1 (MQ=255)

                                                                 cTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTgg                                                                <  2:1193084/140‑1 (MQ=255)

                                                                 cTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTgg                                                                <  1:669084/140‑1 (MQ=255)

                                                                   ttGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTATGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTgg                                                                <  2:936760/138‑1 (MQ=255)

                                                                   ttGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTgg                                                                >  1:936760/1‑138 (MQ=255)

                                                                     gTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAg                                                            <  1:1496557/140‑1 (MQ=255)

                                                                      ttCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGc                                                           <  1:1436455/140‑1 (MQ=255)

                                                                      ttCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCCTGATGCGTTGCCTGGTAAGc                                                           <  2:883701/140‑1 (MQ=255)

                                                                           tttATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTg                                                      <  2:385710/140‑1 (MQ=255)

                                                                           tttATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTg                                                      <  2:679409/140‑1 (MQ=255)

                                                                              aTGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCtt                                                   >  1:1451585/1‑140 (MQ=255)

                                                                                    caTATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCg                                                          <  2:1515555/127‑1 (MQ=255)

                                                                                    caTATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCg                                                          >  1:1515555/1‑127 (MQ=255)

                                                                                    caTATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAgg                                             >  2:1518086/1‑140 (MQ=255)

                                                                                              tAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAAt                                   <  1:1452574/140‑1 (MQ=255)

                                                                                                ggCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGc                                 >  2:472589/1‑140 (MQ=255)

                                                                                                 gCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCg                                <  1:811474/140‑1 (MQ=255)

                                                                                                   aaTAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGtt                              >  1:666421/1‑140 (MQ=255)

                                                                                                    aTAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTa                             <  2:1451585/140‑1 (MQ=255)

                                                                                                           ggTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTa                             <  1:523320/133‑1 (MQ=255)

                                                                                                           ggTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTa                             >  2:523320/1‑133 (MQ=255)

                                                                                                           ggTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTa                      >  1:439432/1‑140 (MQ=255)

                                                                                                           ggTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTa                      <  1:949017/140‑1 (MQ=255)

                                                                                                           ggTTTTTCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTa                      >  2:949017/1‑140 (MQ=255)

                                                                                                                 tCTGGTGATCGGTAAGCGAAATGCCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTacga                   <  1:827039/137‑1 (MQ=255)

AATGCTATCGAGAATATGGCGTACCAGCATCTCATTAGGATCGCGGACCGAAGTCAGGTTGTACGCTTTGTTCCATTTATGCAGCATATTCACGTAGGCAATAAGCTGGTTTTTCTGGTGATCGGTAAGCGAAATACCTGCGTCTTTCAGCAGTAAGGAGAGTTTGTTGAGCACGGTGATTACCTGTTCTTGATGCGTTGCCTGGTAAGCGGGTGCTTACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTT  >  NC_000913/3923507‑3923773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`