Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,347,256 A→G F553L (TTC→CTC)  rnb ← RNase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,347,2560AG100.0% 432.7 / NA 120F553L (TTC→CTC) rnbRNase II
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (53/67);  total (53/67)

Only 100 of 121 total aligned reads displayed.

CGCACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAAGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGACGGTG  >  NC_000913/1347120‑1347391
                                                                                                                                        |                                                                                                                                       
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  2:1578243/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  2:337997/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  1:223140/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  1:344809/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  1:819000/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  1:876595/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  2:379650/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  1:1023942/140‑1 (MQ=255)
cgcACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcg                                                                                                                                      <  2:458444/140‑1 (MQ=255)
  cacaGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcgtg                                                                                                                                    >  1:1478134/1‑140 (MQ=255)
   acaGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcgtgc                                                                                                                                   >  2:63929/1‑140 (MQ=255)
   acaGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGgcgtgc                                                                                                                                   >  1:1459920/1‑140 (MQ=255)
       cGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGtat                                                                                                                               <  2:1159154/140‑1 (MQ=255)
       cGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGtat                                                                                                                               >  1:695910/1‑140 (MQ=255)
          gtAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAAc                                                                                                                            <  2:1603550/140‑1 (MQ=255)
          gtAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAAc                                                                                                                            <  1:621670/140‑1 (MQ=255)
           tAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAAcc                                                                                                                           >  1:995192/1‑140 (MQ=255)
            aaGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCa                                                                                                                          <  2:25129/140‑1 (MQ=255)
               aaaGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCa                                                                                                                          <  2:548752/137‑1 (MQ=255)
               aaaGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCa                                                                                                                          >  1:548752/1‑137 (MQ=255)
                 aGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAAc                                                                                                                            >  1:1076021/1‑133 (MQ=255)
                 aGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCAc                                                                                                                     <  2:321258/140‑1 (MQ=255)
                 aGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCAc                                                                                                                     >  2:350920/1‑140 (MQ=255)
                  ggTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCAcc                                                                                                                    >  2:198733/1‑140 (MQ=255)
                   gTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCa                                                                                                                   <  2:1423244/140‑1 (MQ=255)
                   gTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCa                                                                                                                   >  1:1255384/1‑140 (MQ=255)
                   gTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCa                                                                                                                   >  2:121817/1‑140 (MQ=255)
                   gTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGACTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCa                                                                                                                   >  1:263565/1‑140 (MQ=255)
                      ccGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACa                                                                                                                >  1:1182898/1‑140 (MQ=255)
                          aaTAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCAc                                                                                                            <  1:1111333/140‑1 (MQ=255)
                             aaaGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCAc                                                                                                                     >  2:1305276/1‑128 (MQ=255)
                                   gATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCa                                                                                                   <  2:1200285/140‑1 (MQ=255)
                                    aTAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCAt                                                                                                  >  1:126440/1‑140 (MQ=255)
                                    aTAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCAt                                                                                                  <  1:806163/140‑1 (MQ=255)
                                      aGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATcc                                                                                                >  1:1317169/1‑140 (MQ=255)
                                        cgcCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCgg                                                                                              >  1:1484161/1‑140 (MQ=255)
                                           cGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTg                                                                                           >  2:49307/1‑140 (MQ=255)
                                             ttATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTgag                                                                                         <  1:63929/140‑1 (MQ=255)
                                               aTCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGAc                                                                                       >  2:139193/1‑140 (MQ=255)
                                                   aCCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCg                                                                                   <  2:1255384/140‑1 (MQ=255)
                                                     cAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGAc                                                                                 >  1:1327796/1‑140 (MQ=255)
                                                       aaCGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGc                                                                               >  2:75686/1‑140 (MQ=255)
                                                       aaCGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGc                                                                               >  2:1293097/1‑140 (MQ=255)
                                                          gAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCg                                                                            <  1:1384394/140‑1 (MQ=255)
                                                          gAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCg                                                                            <  2:995192/140‑1 (MQ=255)
                                                          gAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCg                                                                            <  2:482877/140‑1 (MQ=255)
                                                            acacGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGc                                                                          <  1:1293097/140‑1 (MQ=255)
                                                            acacGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGc                                                                          >  1:596159/1‑140 (MQ=255)
                                                                gCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCAtt                                                                      >  2:911009/1‑140 (MQ=255)
                                                                 cATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCAttt                                                                     <  1:49307/140‑1 (MQ=255)
                                                                  aTGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTg                                                                    >  1:1183866/1‑140 (MQ=255)
                                                                     ccgccACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGAc                                                                 <  2:702648/140‑1 (MQ=255)
                                                                     ccgccACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGAc                                                                 <  2:822466/140‑1 (MQ=255)
                                                                      cgccACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACa                                                                >  2:96707/1‑140 (MQ=255)
                                                                       gccACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAg                                                               <  2:596159/140‑1 (MQ=255)
                                                                         cACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTg                                                             <  2:695910/140‑1 (MQ=255)
                                                                          aCGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGa                                                            >  2:1365839/1‑140 (MQ=255)
                                                                             gCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGAttt                                                         <  2:1317169/140‑1 (MQ=255)
                                                                               tGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCa                                                       <  1:1063116/140‑1 (MQ=255)
                                                                               tGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCa                                                       <  2:586305/140‑1 (MQ=255)
                                                                               tGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCa                                                       <  1:1127269/140‑1 (MQ=255)
                                                                                      gACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCtgtg                                                >  1:6893/1‑140 (MQ=255)
                                                                                       aCAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAg                                                               >  2:625257/1‑124 (MQ=255)
                                                                                       aCAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAg                                                               <  1:625257/124‑1 (MQ=255)
                                                                                       aCAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTgg                                               >  2:1451871/1‑140 (MQ=255)
                                                                                        cAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTggg                                              >  2:177641/1‑140 (MQ=255)
                                                                                        cAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTggg                                              >  1:247831/1‑140 (MQ=255)
                                                                                        cAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTggg                                              <  1:1451871/140‑1 (MQ=255)
                                                                                           tttCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCAt                                                      >  2:648655/1‑129 (MQ=255)
                                                                                              ccGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTc                                        >  1:739437/1‑140 (MQ=255)
                                                                                              ccGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTc                                        <  2:739437/140‑1 (MQ=255)
                                                                                               cGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCg                                       <  1:706506/140‑1 (MQ=255)
                                                                                                 cTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCa                                     >  2:444973/1‑140 (MQ=255)
                                                                                                   gCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGt                                   >  2:516233/1‑140 (MQ=255)
                                                                                                       aaCGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCg                               <  2:1182898/140‑1 (MQ=255)
                                                                                                       aaCGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCg                               <  2:272772/140‑1 (MQ=255)
                                                                                                       aaCGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCg                               <  1:1365839/140‑1 (MQ=255)
                                                                                                          gggTGTCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCt                            <  2:1183866/140‑1 (MQ=255)
                                                                                                            gtgtCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCg                               <  1:655038/135‑1 (MQ=255)
                                                                                                              gtCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGa                        >  2:930543/1‑140 (MQ=255)
                                                                                                               tCGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGAt                       >  1:490502/1‑140 (MQ=255)
                                                                                                                cGGTCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATa                      >  2:704220/1‑140 (MQ=255)
                                                                                                                   tCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAAcc                   >  2:389728/1‑140 (MQ=255)
                                                                                                                   tCCCGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAAcc                   <  1:580620/140‑1 (MQ=255)
                                                                                                                    cccGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCg                  >  2:502693/1‑140 (MQ=255)
                                                                                                                      cGGCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCt                >  2:99669/1‑140 (MQ=255)
                                                                                                                       ggCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCtt               <  2:6893/140‑1 (MQ=255)
                                                                                                                       ggCTTTGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCtt               >  1:652798/1‑140 (MQ=255)
                                                                                                                           ttGTCTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTcag           <  1:75686/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTGGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  1:930543/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  1:444973/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  2:873196/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  1:996764/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  1:139193/140‑1 (MQ=255)
                                                                                                                               cTTTCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGa       <  2:1478134/140‑1 (MQ=255)
                                                                                                                                tttCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGCCGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGAc      <  1:177641/140‑1 (MQ=255)
                                                                                                                                tttCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGAc      <  2:671551/140‑1 (MQ=255)
                                                                                                                                tttCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGAc      <  2:1136514/140‑1 (MQ=255)
                                                                                                                                 ttCAGGAGGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGACg     <  1:471304/140‑1 (MQ=255)
                                                                                                                                    aggaggCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGACggtg  <  1:911009/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CGCACAGCGTGTAAGAAAGGTGCCGGAATAAAGGCGATAGCGCCGTTATCAACCAAACGAACACGCATGCCGCCACGGCTGATATCGACAATTTCCGCTGCGAAACGGGTGTCGGTCCCGGCTTTGTCTTTCAGGAAGCGTGCGTATAACCAGTCACCAACATCACGTTCTGCCATCCGGTTGAGACGGCGACGCTCGGCCATTTGGACAGTGATTTCATCCTGTGGGCGCGTCGCAGTTTCGCCTTTGATAACCGCTTTCAGCAGACGGTG  >  NC_000913/1347120‑1347391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: