BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,478,963	C→T	P373S (CCC→TCC)	dsdX →	D‑serine transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,478,963	0	C	T	100.0%	375.9 / NA	104	P373S (CCC→TCC)	dsdX	D‑serine transporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (53/51); total (53/51)

Only 100 of 104 total aligned reads displayed.

CTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGA  >  NC_000913/2478829‑2479099

cTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCAtg                                                                                                                                     >  1:141288/1‑140 (MQ=255)

   aTACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCAtgctg                                                                                                                                  <  2:514371/140‑1 (MQ=255)

     aCGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCACGCTGcc                                                                                                                                >  2:1410217/1‑140 (MQ=255)

       gCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGc                                                                                                                              <  2:180320/140‑1 (MQ=255)

         tGGCAGTAATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTg                                                                                                                            >  2:1636534/1‑140 (MQ=255)

          ggCTGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGt                                                                                                                           <  1:1188521/140‑1 (MQ=255)

          ggCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGt                                                                                                                           <  1:538567/140‑1 (MQ=255)

                      ctcCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCa                                                                                                               <  1:1299449/140‑1 (MQ=255)

                       tcCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCt                                                                                                                             <  2:19071/125‑1 (MQ=255)

                       tcCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCt                                                                                                                             >  1:19071/1‑125 (MQ=255)

                       tcCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAg                                                                                                              >  1:1414238/1‑140 (MQ=255)

                       tcCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAg                                                                                                              >  1:714385/1‑140 (MQ=255)

                                   atgcaCCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAattat                                                                                                  >  2:332756/1‑140 (MQ=255)

                                      caCCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGc                                                                                               >  2:1415286/1‑140 (MQ=255)

                                      caCCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGc                                                                                               >  2:758880/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGccc                                                                                                           >  1:548200/1‑126 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGccc                                                                                                           <  2:548200/126‑1 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  1:759830/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  2:219302/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  1:264254/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  1:209549/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  2:697431/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  2:669949/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  2:445885/1‑140 (MQ=255)

                                        cccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGGTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGa                                                                                             >  2:1490518/1‑140 (MQ=255)

                                         ccGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGAt                                                                                            >  2:1128683/1‑140 (MQ=255)

                                          cGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGAtt                                                                                           >  2:56553/1‑140 (MQ=255)

                                          cGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGAtt                                                                                           >  1:1263190/1‑140 (MQ=255)

                                          cGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGAtt                                                                                           >  1:943984/1‑140 (MQ=255)

                                          cGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGAtt                                                                                           >  1:609495/1‑140 (MQ=255)

                                           gATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTg                                                                                          >  1:679038/1‑140 (MQ=255)

                                           gATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGATGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTg                                                                                          >  2:1033748/1‑140 (MQ=255)

                                            aTTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGc                                                                                         >  2:1316467/1‑140 (MQ=255)

                                            aTTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGc                                                                                         >  2:1292408/1‑140 (MQ=255)

                                             ttcttcTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCt                                                                                        >  2:1033438/1‑140 (MQ=255)

                                               cttctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGTGATTGCTAt                                                                                      <  1:264705/140‑1 (MQ=255)

                                               cttctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTAt                                                                                      <  2:209549/140‑1 (MQ=255)

                                               cttctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTAt                                                                                      <  1:758880/140‑1 (MQ=255)

                                               cttctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTAt                                                                                      <  2:1346969/140‑1 (MQ=255)

                                                ttctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATc                                                                                     <  1:103653/140‑1 (MQ=255)

                                                  ctGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCgg                                                                                   <  2:1414238/140‑1 (MQ=255)

                                                    ggCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGtt                                                                                 <  1:801022/140‑1 (MQ=255)

                                                    ggCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCACGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGtt                                                                                 <  1:1410217/140‑1 (MQ=255)

                                                          gTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTg                                                                           >  1:604511/1‑140 (MQ=255)

                                                          gTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTg                                                                           >  2:1002554/1‑140 (MQ=255)

                                                          gTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTg                                                                           >  2:771289/1‑140 (MQ=255)

                                                          gTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTg                                                                           >  1:644826/1‑140 (MQ=255)

                                                            tAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCa                                                                         <  2:264254/140‑1 (MQ=255)

                                                             aGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGCGCaa                                                                        >  2:1400057/1‑140 (MQ=255)

                                                              gTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAAt                                                                       <  1:771289/140‑1 (MQ=255)

                                                               tGGCTCTTATTCTGCATGCGGCAGTTGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAAtt                                                                      >  1:11917/1‑140 (MQ=255)

                                                               tGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAAtt                                                                      >  2:1644516/1‑140 (MQ=255)

                                                               tGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAAtt                                                                      >  1:1541751/1‑140 (MQ=255)

                                                                ggCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTg                                                                     >  1:1102844/1‑140 (MQ=255)

                                                                 gCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTgg                                                                    <  1:1128683/140‑1 (MQ=255)

                                                                   tctTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCt                                                                  <  2:714385/140‑1 (MQ=255)

                                                                    ctTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTg                                                                 >  1:905239/1‑140 (MQ=255)

                                                                     ttATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGc                                                                <  1:1033748/140‑1 (MQ=255)

                                                                     ttATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGc                                                                <  1:1644516/140‑1 (MQ=255)

                                                                     ttATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGc                                                                <  1:697431/140‑1 (MQ=255)

                                                                        ttCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACt                                                             <  2:308351/140‑1 (MQ=255)

                                                                             cATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGt                                                        >  2:420660/1‑140 (MQ=255)

                                                                             cATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGt                                                        >  1:1389726/1‑140 (MQ=255)

                                                                               tGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTa                                                      <  1:1490518/140‑1 (MQ=255)

                                                                               tGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTa                                                      <  2:1102844/140‑1 (MQ=255)

                                                                               tGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTa                                                      <  1:669949/140‑1 (MQ=255)

                                                                               tGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTa                                                      >  2:784345/1‑140 (MQ=255)

                                                                                  ggCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACgg                                                   <  1:203799/140‑1 (MQ=255)

                                                                                  ggCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACgg                                                   >  2:203799/1‑140 (MQ=255)

                                                                                      gTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTc                                               <  2:118639/140‑1 (MQ=255)

                                                                                       ttggCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCg                                              <  2:11917/138‑1 (MQ=255)

                                                                                       tGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCg                                              <  2:1541751/140‑1 (MQ=255)

                                                                                       tGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCg                                              <  1:1636534/140‑1 (MQ=255)

                                                                                               gCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTg                                      <  2:759830/140‑1 (MQ=255)

                                                                                                cTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGTTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTgg                                     <  1:1388434/140‑1 (MQ=255)

                                                                                                 tACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGc                                    <  2:905239/140‑1 (MQ=255)

                                                                                                   ccGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTa                                  >  2:304740/1‑140 (MQ=255)

                                                                                                    cGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAg                                 <  1:420660/140‑1 (MQ=255)

                                                                                                    cGTGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAg                                 <  2:644826/140‑1 (MQ=255)

                                                                                                      tGGCAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTg                               >  1:1280159/1‑140 (MQ=255)

                                                                                                         cAATGATGGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAg                            <  1:445885/140‑1 (MQ=255)

                                                                                                           atgatgGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTgg                                     >  2:866143/1‑129 (MQ=255)

                                                                                                           atgatgGGGGCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTgg                                     <  1:866143/129‑1 (MQ=255)

                                                                                                                   ggCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcg                  <  2:217104/140‑1 (MQ=255)

                                                                                                                   ggCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcg                  <  1:784345/140‑1 (MQ=255)

                                                                                                                    gCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcg                  >  1:182123/1‑139 (MQ=255)

                                                                                                                    gCAACGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcg                  <  2:182123/139‑1 (MQ=255)

                                                                                                                      aaCGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcggcg               >  2:736641/1‑140 (MQ=255)

                                                                                                                      aaCGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTgcggcg               >  1:322706/1‑140 (MQ=255)

                                                                                                                        cGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGgcgc              >  2:319633/1‑139 (MQ=255)

                                                                                                                        cGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGgcgc              <  1:319633/139‑1 (MQ=255)

                                                                                                                        cGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCt             >  1:1117672/1‑140 (MQ=255)

                                                                                                                        cGGCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGCGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCt             <  1:1400057/140‑1 (MQ=255)

                                                                                                                         ggCAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTa            <  2:322706/140‑1 (MQ=255)

                                                                                                                           cAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACg          <  2:609495/140‑1 (MQ=255)

                                                                                                                           cAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACg          <  1:1002554/140‑1 (MQ=255)

                                                                                                                           cAATTGTTGCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACg          <  2:943984/140‑1 (MQ=255)

                                                                                                                               tgttgCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCa      >  1:383584/1‑140 (MQ=255)

                                                                                                                                  tgCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATg   >  2:426483/1‑140 (MQ=255)

                                                                                                                                   gCATCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGa  <  2:383584/140‑1 (MQ=255)

CTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGA  >  NC_000913/2478829‑2479099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`