| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,192,444 | (T)7→8 | coding (237/630 nt) | yqiJ → | putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,192,437 | 1 | . | T | 98.8% | 280.8 / ‑3.8 | 81 | coding (230/630 nt) | yqiJ | putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (44/36); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.30e-01 | |||||||||||
ACATGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTAAA > NC_000913/3192305‑3192567 | acaTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑ttttttt > 1:117602/1‑140 (MQ=255)acaTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑ttttttt < 2:117602/140‑1 (MQ=255) caTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTTAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑tttttttt < 1:399682/140‑2 (MQ=255) aTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑ttttttttg < 2:846723/140‑3 (MQ=255) aTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑ttttttttg > 2:292969/1‑138 (MQ=255) aTGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑ttttttttg < 1:451092/140‑3 (MQ=255) tcCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTa > 2:683610/1‑140 (MQ=255) gCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCa < 2:627778/140‑1 (MQ=255) ctctTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGTACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑TTTTTTTGGTCTTATTGGCATc < 2:469426/140‑1 (MQ=255) tctTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGATCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATc < 2:829649/140‑1 (MQ=255) tctTGATGCACATCTTCACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATc < 1:779141/140‑1 (MQ=255) ttGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCt > 2:293740/1‑140 (MQ=255) gATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGt < 2:374675/140‑1 (MQ=255) gCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTgc > 2:585574/1‑140 (MQ=255) acaTCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTgcag > 2:110464/1‑140 (MQ=255) aTCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTgcagca < 1:335826/140‑1 (MQ=255) aTCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTgcagca > 1:399907/1‑140 (MQ=255) ttGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGc < 1:592825/140‑1 (MQ=255) aCCATTATGATTCTATAACCACAGGTCACATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTg > 2:688276/1‑140 (MQ=255) ccATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGc > 2:249235/1‑140 (MQ=255) ttATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatc > 2:330628/1‑140 (MQ=255) tATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca < 1:110464/140‑1 (MQ=255) tATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca < 1:683610/140‑1 (MQ=255) aTGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca < 1:742740/139‑1 (MQ=255) aTGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca > 2:742740/1‑139 (MQ=255) tCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca > 2:541613/1‑134 (MQ=255) tCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatca < 1:541613/134‑1 (MQ=255) cTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTg < 2:331813/140‑1 (MQ=255) cTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTg < 1:73243/140‑1 (MQ=255) aGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATcacca > 2:340379/1‑140 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatcat < 1:324897/123‑1 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGcatcat > 2:324897/1‑123 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCGTCATGGTCTGGCAATcaccac > 2:789373/1‑140 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATcaccac > 1:277289/1‑140 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATcaccac > 2:772887/1‑140 (MQ=255) ggTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATcaccac > 2:825932/1‑140 (MQ=255) atatTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTc > 1:734441/1‑140 (MQ=255) atTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGa > 1:769003/1‑140 (MQ=255) ccAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTg > 2:369065/1‑140 (MQ=255) ccAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTg > 2:19055/1‑140 (MQ=255) ccAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTg > 2:183215/1‑140 (MQ=255) ccAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTg > 2:840317/1‑140 (MQ=255) ccAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTg > 2:166560/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCg > 2:677223/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCg > 2:337066/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCg > 1:340018/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCg > 2:660505/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCg > 1:503853/1‑140 (MQ=255) gCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCAAGGTCTGGCAATCACCACTGTCGAACCTGTTCg < 1:517553/140‑1 (MQ=255) cTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTgg < 1:677223/140‑1 (MQ=255) aTTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTcc < 1:789373/140‑1 (MQ=255) aTTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTcc < 1:249235/140‑1 (MQ=255) tATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTg < 1:292969/140‑1 (MQ=255) tATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTg < 1:166560/140‑1 (MQ=255) aTCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt < 1:840317/140‑1 (MQ=255) aTCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt < 1:660505/140‑1 (MQ=255) aTCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt < 1:340379/140‑1 (MQ=255) aTCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt < 1:369065/140‑1 (MQ=255) cAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt > 2:284933/1‑136 (MQ=255) cAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGt < 1:284933/136‑1 (MQ=255) cAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGt > 1:686941/1‑140 (MQ=255) cAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGt > 1:39500/1‑140 (MQ=255) atatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGttt > 2:30087/1‑140 (MQ=255) atatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGttt > 2:365736/1‑140 (MQ=255) atatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGttt > 1:175516/1‑140 (MQ=255) tatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTa < 2:343056/140‑1 (MQ=255) tatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTa > 1:73707/1‑140 (MQ=255) tatTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTa < 2:460005/140‑1 (MQ=255) tGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTg < 1:72880/140‑1 (MQ=255) ggAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGTTTTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTg > 1:687894/1‑140 (MQ=255) gAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGtt < 1:337066/140‑1 (MQ=255) gAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGtt > 1:435062/1‑140 (MQ=255) gATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTAc < 2:318135/140‑1 (MQ=255) ttGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGtt < 1:421269/128‑1 (MQ=255) ttGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGtt > 2:421269/1‑128 (MQ=255) ttGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGa > 1:192009/1‑140 (MQ=255) gCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGatt > 2:509712/1‑140 (MQ=255) ccAGCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGatta > 1:433372/1‑140 (MQ=255) gCTCTCGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTg < 1:354120/140‑1 (MQ=255) ctctCGTCGTTCTCTGCTTACTGGCTGGTTTTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTg < 2:687894/140‑1 (MQ=255) tctcGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCg < 1:825932/140‑1 (MQ=255) ctcGTCGTTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCgg < 2:277289/140‑1 (MQ=255) cgtcgtTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTg < 2:686941/140‑1 (MQ=255) tcgtTCTCTGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCa < 1:183215/140‑1 (MQ=255) ctGCTTACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATAcc > 1:589623/1‑140 (MQ=255) ttACTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCCGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTa > 1:168596/1‑140 (MQ=255) aCTGGCTGGT‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTaaa > 1:795868/1‑140 (MQ=255) | ACATGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGG‑‑TTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTAAA > NC_000913/3192305‑3192567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |