| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,884,093 | (C)6→7 | coding (46/1509 nt) | casA ← | type I‑E CRISPR system Cascade subunit CasA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,884,087 | 1 | . | C | 94.2% | 229.5 / 5.5 | 69 | coding (52/1509 nt) | casA | type I‑E CRISPR system Cascade subunit CasA |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (41/24); total (43/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑CCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAGAAAA > NC_000913/2883956‑2884220 | tGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑cccccccg > 2:905892/1‑138 (MQ=255) ccGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑cccccccgtt > 1:1098418/1‑136 (MQ=255) cGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑cccccccgttt < 2:237781/140‑6 (MQ=255) gggCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTcg > 1:643936/1‑140 (MQ=255) gggCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTcg < 1:522202/140‑1 (MQ=255) ggCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTcgc > 1:459395/1‑140 (MQ=255) cGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCgg < 2:324887/140‑1 (MQ=255) cGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCgg < 1:279017/140‑1 (MQ=255) cGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCgg < 1:374219/140‑1 (MQ=255) cGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCgg < 1:1073557/140‑1 (MQ=255) aTAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAATCTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑CCCCCCGTTTCGCGGGCg > 2:1084165/1‑140 (MQ=255) tAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCg < 1:973750/140‑1 (MQ=255) gCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAgg > 2:122676/1‑140 (MQ=255) aaTGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATc < 1:122676/140‑1 (MQ=255) aaTGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATc < 1:682805/140‑1 (MQ=255) cagTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAggg < 2:549132/125‑1 (MQ=255) cagTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAggg > 1:549132/1‑125 (MQ=255) cagTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATa > 1:1129574/1‑140 (MQ=255) cGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCAt < 2:916446/140‑1 (MQ=255) gCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCaaa > 2:716651/1‑133 (MQ=255) gCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCaaa < 1:716651/133‑1 (MQ=255) gCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCAttt > 2:258603/1‑140 (MQ=255) ggTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGtt < 1:753469/139‑1 (MQ=255) ccATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTcc < 2:98612/140‑1 (MQ=255) tatCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTc > 1:719363/1‑140 (MQ=255) tatCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTc > 1:1212143/1‑140 (MQ=255) tCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTC‑CCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCata < 2:396473/140‑1 (MQ=255) aCGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCt > 2:779271/1‑140 (MQ=255) aCTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACAttt > 1:305073/1‑140 (MQ=255) tCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGGCATTTCTCCTg < 2:52247/140‑1 (MQ=255) tCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTg < 1:79513/140‑1 (MQ=255) tCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTg < 2:512729/140‑1 (MQ=255) cGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGc < 2:1098418/140‑1 (MQ=255) cGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGc > 2:750143/1‑140 (MQ=255) ccACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCAt < 2:719363/140‑1 (MQ=255) cTGATCTCTACTGCAGTATAGCGATTGCAGATATATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTc > 2:86113/1‑140 (MQ=255) ctctACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATAc > 1:819664/1‑140 (MQ=255) tACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTc > 1:1078543/1‑140 (MQ=255) aCTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑CCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCgg < 1:1084165/140‑1 (MQ=255) cTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCgg < 2:459395/140‑1 (MQ=255) cTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCgg < 2:1078194/140‑1 (MQ=255) cAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGcac > 2:957655/1‑140 (MQ=255) cAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGcac > 2:506012/1‑140 (MQ=255) cAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGca > 2:947935/1‑139 (MQ=255) cAGTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTATTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGca < 1:947935/139‑1 (MQ=255) gTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCacac > 2:784071/1‑140 (MQ=255) gTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCacac > 1:189182/1‑140 (MQ=255) gTATAGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCacac > 2:972105/1‑140 (MQ=255) tataGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACt > 2:416775/1‑140 (MQ=255) taGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTc > 2:963717/1‑140 (MQ=255) taGCGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTc > 2:263111/1‑140 (MQ=255) cGATTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGCTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGt > 2:965318/1‑140 (MQ=255) aTTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCacac < 1:908164/132‑1 (MQ=255) aTTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCacac > 2:908164/1‑132 (MQ=255) aTTGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTa > 2:282103/1‑140 (MQ=255) aTTGCAGATTTATGATTTGGACTTT‑CCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTAt > 1:573347/1‑140 (MQ=255) ttGCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTAt > 1:360836/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGcac < 2:337870/127‑1 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGcac > 1:337870/1‑127 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 1:618601/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 1:504362/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 1:934628/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 1:491438/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 2:106702/1‑140 (MQ=255) gCAGATTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCg > 1:213358/1‑140 (MQ=255) aTTTATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTaa > 1:1078925/1‑140 (MQ=255) ttATGATTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTaaaa > 2:414251/1‑140 (MQ=255) aTTTGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACaaa > 2:1115194/1‑140 (MQ=255) tttGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAg < 2:643936/140‑1 (MQ=255) tGGACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAGaa > 2:496980/1‑140 (MQ=255) gACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAGaaaa > 1:372774/1‑140 (MQ=255) gACTTTCCCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAGaaaa > 2:416894/1‑140 (MQ=255) | TGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAATCGCCACTGATCTCTACTGCAGTATAGCGATTGCAGATTTATGATTTGGACTTT‑CCCCCCGTTTCGCGGGCGTACAGGGATCCAGTTATCAATAAGCAAATTCATTTGTTCTCCTTCATATGCTCCGACATTTCTCCTGCATTTCTATACGTCGGCACACTTCCGTTATCGGTAAAAACAAAGAAAA > NC_000913/2883956‑2884220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |