Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,801,399	A→G	L201L (TTG→CTG)	waaJ ←	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,801,399	0	A	G	100.0%	345.7 / NA	97	L201L (TTG→CTG)	waaJ	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (57/40);  total (57/40)

TTTTAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCT  >  NC_000913/3801265‑3801532                                                                                                                                       |                                                                                                                                      ttttAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCtt                                                                                                                                  <  1:78283/140‑1 (MQ=255)  tttAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCttt                                                                                                                                 <  2:1002136/140‑1 (MQ=255)        tCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGt                                                                                                                           <  1:87723/140‑1 (MQ=255)         cACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGtt                                                                                                                          >  2:527738/1‑140 (MQ=255)           cTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAg                                                                                                                        >  1:1212273/1‑140 (MQ=255)             tttAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGtt                                                                                                                      >  1:547743/1‑140 (MQ=255)                  ttGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCg                                                                                                                 <  1:609734/140‑1 (MQ=255)                           ttgtattgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCAt                                                                                                        <  1:536733/140‑1 (MQ=255)                               attgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCAttttt                                                                                                    >  1:1159783/1‑140 (MQ=255)                               attgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCAttttt                                                                                                    >  1:909600/1‑140 (MQ=255)                                   taCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTaa                                                                                                >  2:137780/1‑140 (MQ=255)                                   taCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTaa                                                                                                >  1:883757/1‑140 (MQ=255)                                   taCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTaa                                                                                                >  1:128409/1‑140 (MQ=255)                                    aCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGGCATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAg                                                                                               >  2:521732/1‑140 (MQ=255)                                    aCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAg                                                                                               <  1:264454/140‑1 (MQ=255)                                     cTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGt                                                                                              >  2:1132287/1‑140 (MQ=255)                                     cTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTGATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGt                                                                                              >  2:1067922/1‑140 (MQ=255)                                        aCGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCAtttttt                                                                                                   >  1:904944/1‑132 (MQ=255)                                        aCGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCAtttttt                                                                                                   <  2:904944/132‑1 (MQ=255)                                        aCGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCta                                                                                           >  1:218507/1‑140 (MQ=255)                                           aGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCtaaat                                                                                        >  2:309812/1‑140 (MQ=255)                                             gCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCtaaataa                                                                                      >  1:515403/1‑140 (MQ=255)                                             gCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCtaaataa                                                                                      >  2:1125415/1‑140 (MQ=255)                                              cAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCtaaataaa                                                                                     <  2:128409/140‑1 (MQ=255)                                               aaaaaTAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAAc                                                                                    >  1:584096/1‑140 (MQ=255)                                                    taatGTCATCCCTTTCAGTAAGGCATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGacac                                                                               <  1:521732/140‑1 (MQ=255)                                                    taatGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGacac                                                                               <  2:1109337/140‑1 (MQ=255)                                                     aatGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACAcc                                                                              <  2:547743/140‑1 (MQ=255)                                                       tGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCgg                                                                            <  1:458920/140‑1 (MQ=255)                                                        gTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGa                                                                           >  1:1094259/1‑140 (MQ=255)                                                           aTCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAAtt                                                                        >  2:511016/1‑140 (MQ=255)                                                           aTCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAAtt                                                                        >  2:549576/1‑140 (MQ=255)                                                           aTCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTCTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACAcc                                                                              >  1:932354/1‑134 (MQ=255)                                                           aTCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTCTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACAcc                                                                              <  2:932354/134‑1 (MQ=255)                                                            tCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTa                                                                       >  1:1054845/1‑140 (MQ=255)                                                            tCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTa                                                                       >  2:163686/1‑140 (MQ=255)                                                             cccTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTaa                                                                      >  2:548007/1‑140 (MQ=255)                                                                 ttCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTa                                                                  >  2:114473/1‑140 (MQ=255)                                                                 ttCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTa                                                                  <  1:865597/140‑1 (MQ=255)                                                                     gTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGc                                                              <  1:208941/140‑1 (MQ=255)                                                                        aGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCa                                                           >  2:780418/1‑140 (MQ=255)                                                                         gACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCaa                                                          <  2:1159783/140‑1 (MQ=255)                                                                         gACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCaa                                                          <  1:548007/140‑1 (MQ=255)                                                                         gACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCaa                                                          >  2:246967/1‑140 (MQ=255)                                                                          aCATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAg                                                         >  1:75106/1‑140 (MQ=255)                                                                          aCATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAg                                                         <  2:176529/140‑1 (MQ=255)                                                                           cATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGt                                                        <  2:1016025/140‑1 (MQ=255)                                                                                  aaCATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAg                                                 >  1:95294/1‑140 (MQ=255)                                                                                  aaCATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAg                                                 <  2:842356/140‑1 (MQ=255)                                                                                    cATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGa                                               <  1:137780/140‑1 (MQ=255)                                                                                    cATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGa                                               >  2:1176297/1‑140 (MQ=255)                                                                                    cATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCA‑TTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGAt                                              >  1:554254/1‑140 (MQ=255)                                                                                     aTCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGAt                                              <  2:883757/140‑1 (MQ=255)                                                                                      tCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATc                                             >  1:201086/1‑140 (MQ=255)                                                                                       ccTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCa                                            >  2:874724/1‑140 (MQ=255)                                                                                        cTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAg                                           <  2:552462/140‑1 (MQ=255)                                                                                         tGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGa                                          >  1:1040210/1‑140 (MQ=255)                                                                                          gATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGAc                                         <  1:549576/140‑1 (MQ=255)                                                                                          gATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGAc                                         >  2:580498/1‑140 (MQ=255)                                                                                          gATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGAc                                         >  2:527603/1‑140 (MQ=255)                                                                                          gATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGAc                                         <  1:527738/140‑1 (MQ=255)                                                                                          gATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGAc                                         >  2:123506/1‑140 (MQ=255)                                                                                           aTCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACa                                        >  1:475346/1‑140 (MQ=255)                                                                                           aTCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGCCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAGAGCACTGCCCAAGTAATTCAGGATCAAACa                                        >  2:744820/1‑140 (MQ=255)                                                                                              aGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAAcc                                     <  1:780418/140‑1 (MQ=255)                                                                                               gggTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCt                                    >  1:473176/1‑140 (MQ=255)                                                                                                ggTATTTATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTg                                   >  1:614327/1‑140 (MQ=255)                                                                                                     ttATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAg                                           <  2:895630/127‑1 (MQ=255)                                                                                                     ttATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAg                                           >  1:895630/1‑127 (MQ=255)                                                                                                     ttATAAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATAc                              >  1:72468/1‑140 (MQ=255)                                                                                                        taAACATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGc                           <  2:210509/140‑1 (MQ=255)                                                                                                         aaaCATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGcc                          <  2:614327/140‑1 (MQ=255)                                                                                                          aaCATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCt                         <  1:580498/140‑1 (MQ=255)                                                                                                            cATTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCttt                       >  1:521774/1‑140 (MQ=255)                                                                                                             aTTATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGAGCAGACAACCTGGATACCGCCtttt                      <  1:1176297/140‑1 (MQ=255)                                                                                                              ttATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTc                     <  2:584096/140‑1 (MQ=255)                                                                                                              ttATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCA‑TTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCt                    <  2:554254/140‑1 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATCGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTACAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGa                                 <  2:1074910/127‑1 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGa                                 >  1:1074910/1‑127 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGcc                          >  1:157842/1‑134 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGcc                          <  2:157842/134‑1 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCt                    >  2:239937/1‑140 (MQ=255)                                                                                                               tATCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCt                    >  1:99678/1‑140 (MQ=255)                                                                                                                aTCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCtt                   >  2:746494/1‑140 (MQ=255)                                                                                                                 tCTTTACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTg                  >  1:515023/1‑140 (MQ=255)                                                                                                                   tttACTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGTGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCa                >  2:1125206/1‑140 (MQ=255)                                                                                                                      aCTCATAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTg             >  2:988611/1‑140 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCt                    >  2:641261/1‑128 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCt                    <  1:641261/128‑1 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCa        <  2:692906/140‑1 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCa        <  1:999554/140‑1 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCa        >  2:190135/1‑140 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCa        >  2:1136813/1‑140 (MQ=255)                                                                                                                           tAAGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCa        <  2:1094259/140‑1 (MQ=255)                                                                                                                             aGAATAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAAc      <  2:1040210/140‑1 (MQ=255)                                                                                                                                 tAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCt  >  1:429257/1‑140 (MQ=255)                                                                                                                                 tAGACAGCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCt  >  2:761110/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                      TTTTAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCT  >  NC_000913/3801265‑3801532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑