New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 899694	NA (NA)	3 (0.110)	3/248	3.3	NA	intergenic (+49/+150)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase/L‑arginine ABC transporter periplasmic binding protein
	?	NC_000913	= 900783	NA (NA)					noncoding (1/34 nt)	other	REP83a
Rejected: Coverage evenness skew score above cutoff.

CCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTAtgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/899556‑899694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACAACCCACTAAGTTGTCCGTCTTTTTTATTTCATTTAAATTATTTAATCATGTTTATTGCATATAAATTCACTTGATGG  <  NC_000913/900783‑900639                                                                                                                                                                                                                                                                                              CCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTAT                                                                                                                                                  >  1:179641/1‑140         TCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATG                                                                                                                                          >  1:521584/1‑140            TATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGG                                                                                                                                       >  1:148119/1‑140                                                                    TGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACA                                                                               <  1:454782/140‑1                                                                    TGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACA                                                                               >  2:454782/1‑140                                                                                                                             AGTGCGCGTTGTTTATGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACAACCCACTAAGTTGTCCGTCTTTTTTATTTCATTTAAATTATTTAATCATGTTTATTG                      <  2:491976/140‑1                                                                                                                                                GGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCCTAAATTCTTTTAATGAAAACGGGCAACCCACTAAGTTGTCCGTCTTTTTTTTTTTTTTTAAATTATTTAATCATGTTTATTTCATATAAATTCACTTTATG   >  2:92839/1‑140                                                                                                                                                GGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACAACCCACTAAGTTGTCCGTCTTTTTTATTTCATTTAAATTATTTAATCATGTTTATTGCATATAAATTCACTTGATG   <  1:393614/140‑1                                                                                                                                                 GATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACAACCCACTAAGTTGTCCGTCTTTTTTATTTCATTTAAATTATTTAATCATGTTTATTGCATATAAATTCACTTGATGG  <  2:138531/140‑1                                                                                                                                                                                                                                                                                              CCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTAtgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/899556‑899694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACATAGTGCATAAATTCTTATAATGAAGACGGACAACCCACTAAGTTGTCCGTCTTTTTTATTTCATTTAAATTATTTAATCATGTTTATTGCATATAAATTCACTTGATGG  <  NC_000913/900783‑900639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.