Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,609,314 A→G V456A (GTG→GCG)  uxaB ← tagaturonate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,609,3140AG100.0% 212.0 / NA 58V456A (GTG→GCG) uxaBtagaturonate reductase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (25/33);  total (25/33)

GGTGAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCACTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCATCGTCCT  >  NC_000913/1609180‑1609446
                                                                                                                                      |                                                                                                                                    
ggTGAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGc                                                                                                                                 >  1:369643/1‑140 (MQ=255)
  tGAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGt                                                                                                                               >  2:343290/1‑140 (MQ=255)
   gAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTc                                                                                                                              <  1:332816/140‑1 (MQ=255)
   gAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTc                                                                                                                              <  1:16872/140‑1 (MQ=255)
   gAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTc                                                                                                                              <  2:526548/140‑1 (MQ=255)
    aaaTAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGt                                                                                                                               <  2:232079/138‑1 (MQ=255)
    aaaTAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGt                                                                                                                               >  1:232079/1‑138 (MQ=255)
    aaaTAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCa                                                                                                                             >  2:472698/1‑140 (MQ=255)
      aTAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAgg                                                                                                                           >  1:133666/1‑140 (MQ=255)
       tAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGt                                                                                                                          <  2:369643/140‑1 (MQ=255)
           aaaCCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTg                                                                                                                      >  2:299632/1‑140 (MQ=255)
            aaCCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCg                                                                                                                                <  1:298783/129‑1 (MQ=255)
            aaCCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCg                                                                                                                                >  2:298783/1‑129 (MQ=255)
              cccGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTc                                                                                                                   >  2:282380/1‑140 (MQ=255)
                  gTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAg                                                                                                               >  2:123043/1‑140 (MQ=255)
                            ggTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCttttt                                                                                                     <  1:472698/140‑1 (MQ=255)
                             gTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTc                                                                                                    >  2:216781/1‑140 (MQ=255)
                                 aGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGcc                                                                                                >  1:321025/1‑140 (MQ=255)
                                           gtgtTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCg                                                                                      <  1:415188/140‑1 (MQ=255)
                                           gtgtTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCg                                                                                      <  1:276124/140‑1 (MQ=255)
                                               tattaGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTAc                                                                                  <  1:123043/140‑1 (MQ=255)
                                                attaGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTAcc                                                                                 <  1:282380/140‑1 (MQ=255)
                                                    gCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTAc                                                                                  <  2:15153/135‑1 (MQ=255)
                                                    gCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTAc                                                                                  >  1:15153/1‑135 (MQ=255)
                                                      acaACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTcc                                                                           <  1:166644/140‑1 (MQ=255)
                                                      acaACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTcc                                                                           >  2:166644/1‑140 (MQ=255)
                                                        aaCGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTg                                                                         >  2:490333/1‑140 (MQ=255)
                                                         aCGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTgg                                                                        <  2:348430/140‑1 (MQ=255)
                                                          cGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTggg                                                                       >  2:391821/1‑140 (MQ=255)
                                                          cGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTggg                                                                       >  1:18855/1‑140 (MQ=255)
                                                           ggACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGt                                                                      <  2:196669/140‑1 (MQ=255)
                                                             aCGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTggg                                                                       <  2:208618/137‑1 (MQ=255)
                                                             aCGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTCTCTGCCAAAACAATCGCTACCAGTTCCTggg                                                                       >  1:208618/1‑137 (MQ=255)
                                                                   aGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATaa                                                              <  1:343290/140‑1 (MQ=255)
                                                                   aGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATaa                                                              <  1:299632/140‑1 (MQ=255)
                                                                             aTCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACg                                                    >  1:61319/1‑140 (MQ=255)
                                                                                 cTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGc                                                <  2:321025/140‑1 (MQ=255)
                                                                                     ttCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGc                                            >  2:86218/1‑140 (MQ=255)
                                                                                     ttCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGc                                            <  1:143483/140‑1 (MQ=255)
                                                                                       cGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTc                                          <  2:133666/140‑1 (MQ=255)
                                                                                         agaATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATg                                                 <  2:418551/131‑1 (MQ=255)
                                                                                         agaATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATg                                                 >  1:418551/1‑131 (MQ=255)
                                                                                          gaATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCag                                       >  1:533642/1‑140 (MQ=255)
                                                                                              cGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGtt                                   <  2:18855/140‑1 (MQ=255)
                                                                                                          aTTAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGtt                       <  2:61319/140‑1 (MQ=255)
                                                                                                            tAGCAACCTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTcc                     <  1:442860/140‑1 (MQ=255)
                                                                                                                   cTGCTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAgt              <  2:533642/140‑1 (MQ=255)
                                                                                                                      cTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTccagccag               <  1:192416/136‑1 (MQ=255)
                                                                                                                      cTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTccagccag               >  2:192416/1‑136 (MQ=255)
                                                                                                                      cTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGtgtg           >  1:499865/1‑140 (MQ=255)
                                                                                                                      cTCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGtgtg           >  1:479374/1‑140 (MQ=255)
                                                                                                                       tCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTccagc                  >  2:317318/1‑132 (MQ=255)
                                                                                                                       tCGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTccagc                  <  1:317318/132‑1 (MQ=255)
                                                                                                                        cGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAgtgttca         <  1:391821/140‑4 (MQ=255)
                                                                                                                        cGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCa         <  1:513584/140‑1 (MQ=255)
                                                                                                                        cGACCAGACCAGGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCa         <  1:86218/140‑1 (MQ=255)
                                                                                                                             agaccagGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCATCGTc    <  1:216781/140‑1 (MQ=255)
                                                                                                                              gaccagGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTAACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCATCGTcc   <  1:490333/140‑1 (MQ=255)
                                                                                                                               accagGCGCTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCATCGTCCt  <  2:479374/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                    
GGTGAAATAAGAAACCCGGTCGAAACCGGGTTCAGAAGTAACGGTGTTATTAGCACAACGGACGTACAGCTTCGCGCATCCCTTTTTCGAGAATCGCATCCAGGTCATTAGCAACCTGCTCGACCAGACCAGGCACTTGCGTCAGGTCCTGCTCCCAGTGGTCTTTTTCTGCCAAAACAATCGCTACCAGTTCCTGGGTGCCGATAACACGGTCACGATGCTGGCTCCAGAGTTGCTGATAACGTTCCAGCCAGTGTGCATCGTCCT  >  NC_000913/1609180‑1609446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: