BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,128,145	(T)_8→7	intergenic (‑124/‑127)	glcD ← / → glcC	glycolate dehydrogenase, putative FAD‑linked subunit/DNA‑binding transcriptional dual regulator GlcC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,128,138	0	T	.	100.0%	397.6 / NA	94	intergenic (‑117/‑134)	glcD/glcC	glycolate dehydrogenase, putative FAD‑linked subunit/DNA‑binding transcriptional dual regulator GlcC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (46/48); total (46/48)

Only 100 of 101 total aligned reads displayed.

GTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTCCGG  >  NC_000913/3128007‑3128269

gTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGG‑‑GCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttccag                                                                                                                           >  2:436712/1‑136 (MQ=255)

  aCAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttccag                                                                                                                           <  2:826598/140‑5 (MQ=255)

       aTGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtg                                                                                                                     <  1:504816/140‑1 (MQ=255)

       aTGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtg                                                                                                                     <  2:619304/140‑1 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  2:239235/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  1:288459/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  2:202744/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  1:1123319/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  2:818124/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgtg                                                                                                                   >  2:248067/1‑140 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtg                                                                                                                     >  2:556646/1‑138 (MQ=255)

         gCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtg                                                                                                                     <  1:556646/138‑1 (MQ=255)

           tCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGctct                                                                                                                      <  2:638534/135‑1 (MQ=255)

           tCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGctct                                                                                                                      >  1:638534/1‑135 (MQ=255)

           tCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGAc                                                                                                                 <  2:288459/140‑1 (MQ=255)

           tCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGAc                                                                                                                 <  1:1232297/140‑1 (MQ=255)

            cATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGAcc                                                                                                                <  1:248067/140‑1 (MQ=255)

            cATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGAcc                                                                                                                <  2:42395/140‑1 (MQ=255)

            cATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGAcc                                                                                                                <  1:55423/140‑1 (MQ=255)

              tGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCtt                                                                                                              >  2:1103555/1‑140 (MQ=255)

                aGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttcc                                                                                                                             <  1:150535/124‑3 (MQ=255)

                aGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttcc                                                                                                                             >  2:150535/1‑122 (MQ=255)

                aGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttcc                                                                                                                             <  1:919229/124‑3 (MQ=255)

                aGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCAtttttttcc                                                                                                                             >  2:919229/1‑122 (MQ=255)

                 gTAGGCTTTGCTTTGGTTGGTTGTGTGGCCGGTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTc                                                                                                           <  2:917875/140‑1 (MQ=255)

                     gCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑‑TTTTTTCCAGCTCTGTGACCTTGTCTTGGt                                                                                                      >  1:16233/1‑140 (MQ=255)

                      cTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGt                                                                                                      <  1:616770/140‑1 (MQ=255)

                       ttCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAGGCGGGCTTTTCGTTTTAGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgt                                                                                                                    >  2:831900/1‑125 (MQ=255)

                       ttCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCtgt                                                                                                                    <  1:831900/125‑1 (MQ=255)

                       ttCGCTTTGTTGTGTTGTGTGG‑‑GCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTaa                                                                                                   <  1:436712/140‑1 (MQ=255)

                         cGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTaa                                                                                                   >  2:331206/1‑140 (MQ=255)

                           cTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACt                                                                                                 <  2:441558/140‑1 (MQ=255)

                             ttgttgTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCa                                                                                               <  1:93742/140‑1 (MQ=255)

                                      tgtgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAAt                                                                                      <  2:204376/140‑1 (MQ=255)

                                        tgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg                                                                                    >  1:491898/1‑140 (MQ=255)

                                        tgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg                                                                                    >  1:150073/1‑140 (MQ=255)

                                        tgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg                                                                                    >  2:467158/1‑140 (MQ=255)

                                        tgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg                                                                                    >  2:1020641/1‑140 (MQ=255)

                                        tgtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg                                                                                    >  1:1078239/1‑140 (MQ=255)

                                         gtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGa                                                                                   >  1:841463/1‑140 (MQ=255)

                                         gtgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGa                                                                                   >  1:872400/1‑140 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAAcattgag                                                                                            >  1:740343/1‑124 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAAcattgag                                                                                            <  2:740343/130‑7 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACt                                                                                                 >  1:192915/1‑125 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACt                                                                                                 <  2:192915/125‑1 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGAt                                                                                  <  1:1020641/140‑1 (MQ=255)

                                          tgGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGAt                                                                                  <  1:467158/140‑1 (MQ=255)

                                            gCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑‑TTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTa                                                                               <  2:16233/140‑1 (MQ=255)

                                             cAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCATACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTa                                                                               <  1:331206/140‑1 (MQ=255)

                                               gCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAAc                                                                             >  2:1007479/1‑140 (MQ=255)

                                               gCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAAc                                                                             >  2:609486/1‑140 (MQ=255)

                                               gCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAAc                                                                             >  1:679635/1‑140 (MQ=255)

                                                cTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACa                                                                            >  1:748991/1‑140 (MQ=255)

                                                 tGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACAt                                                                           <  2:1078239/140‑1 (MQ=255)

                                                  gATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATa                                                                          <  2:872400/140‑1 (MQ=255)

                                                  gATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATa                                                                          <  2:841463/140‑1 (MQ=255)

                                                  gATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATa                                                                          >  2:704875/1‑140 (MQ=255)

                                                  gATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATa                                                                          >  1:134813/1‑140 (MQ=255)

                                                    tttttGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAAt                                                                        <  1:1007479/140‑1 (MQ=255)

                                                    tttttGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAAt                                                                        <  1:1065845/140‑1 (MQ=255)

                                                    tttttGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAAt                                                                        <  1:1103555/140‑1 (MQ=255)

                                                    tttttGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAAt                                                                        <  1:202744/140‑1 (MQ=255)

                                                             gctgctTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGt                                                               <  2:679635/140‑1 (MQ=255)

                                                                 ctTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGAtg                                                           <  1:237706/140‑1 (MQ=255)

                                                                         aaCAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtt                                                   >  1:775363/1‑140 (MQ=255)

                                                                         aaCAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtt                                                   >  2:112511/1‑140 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGa                                                             >  1:546724/1‑128 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGa                                                             <  2:546724/128‑1 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtttt                                                 <  1:546946/140‑1 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtttt                                                 >  2:1223169/1‑140 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtttt                                                 >  1:1149883/1‑140 (MQ=255)

                                                                           cAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtttt                                                 <  2:491898/140‑1 (MQ=255)

                                                                             gTTATTAAGCTGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGc                                               <  2:775363/140‑1 (MQ=255)

                                                                             gTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGc                                               <  2:134813/140‑1 (MQ=255)

                                                                             gTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGc                                               <  2:764355/140‑1 (MQ=255)

                                                                               tattaAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGc                                               >  2:615918/1‑138 (MQ=255)

                                                                               tattaAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGc                                               <  1:615918/138‑1 (MQ=255)

                                                                                   aaGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCgtgt                                                    <  1:1025218/129‑1 (MQ=255)

                                                                                   aaGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCgtgt                                                    >  2:1025218/1‑129 (MQ=255)

                                                                                      cGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACATACGTGATGTGCGTGTTTTGCGAGTTAAGa                                      >  2:769802/1‑140 (MQ=255)

                                                                                        ggCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAAc                                    >  1:139675/1‑140 (MQ=255)

                                                                                        ggCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAAc                                    >  1:733900/1‑140 (MQ=255)

                                                                                        ggCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAAc                                    >  1:1137196/1‑140 (MQ=255)

                                                                                        ggCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAAc                                    >  2:649769/1‑140 (MQ=255)

                                                                                          cTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAg                                  >  2:412155/1‑140 (MQ=255)

                                                                                           ttttcgttttcgTCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGa                                 <  1:112511/140‑1 (MQ=255)

                                                                                               cgttttcgtCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGaaaaa                             <  1:649769/140‑1 (MQ=255)

                                                                                               cgttttcgtCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGaaaaa                             <  2:543759/140‑1 (MQ=255)

                                                                                                 ttttcgtCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAAtt                           <  2:1149883/140‑1 (MQ=255)

                                                                                                      gtCTATCTCTTTAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTcc                      <  2:1114789/140‑1 (MQ=255)

                                                                                                                 tAGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCAc           >  2:731768/1‑140 (MQ=255)

                                                                                                                  aGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACg          <  2:395483/140‑1 (MQ=255)

                                                                                                                  aGCTACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACg          <  1:456207/140‑1 (MQ=255)

                                                                                                                     tACCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAgg       >  2:498093/1‑140 (MQ=255)

                                                                                                                      aCCGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGt      >  1:1121979/1‑140 (MQ=255)

                                                                                                                       ccGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCT‑CCTGTGCACGAGGTcc    >  2:80305/1‑140 (MQ=255)

                                                                                                                        cGGTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTcc    >  2:1188349/1‑140 (MQ=255)

                                                                                                                         ggTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTCCg   <  2:1123319/140‑1 (MQ=255)

                                                                                                                         ggTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTCCg   <  1:704875/140‑1 (MQ=255)

                                                                                                                          gTCAGACCA‑TTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTCCgg  >  1:142226/1‑140 (MQ=255)

GTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTGAACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGAGTTAAGAACAGAAAAATTGGTCCTACCTGTGCACGAGGTCCGG  >  NC_000913/3128007‑3128269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`