New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 374963NA (NA)45 (0.820) 13/190 2.6 NA noncoding (33/34 nt) other REP31a
?NC_000913 = 377487 NA (NA)intergenic (+176/+48) yaiL/frmB DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB

Only 100 of 166 total aligned reads displayed.

TGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTT  >  NC_000913/374824‑375102
                                                                                                                                               |                                                                                                                                            
tGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTAC                                                                                                                                              >  1:75882‑M1/1‑140 (MQ=255)
   cggcCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGa                                                                                                                                           <  1:1162199/140‑1 (MQ=255)
    ggcCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACactt                                                                                                                                          <  1:83785‑M1/140‑5 (MQ=255)
       cAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgc                                                                                                                                       <  2:1070365‑M1/140‑8 (MQ=255)
         ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGt                                                                                                                                     >  1:715574/1‑140 (MQ=255)
            ggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATTACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgta                                                                                                                                  <  2:432925‑M1/140‑13 (MQ=255)
            ggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgta                                                                                                                                  <  1:664037‑M1/140‑13 (MQ=255)
            ggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgta                                                                                                                                  <  2:485705‑M1/140‑13 (MQ=255)
               tatGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGAt                                                                                                                                          <  2:698381/129‑1 (MQ=255)
               tatGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGAt                                                                                                                                          >  1:698381/1‑129 (MQ=255)
                 tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAAttt                                                                                                                             <  1:583698/140‑1 (MQ=255)
                    tCGTTGACGTTGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACCCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtag                                                                                                                          >  2:124343‑M1/1‑120 (MQ=255)
                    tCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtag                                                                                                                          >  1:1022641‑M1/1‑120 (MQ=255)
                    tCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTa                                                                                                                          >  1:471669/1‑140 (MQ=255)
                    tCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTa                                                                                                                          >  1:500679/1‑140 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtagg                                                                                                                         >  1:625572‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtagg                                                                                                                         >  1:767389‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgta                                                                                                                                  >  1:677300‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgta                                                                                                                                  >  2:470041‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccg                                                                                                                                    >  2:434956‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccg                                                                                                                                    >  1:586827‑M1/1‑119 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccg                                                                                                                                    <  2:586827‑M1/129‑11 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccg                                                                                                                                    <  1:434956‑M1/129‑11 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAg                                                                                                                         >  1:107998/1‑140 (MQ=255)
                     cGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAg                                                                                                                         >  2:1288816/1‑140 (MQ=255)
                       ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                                                       >  1:236569/1‑140 (MQ=255)
                       ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                                                       >  1:833467/1‑140 (MQ=255)
                             tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataa                                                                                                                 <  2:625572‑M1/140‑30 (MQ=255)
                             tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataa                                                                                                                 <  1:902348‑M1/140‑30 (MQ=255)
                             tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataa                                                                                                                 <  1:32333‑M1/140‑30 (MQ=255)
                              ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataag                                                                                                                <  2:1022641‑M1/140‑31 (MQ=255)
                              ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataag                                                                                                                <  2:197795‑M1/140‑31 (MQ=255)
                              ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataag                                                                                                                <  1:1099191‑M1/140‑31 (MQ=255)
                               gcgcTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAg                                                                                                               <  2:107998/140‑1 (MQ=255)
                               gcgcTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAg                                                                                                               <  2:267362/140‑1 (MQ=255)
                                     gATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGt                                                                                                        <  2:681492/140‑1 (MQ=255)
                                          gcgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTGTGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGGCGCGTTAGCg                                                                                                   >  2:839887/1‑140 (MQ=255)
                                          gcgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCg                                                                                                   >  2:498413/1‑140 (MQ=255)
                                           cgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTGTGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGt                                                                                                  <  1:839887/140‑1 (MQ=255)
                                                caacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCAt                                                                                             >  1:806220/1‑140 (MQ=255)
                                                caacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATc                                                                                            >  2:1347614/1‑140 (MQ=255)
                                                        aatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATc                                                                                     >  2:526535/1‑140 (MQ=255)
                                                          tgatgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAAAGCGTCGCATc                                                                                            >  2:238708/1‑136 (MQ=18)
                                                           gatgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataaaacgcgcaaagcgtcgcatcaggcatggcg                                                                                   >  1:225912‑M1/1‑81 (MQ=255)
                                                           gatgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgcg                                                                                 <  1:1347614/140‑1 (MQ=255)
                                                               aCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                                                                                  <  2:1128493/136‑1 (MQ=255)
                                                                 tGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGa                                                                            <  2:660891/140‑1 (MQ=255)
                                                                    cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACg                                                                             >  2:1051701/1‑136 (MQ=255)
                                                                    cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACg                                                                             <  1:1051701/136‑1 (MQ=255)
                                                                    cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTg                                                                         >  1:284718/1‑140 (MQ=255)
                                                                     gagaACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGc                                                                        <  2:722551/140‑1 (MQ=255)
                                                                      agaACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGcc                                                                       >  1:1340307/1‑140 (MQ=255)
                                                                            tGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                                                                 <  2:1111214/140‑1 (MQ=255)
                                                                                     tATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAAc                                                        >  1:939339/1‑140 (MQ=255)
                                                                                     tATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAAc                                                        >  2:820156/1‑140 (MQ=255)
                                                                                         cccATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                                                           >  1:371727/1‑133 (MQ=255)
                                                                                           cATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTATGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                                                           >  2:92738/1‑131 (MQ=255)
                                                                                           cATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTATGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                                                           <  1:92738/131‑1 (MQ=255)
                                                                                            aTCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTAt                                                 <  2:284718/140‑1 (MQ=255)
                                                                                             tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCTGGATGCGGCGTGa                                                          >  1:745328/1‑130 (MQ=255)
                                                                                             tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCTGGATGCGGCGTGa                                                          <  2:745328/130‑1 (MQ=255)
                                                                                                cAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCgg                                             <  2:1468/140‑1 (MQ=39)
                                                                                                   cACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttat                                                   >  1:888684‑M1/1‑41 (MQ=255)
                                                                                                   cACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtg                                                             <  1:387582‑M1/122‑82 (MQ=255)
                                                                                                   cACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtg                                                             >  2:387582‑M1/1‑41 (MQ=255)
                                                                                                    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctac                                          >  2:1289461‑M1/1‑40 (MQ=255)
                                                                                                    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctac                                          >  1:1321658‑M1/1‑40 (MQ=255)
                                                                                                    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctac                                          >  1:735897‑M1/1‑40 (MQ=255)
                                                                                                      gACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacac                                        >  1:651172‑M1/1‑38 (MQ=255)
                                                                                                      gACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacac                                        >  1:467685‑M1/1‑38 (MQ=255)
                                                                                                        cTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGa                                     >  1:1468/1‑140 (MQ=38)
                                                                                                        cTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGa                                     <  2:236569/140‑1 (MQ=38)
                                                                                                        cTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGa                                     <  1:620863/140‑1 (MQ=38)
                                                                                                          gCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcg                                    >  1:544840‑M1/1‑34 (MQ=255)
                                                                                                           ccGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcg                                  <  2:340482/140‑7 (MQ=255)
                                                                                                           ccGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATgg                                  >  2:620863/1‑140 (MQ=40)
                                                                                                            cGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcc                                  <  1:315683‑M1/140‑109 (MQ=255)
                                                                                                            cGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcgc                                 <  1:244876/140‑8 (MQ=255)
                                                                                                            cGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcgc                                 <  2:715574/140‑8 (MQ=255)
                                                                                                             ggATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGgcg                                <  1:14627/140‑1 (MQ=40)
                                                                                                                tGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccata                              >  1:721406‑M1/1‑28 (MQ=255)
                                                                                                                  cggcgTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGa                           <  2:73112/140‑1 (MQ=40)
                                                                                                                   ggcgTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGaa                          >  1:73112/1‑140 (MQ=40)
                                                                                                                     cgTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccg                         >  2:1181559‑M1/1‑23 (MQ=255)
                                                                                                                     cgTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAAtt                        >  2:966875/1‑140 (MQ=40)
                                                                                                                      gTGAACGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgt                        <  2:341098‑M1/140‑119 (MQ=255)
                                                                                                                       tGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                      >  2:545950/1‑140 (MQ=40)
                                                                                                                       tGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                      >  2:14627/1‑140 (MQ=40)
                                                                                                                         aaCGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagg                     >  1:266685‑M1/1‑19 (MQ=255)
                                                                                                                         aaCGCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagg                     <  2:774271‑M1/140‑122 (MQ=255)
                                                                                                                          aCGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAg                   <  2:257527/140‑1 (MQ=40)
                                                                                                                            gCCTTATCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcct                  <  1:183699‑M1/140‑125 (MQ=255)
                                                                                                                              cTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGc                 <  2:274883/138‑1 (MQ=40)
                                                                                                                              cTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGc                 >  1:274883/1‑138 (MQ=40)
                                                                                                                                 aTCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataa             <  1:1032865‑M1/140‑130 (MQ=255)
                                                                                                                                  tCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataag            <  1:613233‑M1/140‑131 (MQ=255)
                                                                                                                                  tCCG‑‑‑‑GCCTACacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataag            <  2:897643‑M1/140‑131 (MQ=255)
                                                                                                                                   ccG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa          <  1:1259049/140‑1 (MQ=40)
                                                                                                                                               cGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAg         <  2:59948/133‑1 (MQ=40)
                                                                                                                                               cGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGtt  >  1:1174641/1‑140 (MQ=255)
                                                                                                                                               |                                                                                                                                            
TGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑GCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTT  >  NC_000913/374824‑375102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.