BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,829,052	A→G	K2K (AAA→AAG)	srlR →	DNA‑binding transcriptional repressor SrlR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,829,052	0	A	G	100.0%	445.6 / NA	121	K2K (AAA→AAG)	srlR	DNA‑binding transcriptional repressor SrlR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (68/53); total (68/53)

Only 100 of 122 total aligned reads displayed.

TCTTTCCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGC  >  NC_000913/2828916‑2829183

tCTTTCCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCt                                                                                                                                  >  1:225425/1‑140 (MQ=255)

     ccccATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTcgtca                                                                                                                             >  1:498294/1‑140 (MQ=255)

      cccATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTcgtcag                                                                                                                            >  2:1268389/1‑140 (MQ=255)

          tGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTcgtcagcgtc                                                                                                                        >  1:846079/1‑140 (MQ=255)

          tGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTcgtcagcgtc                                                                                                                        >  1:1132700/1‑140 (MQ=255)

                 cTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGgccgc                                                                                                                 >  1:141218/1‑140 (MQ=255)

                   aTCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCa                                                                                                               >  1:1353612/1‑140 (MQ=255)

                    tCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCAt                                                                                                              <  2:258241/140‑1 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGgccgcc                                                                                                                <  2:583302/135‑1 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGgccgcc                                                                                                                >  1:583302/1‑135 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCt                                                                                                           >  2:90682/1‑140 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCt                                                                                                           >  1:78118/1‑140 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCt                                                                                                           >  2:1235518/1‑140 (MQ=255)

                       caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCt                                                                                                           >  1:1052339/1‑140 (MQ=255)

                          aaTGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGa                                                                                                        >  2:426079/1‑140 (MQ=255)

                            tGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCATCAGGCCGCCATTCTGGAGt                                                                                                      >  2:72258/1‑140 (MQ=255)

                              ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCa                                                                                                               <  2:586282/129‑1 (MQ=255)

                              ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCa                                                                                                               >  1:586282/1‑129 (MQ=255)

                              ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTAt                                                                                                    >  1:941692/1‑140 (MQ=255)

                              ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAACGTCAGGCCGCCATTCTGGAGTAt                                                                                                    >  1:155462/1‑140 (MQ=255)

                              ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTAGTCAGCGTCAGGCCGCCATTCTGGAGTAt                                                                                                    >  2:1027861/1‑140 (MQ=255)

                              ctctATCATTGGCGCTTAAACCGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTAt                                                                                                    >  1:98985/1‑140 (MQ=255)

                                    cATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaa                                                                                              >  1:695041/1‑140 (MQ=255)

                                      ttGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaaaa                                                                                            >  1:738046/1‑140 (MQ=255)

                                       tGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAg                                                                                           <  2:498294/140‑1 (MQ=255)

                                        ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGc                                                                                          >  2:1338609/1‑140 (MQ=255)

                                        ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGc                                                                                          >  2:197670/1‑140 (MQ=255)

                                        ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGc                                                                                          >  2:902647/1‑140 (MQ=255)

                                        ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGc                                                                                          <  2:815814/140‑1 (MQ=255)

                                        ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGc                                                                                          <  1:1060881/140‑1 (MQ=255)

                                         gcgcTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCa                                                                                         <  2:846079/140‑1 (MQ=255)

                                         gcgcTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCa                                                                                         >  1:153294/1‑140 (MQ=255)

                                           gcTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAgg                                                                                       >  2:681515/1‑140 (MQ=255)

                                             ttAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt                                                                                     >  2:307312/1‑140 (MQ=255)

                                             ttAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt                                                                                     >  1:105476/1‑140 (MQ=255)

                                             ttAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt                                                                                     >  2:1171578/1‑140 (MQ=255)

                                             ttAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt                                                                                     >  2:640541/1‑140 (MQ=255)

                                                   tGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGc                                                                               >  2:355024/1‑140 (MQ=255)

                                                    gAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt                                                                              <  2:141218/140‑1 (MQ=255)

                                                    gAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt                                                                              <  1:307312/140‑1 (MQ=255)

                                                    gAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTAGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt                                                                              <  1:1027861/140‑1 (MQ=255)

                                                     aaaCGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTc                                                                             >  2:58028/1‑140 (MQ=255)

                                                          tGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt                                                                              >  2:427611/1‑134 (MQ=255)

                                                          tGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt                                                                              <  1:427611/134‑1 (MQ=255)

                                                          tGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTg                                                                        <  1:395536/140‑1 (MQ=255)

                                                                aTTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAAt                                                                  <  2:738046/140‑1 (MQ=255)

                                                                 tttCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAAtt                                                                 >  2:843185/1‑140 (MQ=255)

                                                                      ttGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAGGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGgcgc                                                            >  1:1194430/1‑140 (MQ=255)

                                                                      ttGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGgcgc                                                            <  2:853197/140‑1 (MQ=255)

                                                                         tgAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAAt                                                         >  1:1317024/1‑140 (MQ=255)

                                                                               ttACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTg                                                   >  2:1253194/1‑140 (MQ=255)

                                                                               ttACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTg                                                   <  1:426079/140‑1 (MQ=255)

                                                                                tACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGa                                                  <  2:695041/140‑1 (MQ=255)

                                                                                tACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAACGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGa                                                  <  2:155462/140‑1 (MQ=255)

                                                                                   ttgcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGacac                                               >  2:1115328/1‑140 (MQ=255)

                                                                                   ttgcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGacac                                               >  1:169519/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             >  1:1173290/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             <  1:1338609/140‑1 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             >  2:197564/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             <  2:162392/140‑1 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             >  1:1258216/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             >  2:510159/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             >  2:960751/1‑140 (MQ=255)

                                                                                     gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGAcacca                                             <  2:78118/140‑1 (MQ=255)

                                                                                        tgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAg                                          >  2:1331019/1‑140 (MQ=255)

                                                                                        tgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAg                                          >  2:191463/1‑140 (MQ=255)

                                                                                         gcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAgg                                         >  2:503675/1‑140 (MQ=255)

                                                                                         gcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAgg                                         <  1:902647/140‑1 (MQ=255)

                                                                                         gcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAgg                                         <  1:191463/140‑1 (MQ=255)

                                                                                             aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGcaca                                     <  1:843185/140‑1 (MQ=255)

                                                                                                  tCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCAt                                <  2:169519/140‑1 (MQ=255)

                                                                                                  tCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCAt                                <  1:703754/140‑1 (MQ=255)

                                                                                                  tCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCAt                                <  2:718003/140‑1 (MQ=255)

                                                                                                   cATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCAtt                               >  1:890676/1‑140 (MQ=255)

                                                                                                     ttttGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCg                             >  1:1324432/1‑140 (MQ=255)

                                                                                                       ttGAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCa                           >  2:589168/1‑140 (MQ=255)

                                                                                                         gAAACCTAAATCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCaaa                         >  2:416979/1‑140 (MQ=255)

                                                                                                                aaaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTgg                  <  2:745204/140‑1 (MQ=255)

                                                                                                                aaaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTgg                  <  2:1195790/140‑1 (MQ=255)

                                                                                                                aaaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTgg                  <  2:132797/140‑1 (MQ=255)

                                                                                                                aaaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTgg                  <  1:58028/140‑1 (MQ=255)

                                                                                                                 aaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTgg                  >  2:450005/1‑139 (MQ=255)

                                                                                                                 aaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 <  2:1258216/140‑1 (MQ=255)

                                                                                                                 aaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 <  2:476254/140‑1 (MQ=255)

                                                                                                                 aaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 <  1:416979/140‑1 (MQ=255)

                                                                                                                 aaTCAGGTAATCACGCCCATGAAGCCTCGTCAGCATCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 <  1:72258/140‑1 (MQ=255)

                                                                                                                     aGGTAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCAtt             <  1:355024/140‑1 (MQ=255)

                                                                                                                        tAATCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTg          >  2:639479/1‑140 (MQ=255)

                                                                                                                           tCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 >  2:1349737/1‑130 (MQ=255)

                                                                                                                           tCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       <  1:1331019/140‑1 (MQ=255)

                                                                                                                           tCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       <  2:1132700/140‑1 (MQ=255)

                                                                                                                           tCACGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       >  1:144307/1‑140 (MQ=255)

                                                                                                                             aCGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       >  1:916895/1‑138 (MQ=255)

                                                                                                                             aCGCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       <  2:916895/138‑1 (MQ=255)

                                                                                                                               gCCCATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATg   >  1:1041527/1‑140 (MQ=255)

                                                                                                                                cccATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 >  1:633402/1‑125 (MQ=255)

                                                                                                                                cccATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGt                 <  2:633402/125‑1 (MQ=255)

                                                                                                                                cccATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGc  <  2:1324432/140‑1 (MQ=255)

                                                                                                                                 ccATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       >  2:1088758/1‑134 (MQ=255)

                                                                                                                                 ccATGAAGCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGaa       <  1:1088758/134‑1 (MQ=255)

TCTTTCCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGC  >  NC_000913/2828916‑2829183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`