Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,839,566	A→G	L143P (CTT→CCT)	nlpA ←	lipoprotein‑28

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,839,566	0	A	G	100.0%	236.8 / NA	65	L143P (CTT→CCT)	nlpA	lipoprotein‑28
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (37/28);  total (37/28)

CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAA‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCC  >  NC_000913/3839433‑3839700                                                                                                                                      |                                                                                                                                        cTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTgg                                                                                                                                  >  2:44700/1‑140 (MQ=255)      cccccTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTggtcggg                                                                                                                             <  1:44700/140‑1 (MQ=255)      cccccTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTggtcggg                                                                                                                             <  2:918190/140‑1 (MQ=255)          cTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGt                                                                                                                         <  2:734344/140‑1 (MQ=255)          cTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGt                                                                                                                         >  1:1314801/1‑140 (MQ=255)               gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg                                                                                                                    <  1:54390/140‑1 (MQ=255)               gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg                                                                                                                    <  1:1141661/140‑1 (MQ=255)               gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg                                                                                                                    <  2:1147038/140‑1 (MQ=255)                        tCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACt                                                                                                           <  1:1153172/140‑1 (MQ=255)                          tGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCa                                                                                                             <  1:1294465/136‑1 (MQ=255)                          tGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCa                                                                                                             >  2:1294465/1‑136 (MQ=255)                              aaTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg                                                                                                     <  1:890039/140‑1 (MQ=255)                              aaTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg                                                                                                     <  1:87130/140‑1 (MQ=255)                               aTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCCTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc                                                                                                    <  1:1238227/140‑1 (MQ=255)                                  aCGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCctt                                                                                                 <  2:1268862/140‑1 (MQ=255)                                      ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg                                                                                                     >  1:1252681/1‑132 (MQ=255)                                      ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg                                                                                                     <  2:1252681/132‑1 (MQ=255)                                      ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc                                                                                                    >  1:1154116/1‑133 (MQ=255)                                      ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc                                                                                                    <  2:1154116/133‑1 (MQ=255)                                            tCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTg                                                                                       >  2:185895/1‑140 (MQ=255)                                                  atatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCAc                                                                                 >  2:858959/1‑140 (MQ=255)                                                   tatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCa                                                                                  <  2:1206528/138‑1 (MQ=255)                                                   tatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCa                                                                                  >  1:1206528/1‑138 (MQ=255)                                                          cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa                                                                         >  1:719307/1‑140 (MQ=255)                                                          cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa                                                                         >  2:1117911/1‑140 (MQ=255)                                                          cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa                                                                         >  1:111916/1‑140 (MQ=255)                                                            cgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtt                                                                       >  1:877397/1‑140 (MQ=255)                                                              gtaggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtttt                                                                     >  1:1129637/1‑140 (MQ=255)                                                              gtaggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtttt                                                                     >  1:334039/1‑140 (MQ=255)                                                               taggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAttttt                                                                    <  2:111916/140‑1 (MQ=255)                                                                    aataaCCCTTTTCCCTCTTTCAGAGCAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGa                                                               >  1:1335919/1‑140 (MQ=255)                                                                        ccccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTTTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATaa                                                           <  2:1338803/139‑1 (MQ=255)                                                                         cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc                                                          >  2:899519/1‑140 (MQ=255)                                                                         cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc                                                          <  1:185895/140‑1 (MQ=255)                                                                         cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc                                                          <  2:1087524/140‑1 (MQ=255)                                                                         cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc                                                          >  1:99688/1‑140 (MQ=255)                                                                          ccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAcc                                                         <  2:1129637/140‑1 (MQ=255)                                                                          ccTTTCCCCTTTTTCAGAGTAATTAGCTTCTTTTTTTGCAACAGTAAAGGGGCGCGCCCAG‑GGTTGGTGGGGTCGTTGGGGATCGCCACTGTCGCGCCTTTTTTTATTTGCCCCACGGTTTTGATTTTTTTGGAATAAcc                                                         <  2:334039/140‑1 (MQ=255)                                                                           cTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAccc                                                        >  1:489644/1‑140 (MQ=255)                                                                             tttCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGc                                                      >  2:915974/1‑140 (MQ=255)                                                                               tCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCa                                                    <  1:440645/140‑1 (MQ=255)                                                                                 ccTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCGG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATa                                                  <  2:1106865/140‑1 (MQ=255)                                                                                   tctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAgg                                                >  2:600887/1‑140 (MQ=255)                                                                                    ctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAggg                                               >  1:71407/1‑140 (MQ=255)                                                                                    ctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAggg                                               >  2:407017/1‑140 (MQ=255)                                                                                        cAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGa                                           >  2:535470/1‑140 (MQ=255)                                                                                        cAGAGAAATGACCTTCTCTTTTTGCAAGATAAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTGGGGGATCCCCACTGCCGCGCTTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAGCCCGCCATAGGGAAGa                                           <  2:489644/140‑1 (MQ=255)                                                                                               aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt                                    >  1:263269/1‑140 (MQ=255)                                                                                               aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt                                    >  1:186709/1‑140 (MQ=255)                                                                                               aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt                                    >  1:285622/1‑140 (MQ=255)                                                                                                ttAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTa                                   >  2:1354796/1‑140 (MQ=255)                                                                                                    cTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTc                               <  1:407017/140‑1 (MQ=255)                                                                                                      tctcTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTccc                             >  1:739651/1‑140 (MQ=255)                                                                                                       ctctTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGaa                                             <  1:243669/123‑1 (MQ=255)                                                                                                       ctctTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGaa                                             >  2:243669/1‑123 (MQ=255)                                                                                                              tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  1:535470/140‑1 (MQ=255)                                                                                                              tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  2:739651/140‑1 (MQ=255)                                                                                                              tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  2:380491/140‑1 (MQ=255)                                                                                                               ggaaacatAAAAGGGCGGGGCCAAGGGTTGGTGGGGTGGTGGGGGTTGGCCCCTGTGGCGCTTTTTTTTATTTGCGCCGCGTTTTTGTTTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  2:1335919/133‑1 (MQ=255)                                                                                                                aaaCAGTAAAAGTGCGCGACCGG‑GGTTGGTCGGGTCGTTGGGGATCCCCACTGTCGCGCCTTCTTTTATTTGCGCCCCGGTTTTGATTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCa                   <  2:263269/139‑1 (MQ=255)                                                                                                                    aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGTCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     >  2:1215715/1‑134 (MQ=255)                                                                                                                    aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  1:608315/134‑1 (MQ=255)                                                                                                                    aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  1:1215715/134‑1 (MQ=255)                                                                                                                    aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     >  2:608315/1‑134 (MQ=255)                                                                                                                      tAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTtat             >  1:211956/1‑140 (MQ=255)                                                                                                                          aGTGCGCGACCGG‑GGTTGGTGGGGTCGTTGGGGACCGCCACTGCCGCCCTTTCTTTTATTTGCGCCACGGTTTTAATTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAAcc         <  2:877397/140‑1 (MQ=255)                                                                                                                             gcgcGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATg      <  1:600887/140‑1 (MQ=255)                                                                                                                              cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     <  1:88574/124‑1 (MQ=255)                                                                                                                              cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc                     >  2:88574/1‑124 (MQ=255)                                                                                                                              cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgc     >  2:850097/1‑140 (MQ=255)                                                                                                                               gcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACATATTTCCCACCGCTACCAGTTTATAACCATgcg    >  1:1269944/1‑140 (MQ=255)                                                                                                                                cgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgcgc   >  1:159856/1‑140 (MQ=255)                                                                                                                                cgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgcgc   >  2:878121/1‑140 (MQ=255)                                                                                                                                 gACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGcc  <  1:892452/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                        CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAA‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCC  >  NC_000913/3839433‑3839700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑