BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,939,658	T→C	T319A (ACC→GCC)	hsrA ←	putative transporter HsrA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,939,658	0	T	C	100.0%	545.1 / NA	148	T319A (ACC→GCC)	hsrA	putative transporter HsrA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (73/75); total (73/75)

Only 100 of 151 total aligned reads displayed.

AATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTT  >  NC_000913/3939522‑3939794

aaTATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGAGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAAc                                                                                                                                       >  2:808885/1‑140 (MQ=255)

   ataAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCAt                                                                                                                                    <  1:840780/140‑1 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAt                                                                                                                                <  1:35013/140‑1 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAt                                                                                                                                >  1:663812/1‑140 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAt                                                                                                                                >  2:897903/1‑140 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAt                                                                                                                                >  1:1194175/1‑140 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAt                                                                                                                                >  2:628981/1‑140 (MQ=255)

       acaacGGCAAGATCAGCATCCATATAGCCATTGCTGGGGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGAAAGCCCAGACGACGTAAGACTTGGGCAACCATCAAt                                                                                                                                >  2:1186096/1‑140 (MQ=255)

        caacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAtt                                                                                                                               >  2:786275/1‑140 (MQ=255)

           cGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTg                                                                                                                            >  1:699541/1‑140 (MQ=255)

           cGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTg                                                                                                                            >  2:1101665/1‑140 (MQ=255)

           cGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTg                                                                                                                            >  1:251730/1‑140 (MQ=255)

           cGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTg                                                                                                                            >  1:226709/1‑140 (MQ=255)

            ggCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGc                                                                                                                           >  1:302849/1‑140 (MQ=255)

             gCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCa                                                                                                                          <  2:998273/140‑1 (MQ=255)

              cAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGAATTTGCaa                                                                                                                         <  2:1167165/140‑1 (MQ=255)

                   tCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATg                                                                                                                    >  2:446841/1‑140 (MQ=255)

                        aTCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCaa                                                                                                                         <  2:519891/130‑1 (MQ=255)

                        aTCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCaa                                                                                                                         >  1:519891/1‑130 (MQ=255)

                         tCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCt                                                                                                              >  1:377877/1‑140 (MQ=255)

                             tataGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACg                                                                                                          <  2:1244904/140‑1 (MQ=255)

                             tataGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACg                                                                                                          >  1:985446/1‑140 (MQ=255)

                             tataGCCATTGCTGGTGATTGCAAAAAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACg                                                                                                          >  1:974823/1‑140 (MQ=255)

                              ataGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACg                                                                                                          >  1:827962/1‑139 (MQ=255)

                                  ccATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTc                                                                                                     >  1:1227582/1‑140 (MQ=255)

                                    aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTaa                                                                                                            <  2:1327216/131‑1 (MQ=255)

                                    aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTaa                                                                                                            >  1:1327216/1‑131 (MQ=255)

                                    aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCgg                                                                                                   <  1:628981/140‑1 (MQ=255)

                                    aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCgg                                                                                                   <  2:377877/140‑1 (MQ=255)

                                    aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCgg                                                                                                   >  2:624912/1‑140 (MQ=255)

                                     ttGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGt                                                                                                  >  1:1163621/1‑140 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTATCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 <  2:940810/140‑1 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 <  2:228065/140‑1 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 >  2:813184/1‑140 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 >  1:1049311/1‑140 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 >  1:118098/1‑140 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 >  1:228065/1‑140 (MQ=255)

                                      tGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTg                                                                                                 >  1:270043/1‑140 (MQ=255)

                                       gCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGc                                                                                                >  1:65076/1‑140 (MQ=255)

                                       gCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGc                                                                                                >  2:958273/1‑140 (MQ=255)

                                        atGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGcc                                                                                               <  1:232731/139‑1 (MQ=255)

                                              aTTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATa                                                                                         <  2:226709/140‑1 (MQ=255)

                                              aTTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATa                                                                                         <  2:1059824/140‑1 (MQ=255)

                                                tGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATAca                                                                                       <  2:556146/140‑1 (MQ=255)

                                                 gCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATAcag                                                                                      <  2:118098/140‑1 (MQ=255)

                                                 gCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATAcag                                                                                      <  1:803547/140‑1 (MQ=255)

                                                     agagAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATAcagccag                                                                                  <  2:65076/140‑1 (MQ=255)

                                                       agaACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGcc                                                                                               >  2:140366/1‑125 (MQ=255)

                                                       agaACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGcc                                                                                               <  1:140366/125‑1 (MQ=255)

                                                         aaCTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAAt                                                                              >  1:158243/1‑140 (MQ=255)

                                                            tGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATaaa                                                                           >  2:1270889/1‑140 (MQ=255)

                                                              aGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATaaa                                                                           <  2:304979/138‑1 (MQ=255)

                                                              aGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACg                                                                         >  1:929742/1‑140 (MQ=255)

                                                                 gATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCt                                                                      >  2:1050423/1‑140 (MQ=255)

                                                                 gATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCt                                                                      <  1:1350387/140‑1 (MQ=255)

                                                                   tCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGa                                                                    >  2:46450/1‑140 (MQ=255)

                                                                   tCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGa                                                                    >  2:116420/1‑140 (MQ=255)

                                                                         gCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCa                                                              >  2:983244/1‑140 (MQ=255)

                                                                          cccAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCaa                                                             <  2:1156534/140‑1 (MQ=255)

                                                                           ccAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCaaa                                                            <  1:313531/140‑1 (MQ=255)

                                                                             aataatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATc                                                          <  1:624912/140‑1 (MQ=255)

                                                                             aataatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATc                                                          >  2:796430/1‑140 (MQ=255)

                                                                               taatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCt                                                        <  2:584418/140‑1 (MQ=255)

                                                                               taatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCt                                                        <  1:46450/140‑1 (MQ=255)

                                                                                aatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTa                                                       <  1:796430/140‑1 (MQ=255)

                                                                                      cGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTa                                                 <  1:1101665/140‑1 (MQ=255)

                                                                                          aTCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTAc                                                      <  1:348622/131‑1 (MQ=255)

                                                                                          aTCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTAc                                                      >  2:348622/1‑131 (MQ=255)

                                                                                           tCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATc                                            <  2:302849/140‑1 (MQ=255)

                                                                                             cccACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCaa                                          <  2:241797/140‑1 (MQ=255)

                                                                                             cccACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCaa                                          <  2:34296/140‑1 (MQ=255)

                                                                                               cACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATg                                        <  2:4383/140‑1 (MQ=255)

                                                                                                    aCGTATGGCGATAGCCAAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATa                                   <  1:1142468/140‑1 (MQ=255)

                                                                                                     cGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATaa                                  >  1:69746/1‑140 (MQ=255)

                                                                                                     cGTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATaa                                  >  1:1245999/1‑140 (MQ=255)

                                                                                                      gTATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAg                                 <  1:983244/140‑1 (MQ=255)

                                                                                                       tATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAgg                                >  2:24122/1‑140 (MQ=255)

                                                                                                       tATGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAgg                                >  2:18173/1‑140 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  1:255721/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  1:541702/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  2:707973/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  1:116420/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  1:958273/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  2:663812/140‑1 (MQ=255)

                                                                                                         tGGCGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGaa                              <  2:699541/140‑1 (MQ=255)

                                                                                                            cGATAGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGGCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACgg                           >  2:907675/1‑140 (MQ=255)

                                                                                                              aTAGCCCAGACGACGTAAGACTTGAGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTa                         >  1:138436/1‑140 (MQ=255)

                                                                                                                aGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATa                                   <  1:1016251/128‑1 (MQ=255)

                                                                                                                aGCCCAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATa                                   >  2:1016251/1‑128 (MQ=255)

                                                                                                                    cAGACGACGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGc                   >  1:863080/1‑140 (MQ=255)

                                                                                                                      gacgacGTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCg                 >  2:417679/1‑140 (MQ=255)

                                                                                                                        cgacgTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCggc               <  1:417679/140‑2 (MQ=255)

                                                                                                                            gTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCcccc           >  2:154648/1‑140 (MQ=255)

                                                                                                                               aGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa        <  2:1245999/140‑1 (MQ=255)

                                                                                                                               aGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa        <  1:613659/140‑1 (MQ=255)

                                                                                                                                gACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGAc       >  1:330886/1‑140 (MQ=255)

                                                                                                                                 aCTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGGCCCCAGACg      <  2:929742/140‑1 (MQ=255)

                                                                                                                                 aCTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACg      <  1:24122/140‑1 (MQ=255)

                                                                                                                                   ttGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACggg    >  2:140115/1‑140 (MQ=255)

                                                                                                                                     gggCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGtt  <  1:154648/140‑1 (MQ=255)

AATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTT  >  NC_000913/3939522‑3939794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`