| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,939,781 | T→C | T278A (ACC→GCC) | hsrA ← | putative transporter HsrA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,939,781 | 0 | T | C | 99.1% | 405.1 / ‑3.6 | 111 | T278A (ACC→GCC) | hsrA | putative transporter HsrA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (53/57); minor base G (0/1); total (53/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAC > NC_000913/3939646‑3939916 | gTAAGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCcccc > 2:154648/1‑140 (MQ=255) aGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa < 2:1245999/140‑1 (MQ=255) aGACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa < 1:613659/140‑1 (MQ=255) gACTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGAc > 1:330886/1‑140 (MQ=255) aCTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGGCCCCAGACg < 2:929742/140‑1 (MQ=255) aCTTGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACg < 1:681450/140‑1 (MQ=255) ttGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACggg > 2:341091/1‑140 (MQ=255) ttGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACggg > 2:1177067/1‑140 (MQ=255) ttGGGCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACggg > 2:140115/1‑140 (MQ=255) gggcaaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa > 2:258853/5‑134 (MQ=255) gggcaaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGtt > 1:580431/5‑140 (MQ=255) gggcaaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGtt > 2:935018/5‑140 (MQ=255) gggCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGa < 1:258853/134‑1 (MQ=255) gggCAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGtt < 1:154648/140‑1 (MQ=255) ggcaaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGGCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTg < 1:907675/137‑1 (MQ=255) ggcaaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTg < 1:1050142/137‑1 (MQ=255) caaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCa < 1:18173/139‑1 (MQ=255) aaCCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCaa < 1:446841/140‑1 (MQ=255) ccATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAata > 1:13330/1‑140 (MQ=255) ccATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAata < 2:330886/140‑1 (MQ=255) aTCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATAtt < 2:863080/140‑1 (MQ=255) aTCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATAtt < 2:617178/140‑1 (MQ=255) cGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGc < 1:813184/140‑1 (MQ=255) cAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATa < 2:13330/140‑1 (MQ=255) cAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATa < 1:897903/140‑1 (MQ=255) cAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATa < 1:1186096/140‑1 (MQ=255) ataatGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATAcc < 2:251730/140‑1 (MQ=255) atGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGTAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGAt > 2:570536/1‑140 (MQ=255) atGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGAt < 1:1289238/140‑1 (MQ=255) atGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGAt > 1:1236525/1‑140 (MQ=255) atGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGAt > 1:542041/1‑140 (MQ=255) ccTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCTATCGAGaa > 1:175514/1‑140 (MQ=255) tAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAg > 2:554307/1‑140 (MQ=255) aaCGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGt > 2:225994/1‑140 (MQ=255) aaCGCTGTCGGTGCC‑‑CATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCgaga < 1:1123414/134‑1 (MQ=255) aCGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTg > 2:747336/1‑140 (MQ=255) aCGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTg > 2:266995/1‑140 (MQ=255) cGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGc < 2:28279/140‑1 (MQ=255) tCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGtt < 1:225994/140‑1 (MQ=255) cGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGttt > 1:673003/1‑140 (MQ=255) gccagcAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATg < 2:270043/140‑1 (MQ=255) agcAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGaaa > 1:1188832/1‑140 (MQ=255) agcAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGaaa > 2:815602/1‑140 (MQ=255) agcAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGaaa > 1:78529/1‑140 (MQ=255) cAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAAtt > 2:1253188/1‑140 (MQ=255) cAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAAtt < 2:1227582/140‑1 (MQ=255) cAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAAtt > 1:1205252/1‑140 (MQ=255) cAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAAtt > 1:271633/1‑140 (MQ=255) aTAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTaa < 2:138436/140‑1 (MQ=255) cGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGt < 2:542041/140‑1 (MQ=255) cTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTg > 1:786759/1‑140 (MQ=255) cTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTg > 1:853089/1‑140 (MQ=255) tAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGgcgt < 1:554307/140‑1 (MQ=255) aCCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCTCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGgcgtgc < 2:1188832/140‑1 (MQ=255) aaTCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGcgtcg > 1:153381/1‑140 (MQ=255) aTCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCTATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGcgtcgt < 2:175514/140‑1 (MQ=255) ccTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGc < 2:153381/140‑1 (MQ=255) ccTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGc < 2:974823/140‑1 (MQ=255) ccTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCATCGTGc < 2:78529/140‑1 (MQ=255) cTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCa < 1:1050423/140‑1 (MQ=255) tACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCAt < 1:775597/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 2:158243/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 1:935018/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 2:580431/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 2:1194175/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 2:1049311/140‑1 (MQ=255) cTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 1:747336/140‑1 (MQ=255) tAACATCAATGGCATAAGGGACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga > 2:643147/1‑137 (MQ=255) tAACATCAATGGCATAAGGGACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGga < 1:643147/137‑1 (MQ=255) tAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGTGTGcgtcgt < 1:349959/130‑1 (MQ=255) tAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGTGTGcgtcgt > 2:349959/1‑130 (MQ=255) tAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGc > 1:511603/1‑132 (MQ=255) tAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGc < 2:511603/132‑1 (MQ=255) tAACATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGaa > 1:958332/1‑140 (MQ=255) aaCATCAATGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAat > 2:24214/1‑140 (MQ=255) aCATCAATGGCATAAGGAACGGTACACAGCCGTCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAata < 2:1205252/140‑1 (MQ=255) cATCAATGGCATAAGGAACGGTATACAGCCGGCCCCCAGACGGGTTGGAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAatat > 2:381028/1‑140 (MQ=255) aaTGGCATAAGGAACGGTATACAGCCGGCCCCCAGACGGGTTGGAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATagag < 1:381028/140‑1 (MQ=255) aaTGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCAt > 2:628931/1‑127 (MQ=255) aaTGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCAt < 1:628931/127‑1 (MQ=255) aTGGCATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAgaga > 2:982755/1‑140 (MQ=255) cATAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCa > 1:42351/1‑140 (MQ=255) aTAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAg < 2:554382/140‑1 (MQ=255) tAAGGAACGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGAGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGt > 1:1099349/1‑140 (MQ=255) aCGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCg > 1:1112447/1‑140 (MQ=255) cGGTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGa > 2:1088366/1‑140 (MQ=255) ggTACACAGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGAt > 1:916705/1‑140 (MQ=255) caGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGt > 1:419662/1‑140 (MQ=255) caGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGt < 1:24214/140‑1 (MQ=255) aGCCGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTg > 1:639066/1‑140 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAg < 1:386961/122‑1 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAg > 2:386961/1‑122 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTg < 2:1071993/135‑1 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTg > 1:1071993/1‑135 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGt < 1:814944/137‑1 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGt > 2:814944/1‑137 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAc > 1:144116/1‑140 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAc > 1:1309334/1‑140 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAc > 1:67903/1‑140 (MQ=255) ccGGCCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGCGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAc > 2:1227767/1‑140 (MQ=255) | GTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGAC > NC_000913/3939646‑3939916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |