BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,212,816	C→T	A98T (GCG→ACG)	ycgX ←	uncharacterized protein YcgX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,212,816	0	C	T	100.0%	410.1 / NA	113	A98T (GCG→ACG)	ycgX	uncharacterized protein YcgX
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/62); total (51/62)

Only 100 of 117 total aligned reads displayed.

CATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGCGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACAAAACC  >  NC_000913/1212679‑1212952

cATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCgtgc                                                                                                                                        >  1:879690/1‑140 (MQ=255)

cATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCgtgc                                                                                                                                        >  1:782111/1‑140 (MQ=255)

cATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCgtgc                                                                                                                                        >  1:57912/1‑140 (MQ=255)

 aTTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGcc                                                                                                                                       <  2:1067922/140‑1 (MQ=255)

    tCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGc                                                                                                                                    <  2:879690/140‑1 (MQ=255)

    tCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGc                                                                                                                                    <  2:819552/140‑1 (MQ=255)

    tCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGc                                                                                                                                    <  1:251684/140‑1 (MQ=255)

      ttAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCa                                                                                                                                  <  2:1316654/140‑1 (MQ=255)

      ttAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCa                                                                                                                                  <  2:384137/140‑1 (MQ=255)

            aTCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTg                                                                                                                            <  1:1146424/140‑1 (MQ=255)

            aTCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTg                                                                                                                            <  2:1092586/140‑1 (MQ=255)

            aTCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTg                                                                                                                            <  2:628309/140‑1 (MQ=255)

             tCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGa                                                                                                                           >  2:1356351/1‑140 (MQ=255)

             tCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGa                                                                                                                           >  2:270925/1‑140 (MQ=255)

             tCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGa                                                                                                                           >  2:30670/1‑140 (MQ=255)

             tCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGa                                                                                                                           >  2:592100/1‑140 (MQ=255)

              ccAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGaa                                                                                                                          <  2:1054560/140‑1 (MQ=255)

               cAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAAc                                                                                                                         >  2:63366/1‑140 (MQ=255)

                aaCTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACa                                                                                                                        <  2:166625/140‑1 (MQ=255)

                  cTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGt                                                                                                                      >  2:1005720/1‑140 (MQ=255)

                   tttAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGc                                                                                                                                    <  1:1179371/125‑1 (MQ=255)

                   tttAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGc                                                                                                                                    >  2:1179371/1‑125 (MQ=255)

                     tAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTAtt                                                                                                                   >  1:520933/1‑140 (MQ=255)

                        cTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTccc                                                                                                                <  1:237171/140‑1 (MQ=255)

                        cTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTccc                                                                                                                <  1:1356351/140‑1 (MQ=255)

                        cTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAATATTccc                                                                                                                <  1:1364447/140‑1 (MQ=255)

                           gATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGaa                                                                                                             <  1:63366/140‑1 (MQ=255)

                            tgtAATGGCTTATTATTTTCTACATCTTCAATATATAAATGCGTATTATCAATGGCGTAGCAACTTCGTTTGTTATGTTTAACATCAGTAACCCACCGGAAAACTCTCGAGCCTGCCAGTGTTGAACAGTATTCCCGaaa                                                                                                            >  2:532953/3‑140 (MQ=255)

                            aTTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGaaa                                                                                                            >  1:492034/1‑140 (MQ=255)

                            aTTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGaaa                                                                                                            >  2:537363/1‑140 (MQ=255)

                               aaTGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGt                                                                                                         <  1:232111/140‑1 (MQ=255)

                                     ttattaTTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGAttt                                                                                                   <  2:1151677/140‑1 (MQ=255)

                                     ttattaTTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGAttt                                                                                                   >  1:824284/1‑140 (MQ=255)

                                         tattTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCg                                                                                               <  1:263570/140‑1 (MQ=255)

                                          attTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGc                                                                                              <  2:782111/140‑1 (MQ=255)

                                            tttCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCaa                                                                                            <  2:824284/140‑1 (MQ=255)

                                                  cATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGa                                                                                      >  2:1246419/1‑140 (MQ=255)

                                                     cTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGc                                                                                   >  1:208790/1‑140 (MQ=255)

                                                        cAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAAt                                                                                >  2:719540/1‑140 (MQ=255)

                                                            atataAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCgg                                                                            >  1:1167462/1‑140 (MQ=255)

                                                             tataAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAata                                                                                         >  1:42595/1‑126 (MQ=255)

                                                             tataAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAata                                                                                         <  2:42595/126‑1 (MQ=255)

                                                             tataAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGc                                                                           <  1:778798/140‑1 (MQ=255)

                                                              ataAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGcc                                                                          <  2:1284770/140‑1 (MQ=255)

                                                                aaaaGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCg                                                                             <  2:527814/135‑1 (MQ=255)

                                                                aaaaGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCg                                                                             >  1:527814/1‑135 (MQ=255)

                                                                 aaaGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCctct                                                                       <  1:226562/140‑1 (MQ=255)

                                                                     cGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCtttta                                                                   >  2:198665/1‑140 (MQ=255)

                                                                     cGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCATGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCtttta                                                                   >  2:1241396/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCTCAAATATGAAGCAATGCGGCCTCttttgtt                                                                 >  2:836043/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCctct                                                                       <  1:1241863/134‑1 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttatt                                                                 >  1:183803/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttatt                                                                 >  2:378255/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttatt                                                                 >  1:453584/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttatt                                                                 >  2:610170/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttatt                                                                 >  1:1359603/1‑140 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCtttta                                                                   <  1:1188912/138‑1 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCtttta                                                                   >  2:1188912/1‑138 (MQ=255)

                                                                       tattatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTACCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCctct                                                                       >  2:1241863/1‑134 (MQ=255)

                                                                        attatCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCttttattt                                                                <  1:1246419/140‑1 (MQ=255)

                                                                             cAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCa                                                           <  1:189835/140‑1 (MQ=255)

                                                                             cAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCa                                                           <  2:208790/140‑1 (MQ=255)

                                                                             cAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCa                                                           <  2:560327/140‑1 (MQ=255)

                                                                                   cGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTc                                                     >  1:811337/1‑140 (MQ=255)

                                                                                      agtaACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTg                                                  >  1:505095/1‑140 (MQ=255)

                                                                                            tGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAg                                                             >  2:952526/1‑123 (MQ=255)

                                                                                            tGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAg                                                             <  1:952526/123‑1 (MQ=255)

                                                                                            tGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTa                                            >  2:616243/1‑140 (MQ=255)

                                                                                             gCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           <  2:183803/140‑1 (MQ=255)

                                                                                             gCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           <  1:1005720/140‑1 (MQ=255)

                                                                                             gCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           <  1:226649/140‑1 (MQ=255)

                                                                                              cGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACt                                          >  2:552820/1‑140 (MQ=255)

                                                                                               gTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGt                                                >  2:1143185/1‑133 (MQ=255)

                                                                                               gTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGt                                                <  1:1143185/133‑1 (MQ=255)

                                                                                                tttGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAg                                                          <  2:1053757/122‑1 (MQ=255)

                                                                                                tttGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAg                                                          >  1:1053757/1‑122 (MQ=255)

                                                                                                tttGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           >  2:20303/1‑137 (MQ=255)

                                                                                                tttGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           <  1:20303/137‑1 (MQ=255)

                                                                                                tttGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTaa                                        >  2:313463/1‑140 (MQ=255)

                                                                                                  tGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTAc                                           >  2:580472/1‑135 (MQ=255)

                                                                                                    ttATGATTAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACttt                                    <  1:378255/140‑1 (MQ=255)

                                                                                                          ttAACATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAg                              <  2:1173675/140‑1 (MQ=255)

                                                                                                              cATCAGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttc                          >  1:1283463/1‑140 (MQ=255)

                                                                                                                  aGTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctgg                      <  1:1241396/140‑1 (MQ=255)

                                                                                                                   gTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctggt                     <  1:592100/140‑1 (MQ=255)

                                                                                                                   gTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctggt                     >  2:469579/1‑140 (MQ=255)

                                                                                                                   gTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctggt                     <  1:270925/140‑1 (MQ=255)

                                                                                                                   gTAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctggt                     >  1:696523/1‑140 (MQ=255)

                                                                                                                    tAACCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttc                          <  1:598542/134‑1 (MQ=255)

                                                                                                                      aCCCACCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctggttcc                  >  2:554439/1‑140 (MQ=255)

                                                                                                                          aCCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCtt              <  2:1109870/140‑1 (MQ=255)

                                                                                                                          aCCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCtt              <  2:1283463/140‑1 (MQ=255)

                                                                                                                          aCCGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCtt              <  2:570513/140‑1 (MQ=255)

                                                                                                                           ccGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAggttcctgg                      <  1:1350130/131‑1 (MQ=255)

                                                                                                                           ccGGAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTta             >  2:468381/1‑140 (MQ=255)

                                                                                                                              gAAAACGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTtaata          >  1:644670/1‑140 (MQ=255)

                                                                                                                                 aaCGCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACa       <  2:518637/140‑1 (MQ=255)

                                                                                                                                    gCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACaaaa    <  1:554439/140‑1 (MQ=255)

                                                                                                                                    gCCCGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACaaaa    <  1:1108297/140‑1 (MQ=255)

                                                                                                                                      ccGTGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACAAAAcc  <  1:610170/140‑1 (MQ=255)

CATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGTAGTAACTGCGTTTGTTATGATTAACATCAGTAACCCACCGGAAAACGCCCGCGCCTGCCAGTGTTGAACAGTATTCCCGAAATGTAGATTTTCCGCAAATATGAAGCAATGCGGCCTCTTTTATTTTAGCAGGGTTCTTGGTCGTACTAACTTTTAACAGGTTCCTGGTTCCTCTTAATAACAAAACC  >  NC_000913/1212679‑1212952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`