New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 375203 =NA (NA)31 (0.590) 14/216 2.3 NA noncoding (17/36 nt) other REP31f
?NC_000913 377351 = NA (NA)noncoding (16/37 nt) other REP32a

Only 100 of 187 total aligned reads displayed.

TGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATG  >  NC_000913/375068‑375341
                                                                                                                                        |                                                                                                                                          
tGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCg                                                                                                                                        <  1:1069766/140‑1 (MQ=40)
 ggCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGt                                                                                                                                       >  1:676453/1‑140 (MQ=40)
   cgcgGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCg                                                                                                                                     <  2:468258/140‑1 (MQ=40)
   cgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTc                                                                                                                                      <  2:421184‑M1/7‑1 (MQ=255)
    gcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCg                                                                                                                                     >  2:296279‑M1/133‑140 (MQ=255)
     cgGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCa                                                                                                                                   <  2:197081/140‑1 (MQ=40)
      gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                                                                                                                                  <  2:737549‑M1/112‑1 (MQ=255)
      gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                                                                                                                                  <  1:213337‑M1/112‑1 (MQ=255)
      gggAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCATAGCGTCGCa                                                                                                                                   >  2:310854/1‑140 (MQ=255)
      ccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCa                                                                                                                                   <  1:315770‑M1/10‑1 (MQ=255)
       gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                                                                                 >  1:793050/8‑140 (MQ=255)
       gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                                                                                 >  1:611840/8‑140 (MQ=255)
       gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                                                                                 <  1:508393/133‑1 (MQ=255)
       gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                                                                                 >  1:315526/8‑140 (MQ=255)
        taagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                                                                                                                                >  2:771105/7‑140 (MQ=255)
        gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATc                                                                                                                                 <  1:972846‑M1/12‑1 (MQ=255)
        gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATc                                                                                                                                 <  1:537032‑M1/12‑1 (MQ=255)
        gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATc                                                                                                                                 <  2:1077316‑M1/12‑1 (MQ=255)
        gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATc                                                                                                                                 <  2:676897‑M1/12‑1 (MQ=255)
        gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATc                                                                                                                                 <  1:349722‑M1/12‑1 (MQ=255)
          aagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAgg                                                                                                                              >  2:323999‑M1/106‑140 (MQ=255)
                taggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCt                                                                                                                         <  2:425087‑M1/20‑1 (MQ=255)
                aGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTg                                                                                                                        <  2:916570/140‑1 (MQ=37)
                 ggCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                                                                                                                       <  2:315526/140‑1 (MQ=37)
                 ggCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                                                                                                                       <  2:268768/140‑1 (MQ=37)
                   gcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTgcg                                                                                                                      >  1:19335‑M1/118‑140 (MQ=255)
                     ctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCa                                                                                                                    >  2:206742‑M1/116‑140 (MQ=255)
                     ctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCa                                                                                                                    >  1:533212‑M1/116‑140 (MQ=255)
                       gataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACg                                                                                                                  >  1:472627‑M1/114‑140 (MQ=255)
                       gataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACg                                                                                                                  >  2:659317‑M1/114‑140 (MQ=255)
                       aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                 <  1:907904/140‑1 (MQ=34)
                       aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                 <  2:74085/140‑1 (MQ=34)
                        ataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                 <  2:577720‑M1/28‑1 (MQ=255)
                             acgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                 <  1:663042‑M1/28‑1 (MQ=255)
                                        gtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacgacgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCcggatgcgataaa                                                                                                <  2:1014111‑M1/65‑6 (MQ=255)
                                         tcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTa                                                                                                <  1:703693‑M1/45‑1 (MQ=255)
                                         tcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCACACGACTGCcggatgcgataaa                                                                                                <  1:208474‑M1/45‑6 (MQ=255)
                                          CATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTaaa                                                                                              <  1:150246‑M1/140‑1 (MQ=255)
                                           gcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCACACGACTgccggatgcgataaacg                                                                                              <  1:258054‑M1/47‑8 (MQ=255)
                                                 gataatagcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTa                                                                                       >  1:109600/8‑140 (MQ=255)
                                                  ATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTAt                                                                                      <  2:286581‑M1/140‑1 (MQ=255)
                                                   TCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATc                                                                                     >  2:587426‑M1/1‑140 (MQ=255)
                                                   TCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATc                                                                                     >  2:957487‑M1/1‑140 (MQ=255)
                                                    CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATcc                                                                                    >  1:330386‑M1/1‑140 (MQ=255)
                                                     TGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCg                                                                                   <  2:352945‑M1/140‑1 (MQ=255)
                                                      GCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                                  >  1:895545‑M1/1‑140 (MQ=255)
                                                          aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTa                                                                              >  2:22827/1‑140 (MQ=37)
                                                          ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                                              <  2:227428‑M1/140‑1 (MQ=255)
                                                           cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCATGGCGCACGACTGCCGGATGCGGCGtga                                                                                               <  1:575211/122‑3 (MQ=11)
                                                           cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTAc                                                                             >  1:929704/1‑140 (MQ=37)
                                                            cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                                             <  1:584426‑M1/64‑1 (MQ=255)
                                                            cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                                             <  1:1052809‑M1/64‑1 (MQ=255)
                                                            cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGA‑‑TAAACGTCTTGTCCGGCCtacat                                                                           <  1:8386‑M1/64‑3 (MQ=255)
                                                             gactgccgggtgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGc                                                                                           <  1:928876‑M1/70‑1 (MQ=255)
                                                             gactgccgggtgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGc                                                                                           >  2:928876‑M1/55‑124 (MQ=255)
                                                             gactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGA‑‑TAAACGTCTTGTCCGGCctacatt                                                                          <  1:571298‑M1/65‑4 (MQ=255)
                                                             ACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACgg                                                                           <  2:143670‑M1/140‑1 (MQ=255)
                                                              CTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGa                                                                          <  2:23561‑M1/140‑1 (MQ=255)
                                                                tgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCATACGACTGCCGGATGCGA‑‑TAAACGTCTTGTCcggcctacatttcgc                                                                      <  1:412614‑M1/89‑8 (MQ=255)
                                                                 ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTAcacttcg                                                                       <  1:476013/140‑7 (MQ=255)
                                                                 ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATgg                                                                       >  2:575010/1‑140 (MQ=40)
                                                                  cGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgc                                                                      <  1:23561/140‑1 (MQ=40)
                                                                   ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     <  1:418767/140‑1 (MQ=40)
                                                                   ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     <  2:389581/140‑1 (MQ=40)
                                                                   cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgc                                                                      >  1:744242‑M1/70‑140 (MQ=255)
                                                                    ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     >  2:275238‑M1/69‑140 (MQ=255)
                                                                    ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     >  1:1048822‑M1/69‑140 (MQ=255)
                                                                    ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     >  2:841371‑M1/69‑140 (MQ=255)
                                                                    ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                     >  1:242189‑M1/69‑140 (MQ=255)
                                                                        cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                <  1:771105/140‑1 (MQ=40)
                                                                        cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                <  2:61292/140‑1 (MQ=40)
                                                                        cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGATGGCGCGGGa                                                                <  2:41348/140‑1 (MQ=255)
                                                                         cggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                >  2:397814‑M1/64‑140 (MQ=255)
                                                                              tgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                           >  2:1052809‑M1/59‑140 (MQ=255)
                                                                                      ttatcaggcctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                           >  2:12831‑M1/51‑132 (MQ=255)
                                                                                      ttatcaggcctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                           <  1:12831‑M1/82‑1 (MQ=255)
                                                                                         tccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                               >  2:755689‑M1/27‑140 (MQ=255)
                                                                                         tccggcctacacttcgcccgtaagccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                               >  1:548389‑M1/27‑140 (MQ=255)
                                                                                          cGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAg                                              <  2:683747/140‑1 (MQ=40)
                                                                                           ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                                             <  1:683738/140‑1 (MQ=40)
                                                                                              tctacacttcgcccataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                                             <  1:304163‑M1/116‑1 (MQ=255)
                                                                                                 cGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGtt                                       <  1:356693/140‑1 (MQ=40)
                                                                                                 acacttcgcccgtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCATCTGCGCACGACCGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                               >  1:937411‑M1/40‑133 (MQ=255)
                                                                                                      ggCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGt                                  <  2:243153/140‑1 (MQ=37)
                                                                                                      ggCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGt                                  <  2:372011/140‑1 (MQ=37)
                                                                                                       cgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                                             <  2:522179‑M1/96‑1 (MQ=255)
                                                                                                            gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                               <  2:543236‑M1/94‑1 (MQ=255)
                                                                                                            ataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                            <  2:152678‑M1/133‑1 (MQ=255)
                                                                                                            ataaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                            <  1:1082236‑M1/133‑1 (MQ=255)
                                                                                                             taaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                            <  2:673633‑M1/113‑1 (MQ=255)
                                                                                                             taaaccGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                                            <  1:439412‑M1/117‑1 (MQ=255)
                                                                                                                  tGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAt                      <  1:717669/140‑1 (MQ=34)
                                                                                                                  tGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAt                      <  1:396497/140‑1 (MQ=34)
                                                                                                                         CTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGcaca               <  2:875348‑M1/140‑1 (MQ=255)
                                                                                                                            ATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAt                                                                                                        <  1:1111002‑M1/48‑1 (MQ=255)
                                                                                                                            ATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAt                                                                                                        >  2:1111002‑M1/1‑48 (MQ=255)
                                                                                                                                   GCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCgg     >  2:109600‑M1/1‑140 (MQ=255)
                                                                                                                                    CGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGa    >  2:611840‑M1/1‑140 (MQ=255)
                                                                                                                                     GTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGAt   >  2:793050‑M1/1‑140 (MQ=255)
                                                                                                                                       ttAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATg  >  1:641063/1‑140 (MQ=34)
                                                                                                                                        |                                                                                                                                          
TGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATG  >  NC_000913/375068‑375341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.