Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,364,285 G→C T253S (ACC→AGC)  dsbD ← protein disulfide oxidoreductase ‑ DsbDreduced

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,364,2850GC100.0% 230.0 / NA 61T253S (ACC→AGC) dsbDprotein disulfide oxidoreductase ‑ DsbDreduced
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (28/33);  total (28/33)

TCCGGCAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGGTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACATAAATAAAGGTC  >  NC_000913/4364149‑4364416
                                                                                                                                        |                                                                                                                                   
tCCGGCAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTaa                                                                                                                                  >  1:631390/1‑140 (MQ=255)
 ccGGCAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTaaa                                                                                                                                 <  2:844582/140‑1 (MQ=255)
     cAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACg                                                                                                                             <  1:636408/140‑1 (MQ=255)
     cAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACg                                                                                                                             <  1:54824/140‑1 (MQ=255)
          gCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGc                                                                                                                        >  2:5909/1‑140 (MQ=255)
          gCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGc                                                                                                                        <  2:962734/140‑1 (MQ=255)
          gCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGc                                                                                                                        >  1:296950/1‑140 (MQ=255)
                   acatacaCACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCGGCAAGCTAAAGACGATGGCGAGGCCAAt                                                                                                               <  2:291608/140‑1 (MQ=255)
                     aaacaCACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGa                                                                                                             <  2:876529/140‑1 (MQ=255)
                       acacacCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGc                                                                                                           >  2:1013602/1‑140 (MQ=255)
                           acCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGt                                                                                                       <  1:5909/140‑1 (MQ=255)
                             cGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTAt                                                                                                     <  2:278781/140‑1 (MQ=255)
                                cAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATggg                                                                                                  <  1:7904/140‑1 (MQ=255)
                                          gccCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAgcg                                                                                        <  1:156136/140‑1 (MQ=255)
                                            ccTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATggg                                                                                                  >  2:725042/1‑128 (MQ=255)
                                            ccTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATggg                                                                                                  <  1:725042/128‑1 (MQ=255)
                                            ccTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGcgcc                                                                                      <  1:22596/140‑1 (MQ=255)
                                             cTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGcgccg                                                                                     >  1:951261/1‑140 (MQ=255)
                                               gTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGAGGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCgccgcc                                                                                   <  2:37867/140‑1 (MQ=255)
                                                  ggCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTgg                                                                                <  1:905994/140‑1 (MQ=255)
                                                      aTTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACt                                                                            >  2:456614/1‑140 (MQ=255)
                                                          cTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCgccgcc                                                                                   >  2:3565/1‑129 (MQ=255)
                                                          cTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCgccgcc                                                                                   <  1:3565/129‑1 (MQ=255)
                                                          cTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTaa                                                                        >  1:478547/1‑140 (MQ=255)
                                                                  cGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTgcgg                                                                <  2:296950/140‑1 (MQ=255)
                                                                           tgtTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAacca                                                       >  1:51480/1‑140 (MQ=255)
                                                                            gtTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAaccac                                                      >  1:5714/1‑140 (MQ=255)
                                                                             tttGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAaccacc                                                     <  2:51480/140‑1 (MQ=255)
                                                                             tttGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAaccacc                                                     >  1:1011818/1‑140 (MQ=255)
                                                                                   gCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGAccc                                               >  2:335988/1‑140 (MQ=255)
                                                                                    cGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCa                                              >  2:298023/1‑140 (MQ=255)
                                                                                     gAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAg                                             <  1:57603/140‑1 (MQ=255)
                                                                                     gAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAg                                             >  1:36712/1‑140 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAATACGATGGCGAGGCCAATGAGCACGTATGTGTGCTGTAGCGCCTCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  2:257707/140‑1 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  2:62840/140‑1 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           >  2:502759/1‑140 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  2:892294/140‑1 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  2:860961/140‑1 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  1:267694/140‑1 (MQ=255)
                                                                                       agagGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgcg                                           <  2:951261/140‑1 (MQ=255)
                                                                                         agGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGcc                                         >  2:1095563/1‑140 (MQ=255)
                                                                                            ggAGTTGCAGGGTAAACAAGCCAATCATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCgtg                                      <  1:508097/140‑1 (MQ=255)
                                                                                                ttGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgc                                            >  2:492230/1‑130 (MQ=255)
                                                                                                ttGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAgc                                            <  1:492230/130‑1 (MQ=255)
                                                                                                ttGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAgg                                  >  2:381184/1‑140 (MQ=255)
                                                                                                 tGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGt                                 <  1:502759/140‑1 (MQ=255)
                                                                                                        tAAACAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGcc                          <  2:631390/140‑1 (MQ=255)
                                                                                                           aCAAGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATc                       >  2:360800/1‑140 (MQ=255)
                                                                                                             aaGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATccc                     <  2:729383/140‑1 (MQ=255)
                                                                                                             aaGCCAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATccc                     >  2:38304/1‑140 (MQ=255)
                                                                                                                ccAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTg                  >  1:105885/1‑140 (MQ=255)
                                                                                                                ccAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTg                  >  2:612322/1‑140 (MQ=255)
                                                                                                                 cAAACATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGc                 >  2:313687/1‑140 (MQ=255)
                                                                                                                   aaCATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCACCCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGcac               <  2:1011818/140‑1 (MQ=255)
                                                                                                                    aCATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGcc                          >  2:404206/1‑128 (MQ=255)
                                                                                                                    aCATTGACATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGcc                          <  1:404206/128‑1 (MQ=255)
                                                                                                                          aCATCGCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACataaata        <  1:335988/140‑1 (MQ=255)
                                                                                                                               gCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTg                  <  2:1116676/125‑1 (MQ=255)
                                                                                                                               gCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTg                  >  1:1116676/1‑125 (MQ=255)
                                                                                                                               gCCAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACATAAATAAAGGt   >  1:909400/1‑140 (MQ=255)
                                                                                                                                ccAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACATAAATAAAGGTc  >  2:340144/1‑140 (MQ=255)
                                                                                                                                ccAGCAAGCTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACATAAATAAAGGTc  <  2:105885/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                   
TCCGGCAATCGCCCCCATAACAAACACACCGCCAGGTGAGCCGCCCTGTTGGCGATTGCTCATCAACGTGAGACGTGTTTGCAGCGAAGAGGGGAGTTGCAGGGTAAACAAGCCAAACATTGACATCGCCAGCAAGGTAAAGACGATGGCGAGGCCAATGAGCACGTATGGGTGCTGTAGCGCCGCCTGGAACTGTAACCCTGCGGCGGCAACCACCAGACCCAGCGCCGTGTAGGTCAGCGCCATCCCCTGCACATAAATAAAGGTC  >  NC_000913/4364149‑4364416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: