Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,436,731	T→C	S55G (AGC→GGC)	ompN ←	outer membrane porin N

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,436,731	0	T	C	100.0%	265.2 / NA	70	S55G (AGC→GGC)	ompN	outer membrane porin N
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/32);  total (38/32)

GCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCTCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAGCAGGG  >  NC_000913/1436601‑1436859                                                                                                                                   |                                                                                                                                 gCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGcc                                                                                                                         >  2:888331/1‑140 (MQ=255) gCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGcc                                                                                                                         <  2:122554/140‑1 (MQ=255)    aGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATc                                                                                                                      <  1:113168/140‑1 (MQ=255)    aGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATc                                                                                                                      <  2:275137/140‑1 (MQ=255)      aCGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCtt                                                                                                                    >  1:534315/1‑140 (MQ=255)          gTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGc                                                                                                                >  1:744055/1‑140 (MQ=255)          gTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGc                                                                                                                >  1:896663/1‑140 (MQ=255)             cATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGa                                                                                                             >  2:975130/1‑140 (MQ=255)                gACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAAtt                                                                                                          >  2:557601/1‑140 (MQ=255)                  cTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTAt                                                                                                        <  2:747025/140‑1 (MQ=255)                     gTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTAt                                                                                                        <  1:478492/137‑1 (MQ=255)                     gTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTAt                                                                                                        >  2:478492/1‑137 (MQ=255)                     gTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAg                                                                                                     <  1:975130/140‑1 (MQ=255)                     gTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAg                                                                                                     >  1:236417/1‑140 (MQ=255)                     gTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAg                                                                                                     <  1:888331/140‑1 (MQ=255)                                aTTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGc                                                                                          >  2:1039641/1‑140 (MQ=255)                                aTTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGc                                                                                          >  1:202474/1‑140 (MQ=255)                                  tCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAg                                                                                        <  2:236417/140‑1 (MQ=255)                                  tCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAg                                                                                        <  1:127342/140‑1 (MQ=255)                                    aGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGc                                                                                      >  1:997010/1‑140 (MQ=255)                                      tgttgtTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCa                                                                                    <  2:744055/140‑1 (MQ=255)                                       gttgttTGAATGCATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGAGTTTCGCCTTTAAAGCCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCAt                                                                                   <  2:710708/140‑1 (MQ=255)                                          gttTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCaa                                                                                >  1:714013/1‑140 (MQ=255)                                          gttTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCaa                                                                                <  2:333040/140‑1 (MQ=255)                                          gttTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCaa                                                                                <  1:1132557/140‑1 (MQ=255)                                           tttGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAAc                                                                               >  2:1135190/1‑140 (MQ=255)                                               ccTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTg                                                                           <  1:1039641/140‑1 (MQ=255)                                                cTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGc                                                                          >  1:72645/1‑140 (MQ=255)                                                    atatTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATa                                                                      <  1:647176/140‑1 (MQ=255)                                                    atatTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATa                                                                      <  1:455497/140‑1 (MQ=255)                                                    atatTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATa                                                                      <  2:169558/140‑1 (MQ=255)                                                             tCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTaa                                                             >  2:1005043/1‑140 (MQ=255)                                                             tCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTaa                                                             >  2:520269/1‑140 (MQ=255)                                                                 aTTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATa                                                                      >  2:480921/1‑127 (MQ=255)                                                                 aTTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATa                                                                      <  1:480921/127‑1 (MQ=255)                                                                 aTTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATttg                                                         >  2:938986/1‑140 (MQ=255)                                                                  ttGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCa                                                                        <  1:487105/124‑1 (MQ=255)                                                                  ttGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCa                                                                        >  2:487105/1‑124 (MQ=255)                                                                    gACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATttgttg                                                      >  1:499787/1‑140 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGt                                                  >  1:198944/1‑139 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGt                                                  <  2:198944/139‑1 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTc                                                 >  2:654291/1‑140 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTc                                                 >  2:953577/1‑140 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTc                                                 >  1:430564/1‑140 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTc                                                 >  2:5358/1‑140 (MQ=255)                                                                         tAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTc                                                 >  2:607792/1‑140 (MQ=255)                                                                          aGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCt                                                <  2:714013/140‑1 (MQ=255)                                                                          aGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCt                                                <  2:997010/140‑1 (MQ=255)                                                                          aGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCt                                                <  1:520269/140‑1 (MQ=255)                                                                           gCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGcc                                                    <  1:207105/135‑1 (MQ=255)                                                                           gCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGcc                                                    >  2:207105/1‑135 (MQ=255)                                                                                 gAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTtattat                                         >  1:974165/1‑140 (MQ=255)                                                                                 gAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTtattat                                         >  1:531943/1‑140 (MQ=255)                                                                                     tGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAAc                                     >  2:954581/1‑140 (MQ=255)                                                                                         cGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCg                                 <  1:1005043/140‑1 (MQ=255)                                                                                           ttAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGc                               <  1:5358/140‑1 (MQ=255)                                                                                            tAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCt                              >  2:520012/1‑140 (MQ=255)                                                                                            tAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCt                              >  1:557333/1‑140 (MQ=255)                                                                                              aTTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGc                            >  2:374591/1‑140 (MQ=255)                                                                                              aTTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGc                            >  2:1032862/1‑140 (MQ=255)                                                                                                 tGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCAtg                         >  2:603452/1‑140 (MQ=255)                                                                                                  gggTTTCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCAtgt                        >  1:934241/1‑140 (MQ=255)                                                                                                   ggTTTCGCCTTTAATACCCAGACGCGCATAAACCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCCGGCCGTCAACTTTGCCATCCCGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGCCTGCAtgcg                       >  2:450631/1‑138 (MQ=37)                                                                                                       tCGCCTTTAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTgcagc                   >  2:293458/1‑140 (MQ=255)                                                                                                              tAAAACCCAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTgcg            >  1:551995/1‑140 (MQ=255)                                                                                                                   cccAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAg       <  1:603452/140‑1 (MQ=255)                                                                                                                   cccAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAg       <  2:896663/140‑1 (MQ=255)                                                                                                                   cccAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAg       <  1:293458/140‑1 (MQ=255)                                                                                                                    ccAGACGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAgc      <  2:430564/140‑1 (MQ=255)                                                                                                                        aCGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAgcaggg  <  1:954581/140‑1 (MQ=255)                                                                                                                        aCGCGCATAGCCCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAgcaggg  <  2:499787/140‑1 (MQ=255)                                                                                                                                   |                                                                                                                                 GCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATCGTTAATTTGGGTTTCGCCTTTAAAACCCAGACGCGCATAGCTCTGGTCGCCATCTTTCGCTGAATTATCAGAAAAATAATGCAGGCCATCAACTTTGCCATACAGATCTAATTTGTTGCCGTCTTTATTATAAACTTCGGCTGCATGTGCAGCACCTGCGGCGAGCAGGG  >  NC_000913/1436601‑1436859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑