BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,456,234	A→G	intergenic (‑588/+93)	yfcV ← / ← sixA	putative fimbrial protein YfcV/phosphohistidine phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,456,234	0	A	G	100.0%	383.0 / NA	102	intergenic (‑588/+93)	yfcV/sixA	putative fimbrial protein YfcV/phosphohistidine phosphatase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (47/55); total (47/55)

Only 100 of 104 total aligned reads displayed.

ATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTGC  >  NC_000913/2456098‑2456369

aTCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTc                                                                                                                                      <  2:649343/140‑1 (MQ=255)

  cTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCtt                                                                                                                                    <  2:240207/140‑1 (MQ=255)

  cTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCtt                                                                                                                                    <  1:493643/140‑1 (MQ=255)

     tATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGa                                                                                                                                 <  2:388415/140‑1 (MQ=255)

     tATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGa                                                                                                                                 <  2:578182/140‑1 (MQ=255)

      aTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAt                                                                                                                                >  2:964433/1‑140 (MQ=255)

      aTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAt                                                                                                                                >  1:400339/1‑140 (MQ=255)

      aTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAt                                                                                                                                >  1:331870/1‑140 (MQ=255)

        taataaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAtag                                                                                                                              <  1:9283/140‑1 (MQ=255)

           taaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAtagtag                                                                                                                           >  1:586562/1‑140 (MQ=255)

           taaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAtagtag                                                                                                                           >  1:644314/1‑140 (MQ=255)

           taaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGAtagtag                                                                                                                           >  1:292791/1‑140 (MQ=255)

             aaTGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTg                                                                                                                         <  2:586562/140‑1 (MQ=255)

               tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAg                                                                                                                       >  2:751339/1‑140 (MQ=255)

               tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAg                                                                                                                       >  1:927277/1‑140 (MQ=255)

                  tAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGtt                                                                                                                    <  2:331870/140‑1 (MQ=255)

                    aTGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGa                                                                                                                  <  2:644314/140‑1 (MQ=255)

                    aTGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGa                                                                                                                  <  2:1018512/140‑1 (MQ=255)

                    aTGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGa                                                                                                                  <  2:927277/140‑1 (MQ=255)

                    aTGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGa                                                                                                                  <  1:232013/140‑1 (MQ=255)

                       aGTGTCAAACAGACATTATTCATTTCAACATGAAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGGGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAg                                                                                                               >  2:133525/1‑140 (MQ=255)

                        gggtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTAGATAGTAGTGAGGTTGACAGa                                                                                                              >  2:1034960/3‑140 (MQ=255)

                         tgtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGat                                                                                                             >  2:757988/1‑140 (MQ=255)

                         tgtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGat                                                                                                             >  2:103313/1‑140 (MQ=255)

                          gtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGata                                                                                                            >  2:208674/1‑140 (MQ=255)

                           tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAg                                                                                                               >  2:758517/1‑136 (MQ=255)

                           tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAg                                                                                                               <  1:758517/136‑1 (MQ=255)

                           tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGatat                                                                                                           <  1:1034960/140‑1 (MQ=255)

                           tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGatat                                                                                                           >  2:586190/1‑140 (MQ=255)

                           tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGatat                                                                                                           <  1:1081532/140‑1 (MQ=255)

                             aaaCAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATcc                                                                                                         >  1:264382/1‑140 (MQ=255)

                                cAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCt                                                                                                      <  2:301240/140‑1 (MQ=255)

                                   aCATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGcc                                                                                                   >  2:50737/1‑140 (MQ=255)

                                     attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 <  1:103313/140‑1 (MQ=255)

                                     attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 <  2:433722/140‑1 (MQ=255)

                                     attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 >  2:789545/1‑140 (MQ=255)

                                     attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 >  2:64140/1‑140 (MQ=255)

                                     attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 >  1:787857/1‑140 (MQ=255)

                                         ttCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtgatga                                                                                             >  1:578543/1‑140 (MQ=255)

                                         ttCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtgatga                                                                                             >  1:254354/1‑140 (MQ=255)

                                          tCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAg                                                                                            <  1:789545/140‑1 (MQ=255)

                                          tCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAg                                                                                            <  1:64140/140‑1 (MQ=255)

                                             tttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCaa                                                                                         >  2:384004/1‑140 (MQ=255)

                                              ttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 <  1:1036432/131‑1 (MQ=255)

                                              ttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 <  1:912680/131‑1 (MQ=255)

                                              ttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                                                                 >  2:912680/1‑131 (MQ=255)

                                              ttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAAt                                                                                        >  1:8116/1‑140 (MQ=255)

                                               tCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAAtt                                                                                       >  2:264910/1‑140 (MQ=255)

                                                  aCATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATg                                                                                    <  2:400339/140‑1 (MQ=255)

                                                   cATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGc                                                                                   >  2:1040926/1‑140 (MQ=255)

                                                       tAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCaa                                                                               <  1:264910/140‑1 (MQ=255)

                                                        aaCTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAAt                                                                              <  1:208674/140‑1 (MQ=255)

                                                        aaCTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAAt                                                                              >  1:681958/1‑140 (MQ=255)

                                                        aaCTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAAt                                                                              <  2:787857/140‑1 (MQ=255)

                                                          cTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGa                                                                            <  2:631717/140‑1 (MQ=255)

                                                            ttGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                                                          <  2:936825/140‑1 (MQ=255)

                                                             tGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                                                          >  2:595081/1‑139 (MQ=255)

                                                             tGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                                                          <  1:595081/139‑1 (MQ=255)

                                                             tGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATc                                                                         >  1:651872/1‑140 (MQ=255)

                                                             tGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATc                                                                         >  1:677121/1‑140 (MQ=255)

                                                               ggCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGGAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGCTAGTAGTGAGGTTGACATATATCCGCTGACTGATGAGCACTTATGCCCAATGAATCTa                                                                       >  2:231342/1‑140 (MQ=255)

                                                               ggCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGccc                                                                                 >  1:399358/1‑130 (MQ=255)

                                                               ggCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGccc                                                                                 <  2:399358/130‑1 (MQ=255)

                                                               ggCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTa                                                                       >  2:1037939/1‑140 (MQ=255)

                                                                 cAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTAcc                                                                     >  1:1025209/1‑140 (MQ=255)

                                                                    aaTCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCa                                                                  <  1:1037939/140‑1 (MQ=255)

                                                                    aaTCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCa                                                                  <  2:264382/140‑1 (MQ=255)

                                                                          gATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGc                                                            <  1:57891/140‑1 (MQ=255)

                                                                              cgcgCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCa                                                           <  1:564240/137‑1 (MQ=255)

                                                                              cgcgCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCa                                                           >  2:564240/1‑137 (MQ=255)

                                                                                cgcAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAtt                                                      >  2:341406/1‑140 (MQ=255)

                                                                                cgcAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAtt                                                      >  1:785841/1‑140 (MQ=255)

                                                                                cgcAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAtt                                                      >  1:899995/1‑140 (MQ=255)

                                                                                cgcAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAtt                                                      <  2:303422/140‑1 (MQ=255)

                                                                                    gaagaaTACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGa                                                  <  1:757988/140‑1 (MQ=255)

                                                                                    gaagaaTACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGa                                                  <  1:681512/140‑1 (MQ=255)

                                                                                    gaagaaTACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGa                                                  <  2:651872/140‑1 (MQ=255)

                                                                                      agaaTACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAttgctcat                                                <  1:384004/140‑7 (MQ=255)

                                                                                        aaTACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACtc                                              <  2:899995/140‑1 (MQ=255)

                                                                                              ttCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGa                                        <  2:8116/140‑1 (MQ=255)

                                                                                               tCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGAt                                       >  2:474147/1‑140 (MQ=255)

                                                                                               tCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGAt                                       >  1:773492/1‑140 (MQ=255)

                                                                                               tCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGAt                                       >  2:316361/1‑140 (MQ=255)

                                                                                                         aGTTAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGcc                             <  1:751339/140‑1 (MQ=255)

                                                                                                           ttAAAGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCAt                           <  2:835871/140‑1 (MQ=255)

                                                                                                             aaaGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCt                         <  2:876454/140‑1 (MQ=255)

                                                                                                             aaaGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCt                         <  1:474147/140‑1 (MQ=255)

                                                                                                             aaaGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCt                         <  1:1040926/140‑1 (MQ=255)

                                                                                                             aaaGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCt                         <  2:292791/140‑1 (MQ=255)

                                                                                                             aaaGGTGTTTTATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCt                         <  2:785841/140‑1 (MQ=255)

                                                                                                                    ttttATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGAtt                  >  2:352064/1‑140 (MQ=255)

                                                                                                                    ttttATTTATAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGAtt                  >  1:248161/1‑140 (MQ=255)

                                                                                                                      ttatttatAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTac                <  2:681958/140‑1 (MQ=255)

                                                                                                                       tatttatAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTaca               <  2:1025209/140‑1 (MQ=255)

                                                                                                                         tttatAGATGGGGAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACg             <  1:316361/140‑1 (MQ=255)

                                                                                                                                  ggggAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCt    >  2:125057/1‑140 (MQ=255)

                                                                                                                                   gggAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTg   >  2:720297/1‑140 (MQ=255)

                                                                                                                                   gggAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTg   >  1:371604/1‑140 (MQ=255)

                                                                                                                                    ggAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTGc  <  2:773492/140‑1 (MQ=255)

                                                                                                                                    ggAGGGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTGc  >  1:62857/1‑140 (MQ=255)

ATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATCAGATAGCTTTTGCCATCTTCAGATTACACGGGCTCATCTGC  >  NC_000913/2456098‑2456369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`