Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,650,680	(C)7→6	intergenic (+18/‑611)	arsC → / → yhiS	arsenate reductase/putative uncharacterized protein YhiS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,650,674	0	C	.	100.0%	342.1 / NA	79	intergenic (+12/‑617)	arsC/yhiS	arsenate reductase/putative uncharacterized protein YhiS
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (36/43);  total (36/43)

CGCTGGGAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCA  >  NC_000913/3650535‑3650808                                                                                                                                            |                                                                                                                                       cgcTGGGAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATc                                                                                                                                        <  1:230515/140‑1 (MQ=255)     gggAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATccccc                                                                                                                                    >  1:452638/1‑140 (MQ=255)          cTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATccccccacag                                                                                                                               <  1:482821/140‑5 (MQ=255)            cGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGgt                                                                                                                            <  1:888303/140‑1 (MQ=255)                tgtgCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGgttgtt                                                                                                                        >  1:674795/1‑140 (MQ=255)                 gtgCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTa                                                                                                                       >  1:894214/1‑140 (MQ=255)                 gtgCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTa                                                                                                                       <  1:82768/140‑1 (MQ=255)                  tgCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAg                                                                                                                      >  1:188784/1‑140 (MQ=255)                  tgCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAg                                                                                                                      >  2:244620/1‑140 (MQ=255)                       cccTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAg                                                                                                                 >  2:731104/1‑140 (MQ=255)                          ttCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgc                                                                                                              <  1:417493/140‑1 (MQ=255)                          ttCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgc                                                                                                              <  1:344952/140‑1 (MQ=255)                           tCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgcg                                                                                                             <  1:666779/140‑1 (MQ=255)                            cAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgcgc                                                                                                            <  2:661965/140‑1 (MQ=255)                             aGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCt                                                                                                           <  1:205226/140‑1 (MQ=255)                             aGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCt                                                                                                           <  2:452638/140‑1 (MQ=255)                             aGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCt                                                                                                           <  2:805342/140‑1 (MQ=255)                                 gtggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgcgc                                                                                                            <  2:476952/135‑1 (MQ=255)                                 gtggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTgcgc                                                                                                            >  1:476952/1‑135 (MQ=255)                                 gtggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCtttat                                                                                                       >  2:846/1‑140 (MQ=255)                                  tggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGt                                                                                                                >  2:95605/1‑130 (MQ=255)                                  tggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGt                                                                                                                <  1:95605/130‑1 (MQ=255)                                  tggtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCtttatt                                                                                                      <  1:95181/140‑1 (MQ=255)                                    gtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCtttattta                                                                                                    >  2:784066/1‑140 (MQ=255)                                    gtgCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCtttattta                                                                                                    >  1:902644/1‑140 (MQ=255)                                         ggAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCg                                                                                               >  2:819100/1‑140 (MQ=255)                                            aaTTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGAt                                                                                            >  1:202959/1‑140 (MQ=255)                                                 tGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGAc                                                                                       >  2:841640/1‑140 (MQ=255)                                                   ccAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGc                                                                                     >  2:270888/1‑140 (MQ=255)                                                      gATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTgg                                                                                  <  1:846/140‑1 (MQ=255)                                                      gATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTgg                                                                                  <  2:902644/140‑1 (MQ=255)                                                       aTGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGgc                                                                                 >  2:496223/1‑140 (MQ=255)                                                                aaGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTAt                                                                        <  2:208050/140‑1 (MQ=255)                                                                 aGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                       >  1:920152/1‑140 (MQ=255)                                                                   gcgcATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCg                                                                     <  2:920152/140‑1 (MQ=255)                                                                    cgcATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGa                                                                    >  1:13897/1‑140 (MQ=255)                                                                       aTTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                 >  1:844940/1‑140 (MQ=255)                                                                          ctcCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCtgca                                                              <  1:841640/140‑4 (MQ=255)                                                                          ctcCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCa                                                              <  1:139205/140‑1 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCtgca                                                              <  1:593235/129‑4 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCtg                                                                <  2:38330/127‑2 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCtg                                                                >  1:38330/1‑126 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCa                                                              >  2:593235/1‑129 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  1:702770/1‑140 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  1:350386/1‑140 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  2:336290/1‑140 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  2:859933/1‑140 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  1:849499/1‑140 (MQ=255)                                                                                     aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa                                                   >  1:453077/1‑140 (MQ=255)                                                                                          gagaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCg                                              <  2:350386/140‑1 (MQ=255)                                                                                          gagaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCg                                              <  1:244620/140‑1 (MQ=255)                                                                                           agaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGa                                             <  2:894214/140‑1 (MQ=255)                                                                                           agaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGa                                             >  1:702157/1‑140 (MQ=255)                                                                                            gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            >  1:433320/1‑140 (MQ=255)                                                                                            gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            <  2:433320/140‑1 (MQ=255)                                                                                            gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            <  1:819100/140‑1 (MQ=255)                                                                                            gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            <  2:13897/140‑1 (MQ=255)                                                                                            gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            >  1:110600/1‑140 (MQ=255)                                                                                               aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa                                         <  1:731104/140‑1 (MQ=255)                                                                                               aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa                                         >  2:577310/1‑140 (MQ=255)                                                                                               aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa                                         <  2:849499/140‑1 (MQ=255)                                                                                               aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa                                         <  2:110600/140‑1 (MQ=255)                                                                                                gTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAAt                                        <  1:496223/140‑1 (MQ=255)                                                                                                  ggTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAg                                      <  2:702157/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGTTAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     >  2:870124/1‑140 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  1:870124/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:844940/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:702770/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:677226/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:453077/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:202959/140‑1 (MQ=255)                                                                                                   gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt                                     <  2:188784/140‑1 (MQ=255)                                                                                                             cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            <  2:890499/123‑1 (MQ=255)                                                                                                             cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt                                            >  1:890499/1‑123 (MQ=255)                                                                                                             cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTg                           >  2:700983/1‑140 (MQ=255)                                                                                                              gggTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                          >  1:835157/1‑140 (MQ=255)                                                                                                               ggTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTa                         <  2:674795/140‑1 (MQ=255)                                                                                                                 tAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAgg                       >  2:904932/1‑140 (MQ=255)                                                                                                                      gcCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGa                  <  2:901301/140‑1 (MQ=255)                                                                                                                         tGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCTCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg               <  1:859933/140‑1 (MQ=255)                                                                                                                               aaaGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg         <  2:835157/140‑1 (MQ=255)                                                                                                                                      cgATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCa  >  2:126449/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                       CGCTGGGAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCA  >  NC_000913/3650535‑3650808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑