Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,668,544	(C)6→7	coding (645/1398 nt)	ccp ←	cytochrome c peroxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,668,538	1	.	C	96.3%	284.5 / 3.1	82	coding (651/1398 nt)	ccp	cytochrome c peroxidase
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base C (45/34);  total (46/36)
Fisher's exact test for biased strand distribution p-value = 5.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01

GTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCT  >  NC_000913/3668399‑3668668                                                                                                                                              |                                                                                                                                     gTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑Cg                                                                                                                                       <  1:494144/140‑1 (MQ=255)        aGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑ccc‑cccc                                                                                                                             <  2:379011/140‑2 (MQ=255)             gATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCAtt                                                                                                                         <  1:72626/140‑1 (MQ=255)              aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTc                                                                                                                        >  1:794694/1‑140 (MQ=255)              aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTc                                                                                                                        >  1:485253/1‑140 (MQ=255)              aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTc                                                                                                                        >  1:771809/1‑140 (MQ=255)                    cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCa                                                                                                                  >  1:316843/1‑140 (MQ=255)                        gTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGc                                                                                                              >  1:929987/1‑140 (MQ=255)                         ttcccGCAAGACCATCCCCGAACTGCTGAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCa                                                                                                             >  2:784060/4‑140 (MQ=255)                         ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCa                                                                                                             >  1:790839/1‑140 (MQ=255)                         ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCa                                                                                                             >  2:295875/1‑140 (MQ=255)                                 cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGc                                                                                                                   <  1:386542/126‑1 (MQ=255)                                 cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGc                                                                                                                   >  2:386542/1‑126 (MQ=255)                                      aTCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGaa                                                                                                <  2:929987/140‑1 (MQ=255)                                       tCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                               <  2:619722/140‑1 (MQ=255)                                             aaCTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGc                                                                                         >  1:411744/1‑140 (MQ=255)                                                  cTCATCGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGCCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACCC‑‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:679270/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                               <  1:962584/129‑1 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                               >  2:962584/1‑129 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATgg                                                                                            <  1:782994/132‑1 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATgg                                                                                            >  2:782994/1‑132 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCt                                                                                        >  1:961660/1‑136 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCt                                                                                        <  2:961660/136‑1 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc                                                                                     >  1:344334/1‑139 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc                                                                                     <  2:344334/139‑1 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:230669/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:982692/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:487842/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:859672/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:567535/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:324046/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:636828/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:342872/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:474338/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:608049/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  1:554524/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                    >  2:3996/1‑140 (MQ=255)                                                  cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAg                                                                                   >  1:633517/1‑140 (MQ=255)                                                       cGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCATTGAGCGCATGAAATGGTGCTATCAGCCGa                                                                               <  2:771809/140‑1 (MQ=255)                                                           aaaTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaaa                                                                           <  2:71695/140‑1 (MQ=255)                                                             aTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg                                                                         <  1:784060/140‑1 (MQ=255)                                                              tACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:633517/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:342872/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:556083/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:794694/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:859672/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:3996/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:474338/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:636828/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:920309/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑CCCACCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:851295/140‑1 (MQ=255)                                                               aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAAACGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:485253/140‑1 (MQ=255)                                                                 tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:712593/138‑1 (MQ=255)                                                                 tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       >  2:712593/1‑138 (MQ=255)                                                                 tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                     >  1:230980/1‑140 (MQ=255)                                                                        aaTACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  1:888150/131‑1 (MQ=255)                                                                        aaTACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       >  2:888150/1‑131 (MQ=255)                                                                         aTACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATa                                                             >  1:894561/1‑140 (MQ=255)                                                                           aCCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACa                                                           <  1:567535/140‑1 (MQ=255)                                                                             cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:276360/126‑1 (MQ=255)                                                                             cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       >  1:276360/1‑126 (MQ=255)                                                                             cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                         >  2:46487/1‑140 (MQ=255)                                                                               tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:399194/124‑1 (MQ=255)                                                                               tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       <  2:848370/124‑1 (MQ=255)                                                                               tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       >  1:848370/1‑124 (MQ=255)                                                                               tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                       >  1:399194/1‑124 (MQ=255)                                                                               tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                       >  1:240379/1‑140 (MQ=255)                                                                                 ggCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCaa                                                     >  2:91268/1‑140 (MQ=255)                                                                                  gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCaa                                                     <  2:95413/139‑1 (MQ=255)                                                                                  gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCaa                                                     >  1:95413/1‑139 (MQ=255)                                                                                         aaTCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAAc                                             <  2:487842/140‑1 (MQ=255)                                                                                               cccAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACt                                       >  1:486610/1‑140 (MQ=255)                                                                                               cccAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACt                                       >  1:845810/1‑140 (MQ=255)                                                                                                              aacaccaaTCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTa                        >  1:400367/1‑140 (MQ=255)                                                                                                                    aaTCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                  <  2:240379/140‑1 (MQ=255)                                                                                                                      tCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttt                >  1:644566/1‑140 (MQ=255)                                                                                                                      tCGATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttt                >  1:886184/1‑140 (MQ=255)                                                                                                                        gATGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttttt              <  2:644566/140‑1 (MQ=255)                                                                                                                          tGTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGc            >  1:40016/1‑140 (MQ=255)                                                                                                                           gTTTTTCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCg           >  1:485903/1‑140 (MQ=255)                                                                                                                             ttttCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg         <  2:845810/140‑1 (MQ=255)                                                                                                                             ttttCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg         <  2:486610/140‑1 (MQ=255)                                                                                                                              tttCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAACCGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGa        <  2:894561/140‑1 (MQ=255)                                                                                                                              tttCTGCCATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGa        <  2:316843/140‑1 (MQ=255)                                                                                                                                tCTGCCATCGA‑CGCCCCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGAt       >  2:174557/1‑140 (MQ=255)                                                                                                                                    ccATCGA‑CGC‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCt  >  2:676065/1‑140 (MQ=255)                                                                                                                                              |                                                                                                                                     GTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGA‑CG‑‑CCC‑CCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCT  >  NC_000913/3668399‑3668668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑