| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,288,561 | (C)7→8 | pseudogene (354/2525 nt) | yejO ← | adhesin‑like autotransporter YejO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,288,554 | 1 | . | C | 98.7% | 261.0 / ‑3.4 | 75 | pseudogene (361/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (38/36); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
ACCGAGACGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGTCCTCCCTTTTCGATAGCGACAAAGACG‑G‑CCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCG > NC_000913/2288415‑2288688 | aCCGAGACGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACg‑g > 1:773199/1‑140 (MQ=255)aCCGAGACGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACg‑g > 2:562507/1‑140 (MQ=255)aCCGAGACGGTTTGTTCCAAATACCTCCATGGCCCGCGTGGTTTTTTTAATAGCCCCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACg‑g < 2:420978/140‑1 (MQ=255) ccGAGACGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑c < 1:229680/140‑1 (MQ=255) aCGTTTTGTCCCGAATCCCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccc < 2:917713/140‑1 (MQ=255) aCGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccc < 2:330297/140‑1 (MQ=255) ggTTTGTTCCGAATCCCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccccc < 1:733966/140‑2 (MQ=255) ggTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccccc < 1:246947/140‑2 (MQ=255) tttGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑ccccccccat > 2:78365/1‑137 (MQ=255) ttCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCttt > 1:145704/1‑140 (MQ=255) ttCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccccc > 1:28009/1‑133 (MQ=255) ttCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑G‑cccccccc < 2:28009/134‑2 (MQ=255) ggCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAgcgc < 2:18661/140‑1 (MQ=255) gCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGcgcc < 2:215517/140‑1 (MQ=255) cccGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGcgccc < 2:758151/140‑1 (MQ=255) cgcgTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGcgcccgc > 1:439175/1‑140 (MQ=255) ttgttTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAAt < 2:103997/140‑1 (MQ=255) gttTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCg < 2:773199/140‑1 (MQ=255) aTAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTAt > 2:351064/1‑140 (MQ=255) cACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCAtt > 1:775143/1‑140 (MQ=255) aCCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTc > 2:127699/1‑140 (MQ=255) aCCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTc > 1:54024/1‑140 (MQ=255) aCCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTc > 1:206992/1‑140 (MQ=255) ccGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCg < 2:618124/140‑1 (MQ=255) ccGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCg > 2:972890/1‑140 (MQ=255) ccttgttttTGATCTACCCCAAAAGCAAAACCCCCCCCTTTAACCCCCAGTAGCCCCCCCTTTTCGAAAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg < 2:286549/135‑1 (MQ=255) ccTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGTGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg > 1:575282/1‑140 (MQ=255) ccTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg < 2:206992/140‑1 (MQ=255) ccTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg < 2:775143/140‑1 (MQ=255) gCTTTCTGATCTGCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTgcgc > 1:177545/1‑140 (MQ=255) tttCTGATCTGCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCa < 2:177545/140‑1 (MQ=255) cTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCCCTGCGCCATaa > 1:286549/1‑140 (MQ=255) aTCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCg > 2:906094/1‑126 (MQ=255) aTCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCg < 1:906094/126‑1 (MQ=255) tACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACGCC‑CCCCCCCATCTTTTTCAACGATTAACCGCCCGCCTTTAATCGTGGTATCTTTCGCTCCGCCATAAACCtct > 2:384990/1‑138 (MQ=255) tACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGt > 1:396311/1‑140 (MQ=255) aCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg < 1:204953/125‑1 (MQ=255) aCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTg > 2:204953/1‑125 (MQ=255) aCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATaa < 1:687970/133‑1 (MQ=255) aCCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATaa > 2:687970/1‑133 (MQ=255) cGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGc > 2:454717/1‑140 (MQ=255) gcaaatgcaaatCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGca < 2:54024/140‑1 (MQ=255) gcaaatgcaaatCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGca < 1:581550/140‑1 (MQ=255) ccaaatgcaaatCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGca < 2:770119/139‑1 (MQ=255) ccaaatgcaaacCCCCCCTCTTTACCCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGca < 2:637372/139‑1 (MQ=255) caaatgcaaatCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGcac < 2:145704/140‑1 (MQ=255) aatgcaaatCCCCCCTCTTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCacac > 1:534428/1‑140 (MQ=255) ctctTTAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTa > 1:159459/1‑140 (MQ=255) tttAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTc > 2:285612/1‑140 (MQ=255) tttAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTc < 1:351064/140‑1 (MQ=255) tAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTa < 1:274148/135‑1 (MQ=255) tAACCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTa > 2:274148/1‑135 (MQ=255) aaCCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTgg > 1:339581/1‑140 (MQ=255) aCCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTTCGCCATAAACCTGTAGCACACCATTATTGa > 2:919565/1‑128 (MQ=255) aCCTCCAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGa < 1:919565/128‑1 (MQ=255) ccAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCg > 2:119576/1‑127 (MQ=255) ccAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCg < 1:119576/127‑1 (MQ=255) ccAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGc > 2:860303/1‑140 (MQ=255) cAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGcc > 1:430786/1‑140 (MQ=255) cAGTAGCCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGcc > 2:462777/1‑140 (MQ=255) agtagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcg > 2:776197/1‑140 (MQ=255) agtagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcg < 1:127699/140‑1 (MQ=255) agtagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcg > 1:460254/1‑140 (MQ=255) agtagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcg > 1:615330/1‑140 (MQ=255) agtagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcg > 2:338652/1‑140 (MQ=255) tagcCCTCCCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCcgcg < 2:615330/140‑1 (MQ=255) ccctccCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCa < 2:534428/139‑1 (MQ=255) ccctccCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCa < 2:396311/139‑1 (MQ=255) ccctccCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCa > 1:418806/2‑140 (MQ=255) ccctccCTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCa < 1:384990/139‑1 (MQ=255) cccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCa > 2:840649/1‑140 (MQ=255) cccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCa > 1:3677/1‑140 (MQ=255) cccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCa > 1:140988/1‑140 (MQ=255) ccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCAt < 1:562507/140‑1 (MQ=255) ccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCAt < 1:69471/140‑1 (MQ=255) ccTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCAt > 1:346933/1‑140 (MQ=255) cTTTTCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCAtt > 1:283498/1‑140 (MQ=255) ttCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCAAACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGa > 2:913179/1‑140 (MQ=255) tCGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGaa < 1:285612/140‑1 (MQ=255) cGATAGCGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAAc < 1:572244/140‑1 (MQ=255) cGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTg < 2:979340/131‑1 (MQ=255) cGACAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTg > 1:979340/1‑131 (MQ=255) aCAAAGACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGAt < 1:840649/140‑1 (MQ=255) gACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCg < 2:39765/140‑1 (MQ=255) gACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCg < 1:972890/140‑1 (MQ=255) gACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCg < 1:860303/140‑1 (MQ=255) gACG‑GCCCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCg < 1:462777/140‑1 (MQ=255) | ACCGAGACGGTTTGTTCCGAATACCTCCATGGCCCGCGTGGTTGTTTTAATAGCACCGCCTGCTTTCTGATCTACCGCAAATGCAAATCCCCCCTCTTTAACCTCCAGTAGTCCTCCCTTTTCGATAGCGACAAAGACG‑G‑CCCCCCCATCTTTTTCAACGATTAAGCGCCCGCCTTTAATCGTGGTATCATTCGCTGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCG > NC_000913/2288415‑2288688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |